RNA–Protein interactions for RNA: ENST00000559598.6

CRNDE-207, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-207ENST00000559598 NSD2O96028 1365 aa8.43□□□□□ -1.06
CRNDE-207ENST00000559598 USP47Q96K76 1375 aa8.43□□□□□ -1.06
CRNDE-207ENST00000559598 KIF13BQ9NQT8 1826 aa8.43□□□□□ -1.06
CRNDE-207ENST00000559598 DEAF1O75398 565 aaPredicted RBP8.42□□□□□ -1.06
CRNDE-207ENST00000559598 TOMM70O94826 608 aa8.42□□□□□ -1.06
CRNDE-207ENST00000559598 DSC3Q14574 896 aa8.42□□□□□ -1.06
CRNDE-207ENST00000559598 MAP4K3Q8IVH8 894 aa8.42□□□□□ -1.06
CRNDE-207ENST00000559598 ANKRD24Q8TF21 1146 aa8.42□□□□□ -1.06
CRNDE-207ENST00000559598 ASB16Q96NS5 453 aa8.42□□□□□ -1.06
CRNDE-207ENST00000559598 SRA1Q9HD15 236 aaKnown RBP8.42□□□□□ -1.06
CRNDE-207ENST00000559598 C4BP0C0L5 1744 aa8.41□□□□□ -1.06
CRNDE-207ENST00000559598 IGSF1Q8N6C5 1336 aa8.41□□□□□ -1.06
CRNDE-207ENST00000559598 A0A1W2PP55 124 aa8.41□□□□□ -1.06
CRNDE-207ENST00000559598 LINC01387J3KSC0 135 aa8.41□□□□□ -1.06
CRNDE-207ENST00000559598 EPHA1P21709 976 aa8.41□□□□□ -1.06
CRNDE-207ENST00000559598 PLCB3Q01970 1234 aa8.41□□□□□ -1.06
CRNDE-207ENST00000559598 COL23A1Q86Y22 540 aaPredicted RBP8.41□□□□□ -1.06
CRNDE-207ENST00000559598 HOMEZQ8IX15 550 aa8.41□□□□□ -1.06
CRNDE-207ENST00000559598 CCDC74AQ96AQ1 378 aa8.41□□□□□ -1.06
CRNDE-207ENST00000559598 SYTL4Q96C24 671 aaPredicted RBP8.41□□□□□ -1.06
CRNDE-207ENST00000559598 BHLHE41Q9C0J9 482 aaPredicted RBP8.41□□□□□ -1.06
CRNDE-207ENST00000559598 NPHS2Q9NP85 383 aa8.41□□□□□ -1.06
CRNDE-207ENST00000559598 SH2B1Q9NRF2 756 aaPredicted RBP8.41□□□□□ -1.06
CRNDE-207ENST00000559598 PCNTO95613 3336 aa8.41□□□□□ -1.06
CRNDE-207ENST00000559598 CGNL1Q0VF96 1302 aa8.4□□□□□ -1.06
CRNDE-207ENST00000559598 C9orf172C9J069 976 aa8.4□□□□□ -1.06
CRNDE-207ENST00000559598 SELPP16109 830 aa8.4□□□□□ -1.06
CRNDE-207ENST00000559598 SETDB1Q15047 1291 aa8.4□□□□□ -1.06
CRNDE-207ENST00000559598 TXNDC11Q6PKC3 985 aa8.4□□□□□ -1.06
CRNDE-207ENST00000559598 SHISA2Q6UWI4 295 aa8.4□□□□□ -1.06
CRNDE-207ENST00000559598 DNAJC5GQ8N7S2 189 aa8.4□□□□□ -1.06
CRNDE-207ENST00000559598 DDX54Q8TDD1 881 aaKnown RBP8.4□□□□□ -1.06
CRNDE-207ENST00000559598 RGPD2P0DJD1 1756 aa8.4□□□□□ -1.07
CRNDE-207ENST00000559598 TOGARAM1Q9Y4F4 1720 aa8.4□□□□□ -1.07
CRNDE-207ENST00000559598 EDC4Q6P2E9 1401 aaKnown RBP8.39□□□□□ -1.07
CRNDE-207ENST00000559598 SBNO2Q9Y2G9 1366 aa8.39□□□□□ -1.07
CRNDE-207ENST00000559598 BRCA1P38398 1863 aaKnown RBP8.39□□□□□ -1.07
CRNDE-207ENST00000559598 ITGB4P16144 1822 aa8.39□□□□□ -1.07
CRNDE-207ENST00000559598 ARFGEF1Q9Y6D6 1849 aa8.39□□□□□ -1.07
CRNDE-207ENST00000559598 DLL1O00548 723 aa8.39□□□□□ -1.07
CRNDE-207ENST00000559598 CDC25BP30305 580 aa8.39□□□□□ -1.07
CRNDE-207ENST00000559598 PRELPP51888 382 aa8.39□□□□□ -1.07
CRNDE-207ENST00000559598 CABP4P57796 275 aa8.39□□□□□ -1.07
CRNDE-207ENST00000559598 KIAA0319Q5VV43 1072 aa8.39□□□□□ -1.07
CRNDE-207ENST00000559598 JMYQ8N9B5 988 aa8.39□□□□□ -1.07
CRNDE-207ENST00000559598 ASAP3Q8TDY4 903 aa8.39□□□□□ -1.07
CRNDE-207ENST00000559598 BSNDQ8WZ55 320 aa8.39□□□□□ -1.07
CRNDE-207ENST00000559598 LENG1Q96BZ8 264 aaPredicted RBP8.39□□□□□ -1.07
CRNDE-207ENST00000559598 LIN7BQ9HAP6 207 aa8.39□□□□□ -1.07
CRNDE-207ENST00000559598 SOX13Q9UN79 622 aa8.39□□□□□ -1.07
CRNDE-207ENST00000559598 PKD1L3Q7Z443 1732 aa8.39□□□□□ -1.07
CRNDE-207ENST00000559598 TNRC6CQ9HCJ0 1690 aaKnown RBP8.39□□□□□ -1.07
CRNDE-207ENST00000559598 PLEKHG2Q9H7P9 1386 aa8.38□□□□□ -1.07
CRNDE-207ENST00000559598 H3BRJ5 948 aa8.38□□□□□ -1.07
CRNDE-207ENST00000559598 ENOX2Q16206 610 aaKnown RBP8.38□□□□□ -1.07
CRNDE-207ENST00000559598 RSPO4Q2I0M5 234 aaPredicted RBP8.38□□□□□ -1.07
CRNDE-207ENST00000559598 FAM117BQ6P1L5 589 aa8.38□□□□□ -1.07
CRNDE-207ENST00000559598 IGF2-ASQ6U949 168 aa8.38□□□□□ -1.07
CRNDE-207ENST00000559598 CCNJLQ8IV13 435 aa8.38□□□□□ -1.07
CRNDE-207ENST00000559598 IP6K1Q92551 441 aa8.38□□□□□ -1.07
CRNDE-207ENST00000559598 TPSG1Q9NRR2 321 aa8.38□□□□□ -1.07
CRNDE-207ENST00000559598 C10orf71Q711Q0 1435 aa8.37□□□□□ -1.07
CRNDE-207ENST00000559598 KIAA1551Q9HCM1 1747 aa8.37□□□□□ -1.07
CRNDE-207ENST00000559598 PNMA6FA0A0J9YX94 578 aa8.37□□□□□ -1.07
CRNDE-207ENST00000559598 FSCN2O14926 492 aa8.37□□□□□ -1.07
CRNDE-207ENST00000559598 NRG1Q02297 640 aaPredicted RBP8.37□□□□□ -1.07
CRNDE-207ENST00000559598 FMR1Q06787 632 aaKnown RBP eCLIP8.37□□□□□ -1.07
CRNDE-207ENST00000559598 FSTL1Q12841 308 aa8.37□□□□□ -1.07
CRNDE-207ENST00000559598 NKAPLQ5M9Q1 402 aa8.37□□□□□ -1.07
CRNDE-207ENST00000559598 ZMYM1Q5SVZ6 1142 aa8.37□□□□□ -1.07
CRNDE-207ENST00000559598 GALNT11Q8NCW6 608 aa8.37□□□□□ -1.07
CRNDE-207ENST00000559598 ZCRB1Q8TBF4 217 aaKnown RBP8.37□□□□□ -1.07
CRNDE-207ENST00000559598 TCF12Q99081 682 aa8.37□□□□□ -1.07
CRNDE-207ENST00000559598 EHD4Q9H223 541 aa8.37□□□□□ -1.07
CRNDE-207ENST00000559598 MEGF6O75095 1541 aa8.37□□□□□ -1.07
CRNDE-207ENST00000559598 CD163L1Q9NR16 1453 aa8.37□□□□□ -1.07
CRNDE-207ENST00000559598 RTL1A6NKG5 1358 aa8.36□□□□□ -1.07
CRNDE-207ENST00000559598 PALLDQ8WX93 1383 aa8.36□□□□□ -1.07
CRNDE-207ENST00000559598 N4BP2Q86UW6 1770 aaPredicted RBP8.36□□□□□ -1.07
CRNDE-207ENST00000559598 METTL12A8MUP2 240 aa8.36□□□□□ -1.07
CRNDE-207ENST00000559598 ITGB7P26010 798 aa8.36□□□□□ -1.07
CRNDE-207ENST00000559598 ZEB1P37275 1124 aaPredicted RBP8.36□□□□□ -1.07
CRNDE-207ENST00000559598 ADGRE1Q14246 886 aa8.36□□□□□ -1.07
CRNDE-207ENST00000559598 HDGFL2Q7Z4V5 671 aaPredicted RBP8.36□□□□□ -1.07
CRNDE-207ENST00000559598 VN1R5Q7Z5H4 357 aa8.36□□□□□ -1.07
CRNDE-207ENST00000559598 NME9Q86XW9 330 aa8.36□□□□□ -1.07
CRNDE-207ENST00000559598 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.36□□□□□ -1.07
CRNDE-207ENST00000559598 KLHL23Q8NBE8 558 aa8.36□□□□□ -1.07
CRNDE-207ENST00000559598 EPS8L3Q8TE67 593 aaKnown RBP8.36□□□□□ -1.07
CRNDE-207ENST00000559598 WNT8BQ93098 351 aa8.36□□□□□ -1.07
CRNDE-207ENST00000559598 GZF1Q9H116 711 aaPredicted RBP8.36□□□□□ -1.07
CRNDE-207ENST00000559598 SMG6Q86US8 1419 aaKnown RBP8.36□□□□□ -1.07
CRNDE-207ENST00000559598 MAP2P11137 1827 aaKnown RBP8.36□□□□□ -1.07
CRNDE-207ENST00000559598 ROCK2O75116 1388 aaKnown RBP8.35□□□□□ -1.07
CRNDE-207ENST00000559598 TM4SF5O14894 197 aa8.35□□□□□ -1.07
CRNDE-207ENST00000559598 GADD45BO75293 160 aaPredicted RBP8.35□□□□□ -1.07
CRNDE-207ENST00000559598 MAPK8P45983 427 aa8.35□□□□□ -1.07
CRNDE-207ENST00000559598 C16orf71Q8IYS4 520 aaPredicted RBP8.35□□□□□ -1.07
CRNDE-207ENST00000559598 SMARCC1Q92922 1105 aaPredicted RBP8.35□□□□□ -1.07
CRNDE-207ENST00000559598 SEC31BQ9NQW1 1179 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms