RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 PAK6Q9NQU5 681 aaPredicted RBP14.82□□□□□ -0.04
SPG11-219ENST00000559822 GJD2Q9UKL4 321 aa14.82□□□□□ -0.04
SPG11-219ENST00000559822 DOCK3Q8IZD9 2030 aa14.82□□□□□ -0.04
SPG11-219ENST00000559822 TCRBV5S4A2TA0A5A2 114 aa14.81□□□□□ -0.04
SPG11-219ENST00000559822 TFRCP02786 760 aaKnown RBP14.81□□□□□ -0.04
SPG11-219ENST00000559822 ERVK-9P63128 1117 aa14.81□□□□□ -0.04
SPG11-219ENST00000559822 ERVK-24P63145 666 aa14.81□□□□□ -0.04
SPG11-219ENST00000559822 CCNA1P78396 465 aa14.81□□□□□ -0.04
SPG11-219ENST00000559822 GABPAQ06546 454 aa14.81□□□□□ -0.04
SPG11-219ENST00000559822 ZYXQ15942 572 aaKnown RBP14.81□□□□□ -0.04
SPG11-219ENST00000559822 UBE2Q1Q7Z7E8 422 aa14.81□□□□□ -0.04
SPG11-219ENST00000559822 DDRGK1Q96HY6 314 aa14.81□□□□□ -0.04
SPG11-219ENST00000559822 HAUS7Q99871 368 aa14.81□□□□□ -0.04
SPG11-219ENST00000559822 PAGR1Q9BTK6 254 aa14.81□□□□□ -0.04
SPG11-219ENST00000559822 DCP1AQ9NPI6 582 aaPredicted RBP14.81□□□□□ -0.04
SPG11-219ENST00000559822 ATP8A2Q9NTI2 1148 aa14.81□□□□□ -0.04
SPG11-219ENST00000559822 SWAP70Q9UH65 585 aa14.81□□□□□ -0.04
SPG11-219ENST00000559822 H0YGN5 161 aa14.8□□□□□ -0.04
SPG11-219ENST00000559822 MPHOSPH10O00566 681 aaKnown RBP14.8□□□□□ -0.04
SPG11-219ENST00000559822 XRCC5P13010 732 aaKnown RBP14.8□□□□□ -0.04
SPG11-219ENST00000559822 ADD2P35612 726 aa14.8□□□□□ -0.04
SPG11-219ENST00000559822 LCORLQ8N3X6 602 aa14.8□□□□□ -0.04
SPG11-219ENST00000559822 SDR42E1Q8WUS8 393 aa14.8□□□□□ -0.04
SPG11-219ENST00000559822 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.8□□□□□ -0.04
SPG11-219ENST00000559822 TXNRD2Q9NNW7 524 aa14.8□□□□□ -0.04
SPG11-219ENST00000559822 HMX1Q9NP08 348 aaPredicted RBP14.8□□□□□ -0.04
SPG11-219ENST00000559822 RBPJLQ9UBG7 517 aa14.8□□□□□ -0.04
SPG11-219ENST00000559822 RABGAP1Q9Y3P9 1069 aa14.8□□□□□ -0.04
SPG11-219ENST00000559822 NR2E3Q9Y5X4 410 aa14.8□□□□□ -0.04
SPG11-219ENST00000559822 RPTORQ8N122 1335 aa14.8□□□□□ -0.04
SPG11-219ENST00000559822 GLRX3O76003 335 aaKnown RBP14.79□□□□□ -0.04
SPG11-219ENST00000559822 MBD4O95243 580 aa14.79□□□□□ -0.04
SPG11-219ENST00000559822 VCAM1P19320 739 aa14.79□□□□□ -0.04
SPG11-219ENST00000559822 UBE3CQ15386 1083 aa14.79□□□□□ -0.04
SPG11-219ENST00000559822 CATSPERGQ6ZRH7 1159 aa14.79□□□□□ -0.04
SPG11-219ENST00000559822 ANKLE1Q8NAG6 615 aa14.79□□□□□ -0.04
SPG11-219ENST00000559822 EDC3Q96F86 508 aaKnown RBP14.79□□□□□ -0.04
SPG11-219ENST00000559822 GPATCH3Q96I76 525 aa14.79□□□□□ -0.04
SPG11-219ENST00000559822 ARMT1Q9H993 441 aa14.79□□□□□ -0.04
SPG11-219ENST00000559822 ZKSCAN1P17029 563 aaPredicted RBP14.78□□□□□ -0.04
SPG11-219ENST00000559822 CYP2B6P20813 491 aa14.78□□□□□ -0.04
SPG11-219ENST00000559822 RGS2P41220 211 aa14.78□□□□□ -0.04
SPG11-219ENST00000559822 C20orf194Q5TEA3 1177 aa14.78□□□□□ -0.04
SPG11-219ENST00000559822 LBX2Q6XYB7 198 aa14.78□□□□□ -0.04
SPG11-219ENST00000559822 TMEM179Q6ZVK1 233 aa14.78□□□□□ -0.04
SPG11-219ENST00000559822 GPR142Q7Z601 462 aa14.78□□□□□ -0.04
SPG11-219ENST00000559822 PLEKHH3Q7Z736 793 aa14.78□□□□□ -0.04
SPG11-219ENST00000559822 CRISPLD2Q9H0B8 497 aa14.78□□□□□ -0.04
SPG11-219ENST00000559822 SH2D4AQ9H788 454 aa14.78□□□□□ -0.04
SPG11-219ENST00000559822 MYH7P12883 1935 aa14.77□□□□□ -0.04
SPG11-219ENST00000559822 SEPT2Q15019 361 aa14.77□□□□□ -0.05
SPG11-219ENST00000559822 NECAB2Q7Z6G3 386 aa14.77□□□□□ -0.05
SPG11-219ENST00000559822 ACER1Q8TDN7 264 aa14.77□□□□□ -0.05
SPG11-219ENST00000559822 APBA2Q99767 749 aa14.77□□□□□ -0.05
SPG11-219ENST00000559822 PORCNQ9H237 461 aa14.77□□□□□ -0.05
SPG11-219ENST00000559822 RPAP3Q9H6T3 665 aaPredicted RBP14.77□□□□□ -0.05
SPG11-219ENST00000559822 ECHDC1Q9NTX5 307 aa14.77□□□□□ -0.05
SPG11-219ENST00000559822 CEP290O15078 2479 aa14.77□□□□□ -0.05
SPG11-219ENST00000559822 PLXNB2O15031 1838 aa14.77□□□□□ -0.05
SPG11-219ENST00000559822 MYH8P13535 1937 aa14.76□□□□□ -0.05
SPG11-219ENST00000559822 PRKAR2AP13861 404 aaKnown RBP14.76□□□□□ -0.05
SPG11-219ENST00000559822 GUCY1A2P33402 732 aa14.76□□□□□ -0.05
SPG11-219ENST00000559822 Q3C1V9 767 aa14.76□□□□□ -0.05
SPG11-219ENST00000559822 MORN1Q5T089 497 aa14.76□□□□□ -0.05
SPG11-219ENST00000559822 TRIB2Q92519 343 aa14.76□□□□□ -0.05
SPG11-219ENST00000559822 LPAR1Q92633 364 aa14.76□□□□□ -0.05
SPG11-219ENST00000559822 CCDC17Q96LX7 622 aa14.76□□□□□ -0.05
SPG11-219ENST00000559822 ARHGEF10LQ9HCE6 1279 aa14.76□□□□□ -0.05
SPG11-219ENST00000559822 COLQQ9Y215 455 aaPredicted RBP14.76□□□□□ -0.05
SPG11-219ENST00000559822 IVNS1ABPQ9Y6Y0 642 aa14.76□□□□□ -0.05
SPG11-219ENST00000559822 EVI5O60447 810 aa14.75□□□□□ -0.05
SPG11-219ENST00000559822 PEX10O60683 326 aa14.75□□□□□ -0.05
SPG11-219ENST00000559822 MAP3K21Q5TCX8 1036 aa14.75□□□□□ -0.05
SPG11-219ENST00000559822 C12orf60Q5U649 245 aa14.75□□□□□ -0.05
SPG11-219ENST00000559822 WDR78Q5VTH9 848 aa14.75□□□□□ -0.05
SPG11-219ENST00000559822 USP6NLQ92738 828 aa14.75□□□□□ -0.05
SPG11-219ENST00000559822 HOXC10Q9NYD6 342 aa14.75□□□□□ -0.05
SPG11-219ENST00000559822 SLC4A4Q9Y6R1 1079 aa14.75□□□□□ -0.05
SPG11-219ENST00000559822 SLC15A5A6NIM6 579 aa14.74□□□□□ -0.05
SPG11-219ENST00000559822 SPDYE16A6NNV3 312 aaPredicted RBP14.74□□□□□ -0.05
SPG11-219ENST00000559822 PRKAB2O43741 272 aa14.74□□□□□ -0.05
SPG11-219ENST00000559822 SMARCA5O60264 1052 aaPredicted RBP14.74□□□□□ -0.05
SPG11-219ENST00000559822 CNMDO75829 334 aa14.74□□□□□ -0.05
SPG11-219ENST00000559822 CYP2D6P10635 497 aa14.74□□□□□ -0.05
SPG11-219ENST00000559822 ICA1Q05084 483 aa14.74□□□□□ -0.05
SPG11-219ENST00000559822 TRIM32Q13049 653 aa14.74□□□□□ -0.05
SPG11-219ENST00000559822 MAP2K5Q13163 448 aa14.74□□□□□ -0.05
SPG11-219ENST00000559822 COG2Q14746 738 aa14.74□□□□□ -0.05
SPG11-219ENST00000559822 LRRFIP1Q32MZ4 808 aaKnown RBP14.74□□□□□ -0.05
SPG11-219ENST00000559822 CHRDL2Q6WN34 429 aa14.74□□□□□ -0.05
SPG11-219ENST00000559822 MB21D1Q8N884 522 aa14.74□□□□□ -0.05
SPG11-219ENST00000559822 SLC44A5Q8NCS7 719 aa14.74□□□□□ -0.05
SPG11-219ENST00000559822 DYNLL2Q96FJ2 89 aa14.74□□□□□ -0.05
SPG11-219ENST00000559822 PAWRQ96IZ0 340 aaKnown RBP14.74□□□□□ -0.05
SPG11-219ENST00000559822 TANGO6Q9C0B7 1094 aa14.74□□□□□ -0.05
SPG11-219ENST00000559822 DCTPP1Q9H773 170 aa14.74□□□□□ -0.05
SPG11-219ENST00000559822 ARPP21Q9UBL0 812 aaPredicted RBP14.74□□□□□ -0.05
SPG11-219ENST00000559822 BAZ2AQ9UIF9 1905 aaKnown RBP14.73□□□□□ -0.05
SPG11-219ENST00000559822 A0A1W2PRG0 241 aa14.73□□□□□ -0.05
SPG11-219ENST00000559822 USP17L12C9JPN9 530 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms