RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 USP17L11C9JVI0 530 aa19.85■□□□□ 0.77
CDC42BPB-205ENST00000559245 USP17L18D6R9N7 530 aa19.85■□□□□ 0.77
CDC42BPB-205ENST00000559245 USP17L22D6RA61 530 aa19.85■□□□□ 0.77
CDC42BPB-205ENST00000559245 USP17L17D6RBQ6 530 aa19.85■□□□□ 0.77
CDC42BPB-205ENST00000559245 USP17L19D6RCP7 530 aa19.85■□□□□ 0.77
CDC42BPB-205ENST00000559245 USP17L20D6RJB6 530 aa19.85■□□□□ 0.77
CDC42BPB-205ENST00000559245 USP17L24Q0WX57 530 aa19.85■□□□□ 0.77
CDC42BPB-205ENST00000559245 MAP2K5Q13163 448 aa19.85■□□□□ 0.77
CDC42BPB-205ENST00000559245 LRRC26Q2I0M4 334 aa19.85■□□□□ 0.77
CDC42BPB-205ENST00000559245 TATDN1Q6P1N9 297 aa19.85■□□□□ 0.77
CDC42BPB-205ENST00000559245 MIGA1Q8NAN2 632 aa19.85■□□□□ 0.77
CDC42BPB-205ENST00000559245 FEZ1Q99689 392 aa19.85■□□□□ 0.77
CDC42BPB-205ENST00000559245 DBNLQ9UJU6 430 aaKnown RBP19.85■□□□□ 0.77
CDC42BPB-205ENST00000559245 CNMDO75829 334 aa19.84■□□□□ 0.77
CDC42BPB-205ENST00000559245 IDH1O75874 414 aaKnown RBP19.84■□□□□ 0.77
CDC42BPB-205ENST00000559245 GLRX3O76003 335 aaKnown RBP19.84■□□□□ 0.77
CDC42BPB-205ENST00000559245 USP5P45974 858 aa19.84■□□□□ 0.77
CDC42BPB-205ENST00000559245 CCNA1P78396 465 aa19.84■□□□□ 0.77
CDC42BPB-205ENST00000559245 EDC3Q96F86 508 aaKnown RBP19.84■□□□□ 0.77
CDC42BPB-205ENST00000559245 CCDC8Q9H0W5 538 aaPredicted RBP19.84■□□□□ 0.77
CDC42BPB-205ENST00000559245 TLR7Q9NYK1 1049 aaKnown RBP19.84■□□□□ 0.77
CDC42BPB-205ENST00000559245 NDUFB9Q9Y6M9 179 aa19.84■□□□□ 0.77
CDC42BPB-205ENST00000559245 USP14P54578 494 aa19.83■□□□□ 0.77
CDC42BPB-205ENST00000559245 RAB3GAP1Q15042 981 aa19.83■□□□□ 0.77
CDC42BPB-205ENST00000559245 WDR78Q5VTH9 848 aa19.83■□□□□ 0.77
CDC42BPB-205ENST00000559245 ZKSCAN2Q63HK3 967 aa19.83■□□□□ 0.77
CDC42BPB-205ENST00000559245 CATSPERGQ6ZRH7 1159 aa19.83■□□□□ 0.77
CDC42BPB-205ENST00000559245 CERS3Q8IU89 383 aa19.83■□□□□ 0.77
CDC42BPB-205ENST00000559245 EHD4Q9H223 541 aa19.83■□□□□ 0.77
CDC42BPB-205ENST00000559245 C1orf115Q9H7X2 142 aa19.83■□□□□ 0.77
CDC42BPB-205ENST00000559245 MTMR10Q9NXD2 777 aa19.83■□□□□ 0.77
CDC42BPB-205ENST00000559245 SERPINB13Q9UIV8 391 aa19.83■□□□□ 0.77
CDC42BPB-205ENST00000559245 STXBP5LQ9Y2K9 1186 aa19.83■□□□□ 0.77
CDC42BPB-205ENST00000559245 NOP58Q9Y2X3 529 aaKnown RBP19.83■□□□□ 0.77
CDC42BPB-205ENST00000559245 RLFQ13129 1914 aa19.82■□□□□ 0.76
CDC42BPB-205ENST00000559245 MDM2Q00987 491 aaPredicted RBP19.82■□□□□ 0.76
CDC42BPB-205ENST00000559245 CERKLQ49MI3 558 aaPredicted RBP19.82■□□□□ 0.76
CDC42BPB-205ENST00000559245 MFSD14CQ5VZR4 134 aa19.82■□□□□ 0.76
CDC42BPB-205ENST00000559245 MAGEB6Q8N7X4 407 aa19.82■□□□□ 0.76
CDC42BPB-205ENST00000559245 KIAA1683Q9H0B3 1180 aa19.82■□□□□ 0.76
CDC42BPB-205ENST00000559245 FLRT1Q9NZU1 646 aa19.82■□□□□ 0.76
CDC42BPB-205ENST00000559245 ZNFX1Q9P2E3 1918 aaKnown RBP19.82■□□□□ 0.76
CDC42BPB-205ENST00000559245 SLC15A5A6NIM6 579 aa19.81■□□□□ 0.76
CDC42BPB-205ENST00000559245 VCAM1P19320 739 aa19.81■□□□□ 0.76
CDC42BPB-205ENST00000559245 PTPREP23469 700 aa19.81■□□□□ 0.76
CDC42BPB-205ENST00000559245 ABCB5Q2M3G0 1257 aa19.81■□□□□ 0.76
CDC42BPB-205ENST00000559245 TTC6Q86TZ1 520 aa19.81■□□□□ 0.76
CDC42BPB-205ENST00000559245 ACER1Q8TDN7 264 aa19.81■□□□□ 0.76
CDC42BPB-205ENST00000559245 EAF2Q96CJ1 260 aaPredicted RBP19.81■□□□□ 0.76
CDC42BPB-205ENST00000559245 LTBP2Q14767 1821 aa19.81■□□□□ 0.76
CDC42BPB-205ENST00000559245 CCER2I3L3R5 266 aa19.8■□□□□ 0.76
CDC42BPB-205ENST00000559245 LBX2Q6XYB7 198 aa19.8■□□□□ 0.76
CDC42BPB-205ENST00000559245 SENP6Q9GZR1 1112 aaPredicted RBP19.8■□□□□ 0.76
CDC42BPB-205ENST00000559245 CABP5Q9NP86 173 aa19.8■□□□□ 0.76
CDC42BPB-205ENST00000559245 BTBD7Q9P203 1132 aa19.8■□□□□ 0.76
CDC42BPB-205ENST00000559245 IVNS1ABPQ9Y6Y0 642 aa19.8■□□□□ 0.76
CDC42BPB-205ENST00000559245 ZNF236Q9UL36 1845 aa19.79■□□□□ 0.76
CDC42BPB-205ENST00000559245 HOXC6P09630 235 aa19.79■□□□□ 0.76
CDC42BPB-205ENST00000559245 ATP2B2Q01814 1243 aa19.79■□□□□ 0.76
CDC42BPB-205ENST00000559245 ANTXR1Q9H6X2 564 aa19.79■□□□□ 0.76
CDC42BPB-205ENST00000559245 DDX20Q9UHI6 824 aaKnown RBP19.79■□□□□ 0.76
CDC42BPB-205ENST00000559245 UNC80Q8N2C7 3258 aa19.78■□□□□ 0.76
CDC42BPB-205ENST00000559245 SPDYE16A6NNV3 312 aaPredicted RBP19.78■□□□□ 0.76
CDC42BPB-205ENST00000559245 MSCO60682 206 aa19.78■□□□□ 0.76
CDC42BPB-205ENST00000559245 CNGA1P29973 690 aa19.78■□□□□ 0.76
CDC42BPB-205ENST00000559245 SHMT1P34896 483 aa19.78■□□□□ 0.76
CDC42BPB-205ENST00000559245 PLCD1P51178 756 aa19.78■□□□□ 0.76
CDC42BPB-205ENST00000559245 MAP3K12Q12852 859 aa19.78■□□□□ 0.76
CDC42BPB-205ENST00000559245 GRB14Q14449 540 aa19.78■□□□□ 0.76
CDC42BPB-205ENST00000559245 NPLOC4Q8TAT6 608 aa19.78■□□□□ 0.76
CDC42BPB-205ENST00000559245 RPAP3Q9H6T3 665 aaPredicted RBP19.78■□□□□ 0.76
CDC42BPB-205ENST00000559245 LAMA2P24043 3122 aaKnown RBP19.78■□□□□ 0.76
CDC42BPB-205ENST00000559245 A0A0G2JMZ2 1700 aa19.78■□□□□ 0.76
CDC42BPB-205ENST00000559245 PARP14Q460N5 1801 aa19.77■□□□□ 0.76
CDC42BPB-205ENST00000559245 CYP2C19P33261 490 aa19.77■□□□□ 0.76
CDC42BPB-205ENST00000559245 LPAR1Q92633 364 aa19.77■□□□□ 0.76
CDC42BPB-205ENST00000559245 SMCHD1A6NHR9 2005 aa19.76■□□□□ 0.75
CDC42BPB-205ENST00000559245 GUCY1A2P33402 732 aa19.76■□□□□ 0.75
CDC42BPB-205ENST00000559245 ATN1P54259 1190 aaPredicted RBP19.76■□□□□ 0.75
CDC42BPB-205ENST00000559245 TMED8Q6PL24 325 aaPredicted RBP19.76■□□□□ 0.75
CDC42BPB-205ENST00000559245 FTSJ3Q8IY81 847 aaKnown RBP19.76■□□□□ 0.75
CDC42BPB-205ENST00000559245 TRPV1Q8NER1 839 aa19.76■□□□□ 0.75
CDC42BPB-205ENST00000559245 LBHD1Q9BQE6 289 aaPredicted RBP19.76■□□□□ 0.75
CDC42BPB-205ENST00000559245 RIOK1Q9BRS2 568 aaKnown RBP19.76■□□□□ 0.75
CDC42BPB-205ENST00000559245 BAZ2AQ9UIF9 1905 aaKnown RBP19.76■□□□□ 0.75
CDC42BPB-205ENST00000559245 COL11A1P12107 1806 aaPredicted RBP19.75■□□□□ 0.75
CDC42BPB-205ENST00000559245 DNM1LO00429 736 aa19.75■□□□□ 0.75
CDC42BPB-205ENST00000559245 POLR3DP05423 398 aaPredicted RBP19.75■□□□□ 0.75
CDC42BPB-205ENST00000559245 SEPT2Q15019 361 aa19.75■□□□□ 0.75
CDC42BPB-205ENST00000559245 ITPRIPQ8IWB1 547 aa19.75■□□□□ 0.75
CDC42BPB-205ENST00000559245 IGHA2P01877 340 aa19.74■□□□□ 0.75
CDC42BPB-205ENST00000559245 GABPAQ06546 454 aa19.74■□□□□ 0.75
CDC42BPB-205ENST00000559245 DPP9Q86TI2 863 aa19.74■□□□□ 0.75
CDC42BPB-205ENST00000559245 AACSQ86V21 672 aa19.74■□□□□ 0.75
CDC42BPB-205ENST00000559245 PLXNA1Q9UIW2 1896 aa19.73■□□□□ 0.75
CDC42BPB-205ENST00000559245 MAGEB6P1A0A0J9YX57 407 aa19.73■□□□□ 0.75
CDC42BPB-205ENST00000559245 POTEB2H3BUK9 544 aa19.73■□□□□ 0.75
CDC42BPB-205ENST00000559245 CYBAP13498 195 aa19.73■□□□□ 0.75
CDC42BPB-205ENST00000559245 RTP1P59025 263 aa19.73■□□□□ 0.75
CDC42BPB-205ENST00000559245 COG2Q14746 738 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms