RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 FLRT1Q9NZU1 646 aa13.57□□□□□ -0.24
HERC1-204ENST00000559715 SHMT1P34896 483 aa13.56□□□□□ -0.24
HERC1-204ENST00000559715 PLCD1P51178 756 aa13.56□□□□□ -0.24
HERC1-204ENST00000559715 GABPAQ06546 454 aa13.56□□□□□ -0.24
HERC1-204ENST00000559715 CEP85Q6P2H3 762 aa13.56□□□□□ -0.24
HERC1-204ENST00000559715 C7orf61Q8IZ16 206 aa13.56□□□□□ -0.24
HERC1-204ENST00000559715 NOL10Q9BSC4 688 aaKnown RBP13.56□□□□□ -0.24
HERC1-204ENST00000559715 ZMYND8Q9ULU4 1186 aaPredicted RBP13.56□□□□□ -0.24
HERC1-204ENST00000559715 NAV1Q8NEY1 1877 aa13.56□□□□□ -0.24
HERC1-204ENST00000559715 ZNFX1Q9P2E3 1918 aaKnown RBP13.56□□□□□ -0.24
HERC1-204ENST00000559715 A0A0G2JMZ2 1700 aa13.56□□□□□ -0.24
HERC1-204ENST00000559715 MAPK4P31152 587 aa13.55□□□□□ -0.24
HERC1-204ENST00000559715 USP17L2Q6R6M4 530 aa13.55□□□□□ -0.24
HERC1-204ENST00000559715 LBX2Q6XYB7 198 aa13.55□□□□□ -0.24
HERC1-204ENST00000559715 CATSPERGQ6ZRH7 1159 aa13.55□□□□□ -0.24
HERC1-204ENST00000559715 CRACR2BQ8N4Y2 399 aaPredicted RBP13.55□□□□□ -0.24
HERC1-204ENST00000559715 MAGEB6Q8N7X4 407 aa13.55□□□□□ -0.24
HERC1-204ENST00000559715 SOCS4Q8WXH5 440 aa13.55□□□□□ -0.24
HERC1-204ENST00000559715 KIAA1683Q9H0B3 1180 aa13.55□□□□□ -0.24
HERC1-204ENST00000559715 C11orf49Q9H6J7 331 aa13.55□□□□□ -0.24
HERC1-204ENST00000559715 BTBD7Q9P203 1132 aa13.55□□□□□ -0.24
HERC1-204ENST00000559715 RABGAP1Q9Y3P9 1069 aa13.55□□□□□ -0.24
HERC1-204ENST00000559715 SMCHD1A6NHR9 2005 aa13.55□□□□□ -0.24
HERC1-204ENST00000559715 IDH1O75874 414 aaKnown RBP13.54□□□□□ -0.24
HERC1-204ENST00000559715 SYN1P17600 705 aa13.54□□□□□ -0.24
HERC1-204ENST00000559715 MAGEA10P43363 369 aaPredicted RBP13.54□□□□□ -0.24
HERC1-204ENST00000559715 PLEKHH3Q7Z736 793 aa13.54□□□□□ -0.24
HERC1-204ENST00000559715 SERPINB13Q9UIV8 391 aa13.54□□□□□ -0.24
HERC1-204ENST00000559715 BAZ2AQ9UIF9 1905 aaKnown RBP13.54□□□□□ -0.24
HERC1-204ENST00000559715 ZNF236Q9UL36 1845 aa13.53□□□□□ -0.24
HERC1-204ENST00000559715 CHD9Q3L8U1 2897 aa13.53□□□□□ -0.24
HERC1-204ENST00000559715 A0A1W2PRG0 241 aa13.53□□□□□ -0.24
HERC1-204ENST00000559715 TCRBV5S4A2TA0A5A2 114 aa13.53□□□□□ -0.24
HERC1-204ENST00000559715 USP17L15C9J2P7 530 aa13.53□□□□□ -0.24
HERC1-204ENST00000559715 USP17L13C9JLJ4 530 aa13.53□□□□□ -0.24
HERC1-204ENST00000559715 USP17L11C9JVI0 530 aa13.53□□□□□ -0.24
HERC1-204ENST00000559715 USP17L18D6R9N7 530 aa13.53□□□□□ -0.24
HERC1-204ENST00000559715 USP17L22D6RA61 530 aa13.53□□□□□ -0.24
HERC1-204ENST00000559715 USP17L17D6RBQ6 530 aa13.53□□□□□ -0.24
HERC1-204ENST00000559715 USP17L19D6RCP7 530 aa13.53□□□□□ -0.24
HERC1-204ENST00000559715 USP17L20D6RJB6 530 aa13.53□□□□□ -0.24
HERC1-204ENST00000559715 HOXC6P09630 235 aa13.53□□□□□ -0.24
HERC1-204ENST00000559715 VCAM1P19320 739 aa13.53□□□□□ -0.24
HERC1-204ENST00000559715 USP17L24Q0WX57 530 aa13.53□□□□□ -0.24
HERC1-204ENST00000559715 MAP2K5Q13163 448 aa13.53□□□□□ -0.24
HERC1-204ENST00000559715 OS9Q13438 667 aaPredicted RBP13.53□□□□□ -0.24
HERC1-204ENST00000559715 LRRC26Q2I0M4 334 aa13.53□□□□□ -0.24
HERC1-204ENST00000559715 LRIT3Q3SXY7 679 aa13.53□□□□□ -0.24
HERC1-204ENST00000559715 KIAA1755Q5JYT7 1200 aa13.53□□□□□ -0.24
HERC1-204ENST00000559715 GPR153Q6NV75 609 aa13.53□□□□□ -0.24
HERC1-204ENST00000559715 SIAH1Q8IUQ4 282 aa13.53□□□□□ -0.24
HERC1-204ENST00000559715 TRPV1Q8NER1 839 aa13.53□□□□□ -0.24
HERC1-204ENST00000559715 PAGR1Q9BTK6 254 aa13.53□□□□□ -0.24
HERC1-204ENST00000559715 EXOC6BQ9Y2D4 811 aa13.53□□□□□ -0.24
HERC1-204ENST00000559715 LTBP2Q14767 1821 aa13.53□□□□□ -0.24
HERC1-204ENST00000559715 MYH8P13535 1937 aa13.52□□□□□ -0.24
HERC1-204ENST00000559715 SPDYE16A6NNV3 312 aaPredicted RBP13.52□□□□□ -0.25
HERC1-204ENST00000559715 SMIM22K7EJ46 135 aa13.52□□□□□ -0.25
HERC1-204ENST00000559715 HLA-DOAP06340 250 aa13.52□□□□□ -0.25
HERC1-204ENST00000559715 ZKSCAN1P17029 563 aaPredicted RBP13.52□□□□□ -0.25
HERC1-204ENST00000559715 PTPREP23469 700 aa13.52□□□□□ -0.25
HERC1-204ENST00000559715 RGS2P41220 211 aa13.52□□□□□ -0.25
HERC1-204ENST00000559715 ZYXQ15942 572 aaKnown RBP13.52□□□□□ -0.25
HERC1-204ENST00000559715 CERKLQ49MI3 558 aaPredicted RBP13.52□□□□□ -0.25
HERC1-204ENST00000559715 SIRT2Q8IXJ6 389 aa13.52□□□□□ -0.25
HERC1-204ENST00000559715 TRMT44Q8IYL2 757 aaKnown RBP13.52□□□□□ -0.25
HERC1-204ENST00000559715 NPLOC4Q8TAT6 608 aa13.52□□□□□ -0.25
HERC1-204ENST00000559715 GTF3C2Q8WUA4 911 aaPredicted RBP13.52□□□□□ -0.25
HERC1-204ENST00000559715 APBA2Q99767 749 aa13.52□□□□□ -0.25
HERC1-204ENST00000559715 COL11A1P12107 1806 aaPredicted RBP13.52□□□□□ -0.25
HERC1-204ENST00000559715 MUC3AQ02505 3323 aa13.52□□□□□ -0.25
HERC1-204ENST00000559715 GRB14Q14449 540 aa13.51□□□□□ -0.25
HERC1-204ENST00000559715 ABCB5Q2M3G0 1257 aa13.51□□□□□ -0.25
HERC1-204ENST00000559715 TMED8Q6PL24 325 aaPredicted RBP13.51□□□□□ -0.25
HERC1-204ENST00000559715 Q7L0L9 218 aa13.51□□□□□ -0.25
HERC1-204ENST00000559715 CERS3Q8IU89 383 aa13.51□□□□□ -0.25
HERC1-204ENST00000559715 EDC3Q96F86 508 aaKnown RBP13.51□□□□□ -0.25
HERC1-204ENST00000559715 SLC15A5A6NIM6 579 aa13.5□□□□□ -0.25
HERC1-204ENST00000559715 PDE6AP16499 860 aa13.5□□□□□ -0.25
HERC1-204ENST00000559715 USP5P45974 858 aa13.5□□□□□ -0.25
HERC1-204ENST00000559715 MAP3K12Q12852 859 aa13.5□□□□□ -0.25
HERC1-204ENST00000559715 SEPT2Q15019 361 aa13.5□□□□□ -0.25
HERC1-204ENST00000559715 RAB3GAP1Q15042 981 aa13.5□□□□□ -0.25
HERC1-204ENST00000559715 SLFNL1Q499Z3 407 aa13.5□□□□□ -0.25
HERC1-204ENST00000559715 ITPRIPQ8IWB1 547 aa13.5□□□□□ -0.25
HERC1-204ENST00000559715 TDHQ8IZJ6 230 aa13.5□□□□□ -0.25
HERC1-204ENST00000559715 PANK1Q8TE04 598 aa13.5□□□□□ -0.25
HERC1-204ENST00000559715 MYH7P12883 1935 aa13.5□□□□□ -0.25
HERC1-204ENST00000559715 CYP2D6P10635 497 aa13.49□□□□□ -0.25
HERC1-204ENST00000559715 USP14P54578 494 aa13.49□□□□□ -0.25
HERC1-204ENST00000559715 PDE3AQ14432 1141 aa13.49□□□□□ -0.25
HERC1-204ENST00000559715 TTC6Q86TZ1 520 aa13.49□□□□□ -0.25
HERC1-204ENST00000559715 AACSQ86V21 672 aa13.49□□□□□ -0.25
HERC1-204ENST00000559715 SLC44A5Q8NCS7 719 aa13.49□□□□□ -0.25
HERC1-204ENST00000559715 RHPN1Q8TCX5 695 aa13.49□□□□□ -0.25
HERC1-204ENST00000559715 TRIM34Q9BYJ4 488 aa13.49□□□□□ -0.25
HERC1-204ENST00000559715 RPAP3Q9H6T3 665 aaPredicted RBP13.49□□□□□ -0.25
HERC1-204ENST00000559715 IL1RAPL2Q9NP60 686 aa13.49□□□□□ -0.25
HERC1-204ENST00000559715 DCP1AQ9NPI6 582 aaPredicted RBP13.49□□□□□ -0.25
HERC1-204ENST00000559715 MTMR10Q9NXD2 777 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms