RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 OTUD7BQ6GQQ9 843 aa22.32■■□□□ 1.16
CASC4-209ENST00000559222 CABP5Q9NP86 173 aa22.32■■□□□ 1.16
CASC4-209ENST00000559222 HIP1O00291 1037 aa22.31■■□□□ 1.16
CASC4-209ENST00000559222 BACE1P56817 501 aa22.31■■□□□ 1.16
CASC4-209ENST00000559222 ALX1Q15699 326 aa22.31■■□□□ 1.16
CASC4-209ENST00000559222 SIAH1Q8IUQ4 282 aa22.31■■□□□ 1.16
CASC4-209ENST00000559222 NKX2-3Q8TAU0 364 aa22.31■■□□□ 1.16
CASC4-209ENST00000559222 TBC1D2Q9BYX2 928 aa22.31■■□□□ 1.16
CASC4-209ENST00000559222 NBPF3Q9H094 633 aa22.31■■□□□ 1.16
CASC4-209ENST00000559222 EMILIN3Q9NT22 766 aa22.31■■□□□ 1.16
CASC4-209ENST00000559222 MYH4Q9Y623 1939 aa22.31■■□□□ 1.16
CASC4-209ENST00000559222 HAND2P61296 217 aa22.3■■□□□ 1.16
CASC4-209ENST00000559222 TMEM179Q6ZVK1 233 aa22.3■■□□□ 1.16
CASC4-209ENST00000559222 FASTKD5Q7L8L6 764 aaKnown RBP22.3■■□□□ 1.16
CASC4-209ENST00000559222 AGTPBP1Q9UPW5 1226 aa22.3■■□□□ 1.16
CASC4-209ENST00000559222 USP17L10C9JJH3 530 aa22.29■■□□□ 1.16
CASC4-209ENST00000559222 KIAA1755Q5JYT7 1200 aa22.29■■□□□ 1.16
CASC4-209ENST00000559222 PROCA1Q8NCQ7 364 aaPredicted RBP22.29■■□□□ 1.16
CASC4-209ENST00000559222 ZFYVE28Q9HCC9 887 aa22.29■■□□□ 1.16
CASC4-209ENST00000559222 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.29■■□□□ 1.16
CASC4-209ENST00000559222 FEZ1Q99689 392 aa22.28■■□□□ 1.16
CASC4-209ENST00000559222 MKNK2Q9HBH9 465 aa22.28■■□□□ 1.16
CASC4-209ENST00000559222 ZCCHC17Q9NP64 241 aaKnown RBP22.28■■□□□ 1.16
CASC4-209ENST00000559222 CPA4Q9UI42 421 aa22.28■■□□□ 1.16
CASC4-209ENST00000559222 ZMYM6O95789 1325 aa22.28■■□□□ 1.16
CASC4-209ENST00000559222 PARP14Q460N5 1801 aa22.27■■□□□ 1.16
CASC4-209ENST00000559222 ECM2O94769 699 aaPredicted RBP22.27■■□□□ 1.16
CASC4-209ENST00000559222 ICA1Q05084 483 aa22.27■■□□□ 1.16
CASC4-209ENST00000559222 FAM47AQ5JRC9 791 aa22.27■■□□□ 1.16
CASC4-209ENST00000559222 TBC1D10CQ8IV04 446 aa22.27■■□□□ 1.16
CASC4-209ENST00000559222 CCDC17Q96LX7 622 aa22.27■■□□□ 1.16
CASC4-209ENST00000559222 ANAPC4Q9UJX5 808 aa22.27■■□□□ 1.16
CASC4-209ENST00000559222 TAOK2Q9UL54 1235 aa22.27■■□□□ 1.16
CASC4-209ENST00000559222 MGAMO43451 1857 aa22.26■■□□□ 1.15
CASC4-209ENST00000559222 RLFQ13129 1914 aa22.26■■□□□ 1.15
CASC4-209ENST00000559222 TLR2O60603 784 aa22.26■■□□□ 1.15
CASC4-209ENST00000559222 FKTNO75072 461 aa22.26■■□□□ 1.15
CASC4-209ENST00000559222 PTH1RQ03431 593 aa22.26■■□□□ 1.15
CASC4-209ENST00000559222 BMP2KLQ5H9B9 411 aa22.26■■□□□ 1.15
CASC4-209ENST00000559222 ERICH6BQ5W0A0 696 aa22.26■■□□□ 1.15
CASC4-209ENST00000559222 CD99L2Q8TCZ2 262 aa22.26■■□□□ 1.15
CASC4-209ENST00000559222 KIAA1683Q9H0B3 1180 aa22.26■■□□□ 1.15
CASC4-209ENST00000559222 IGKV6D-41A0A0C4DH26 115 aa22.25■■□□□ 1.15
CASC4-209ENST00000559222 C19orf81C9J6K1 198 aa22.25■■□□□ 1.15
CASC4-209ENST00000559222 PEX10O60683 326 aa22.25■■□□□ 1.15
CASC4-209ENST00000559222 EEF2P13639 858 aaKnown RBP22.25■■□□□ 1.15
CASC4-209ENST00000559222 MFAP1P55081 439 aaKnown RBP22.25■■□□□ 1.15
CASC4-209ENST00000559222 NOM1Q5C9Z4 860 aaKnown RBP22.25■■□□□ 1.15
CASC4-209ENST00000559222 USP17L2Q6R6M4 530 aa22.25■■□□□ 1.15
CASC4-209ENST00000559222 C17orf99Q6UX52 265 aa22.25■■□□□ 1.15
CASC4-209ENST00000559222 C12orf42Q96LP6 360 aa22.25■■□□□ 1.15
CASC4-209ENST00000559222 TMOD4Q9NZQ9 345 aa22.25■■□□□ 1.15
CASC4-209ENST00000559222 RAD50Q92878 1312 aa22.25■■□□□ 1.15
CASC4-209ENST00000559222 SGSM2O43147 1006 aa22.24■■□□□ 1.15
CASC4-209ENST00000559222 ATP2B2Q01814 1243 aa22.24■■□□□ 1.15
CASC4-209ENST00000559222 PARK7Q99497 189 aaKnown RBP22.24■■□□□ 1.15
CASC4-209ENST00000559222 DSCC1Q9BVC3 393 aa22.24■■□□□ 1.15
CASC4-209ENST00000559222 ARHGAP39Q9C0H5 1083 aa22.24■■□□□ 1.15
CASC4-209ENST00000559222 ASCC2Q9H1I8 757 aaPredicted RBP22.24■■□□□ 1.15
CASC4-209ENST00000559222 SLC45A1Q9Y2W3 748 aa22.24■■□□□ 1.15
CASC4-209ENST00000559222 PLIN4Q96Q06 1357 aa22.24■■□□□ 1.15
CASC4-209ENST00000559222 VCAM1P19320 739 aa22.23■■□□□ 1.15
CASC4-209ENST00000559222 CTGFP29279 349 aa22.23■■□□□ 1.15
CASC4-209ENST00000559222 PDE4BQ07343 736 aa22.23■■□□□ 1.15
CASC4-209ENST00000559222 POTEEQ6S8J3 1075 aa22.23■■□□□ 1.15
CASC4-209ENST00000559222 NEDD4P46934 1319 aa22.23■■□□□ 1.15
CASC4-209ENST00000559222 NMT2O60551 498 aa22.22■■□□□ 1.15
CASC4-209ENST00000559222 BCRP11274 1271 aa22.22■■□□□ 1.15
CASC4-209ENST00000559222 TFAP4Q01664 338 aa22.22■■□□□ 1.15
CASC4-209ENST00000559222 SP3Q02447 781 aa22.22■■□□□ 1.15
CASC4-209ENST00000559222 ZNF444Q8N0Y2 327 aaPredicted RBP22.22■■□□□ 1.15
CASC4-209ENST00000559222 CEP95Q96GE4 821 aa22.22■■□□□ 1.15
CASC4-209ENST00000559222 TMX2Q9Y320 296 aa22.22■■□□□ 1.15
CASC4-209ENST00000559222 A0A0G2JMZ2 1700 aa22.21■■□□□ 1.15
CASC4-209ENST00000559222 SLC3A2P08195 630 aaKnown RBP22.21■■□□□ 1.15
CASC4-209ENST00000559222 FGRP09769 529 aa22.21■■□□□ 1.15
CASC4-209ENST00000559222 SPICE1Q8N0Z3 855 aa22.21■■□□□ 1.15
CASC4-209ENST00000559222 NEDD1Q8NHV4 660 aa22.21■■□□□ 1.15
CASC4-209ENST00000559222 P2RX7Q99572 595 aaKnown RBP22.21■■□□□ 1.15
CASC4-209ENST00000559222 KANSL2Q9H9L4 492 aa22.21■■□□□ 1.15
CASC4-209ENST00000559222 ARHGEF10LQ9HCE6 1279 aa22.21■■□□□ 1.15
CASC4-209ENST00000559222 TAF6LQ9Y6J9 622 aa22.21■■□□□ 1.15
CASC4-209ENST00000559222 ORC4O43929 436 aa22.2■■□□□ 1.14
CASC4-209ENST00000559222 HOXA7P31268 230 aaPredicted RBP22.2■■□□□ 1.14
CASC4-209ENST00000559222 RRP12Q5JTH9 1297 aaKnown RBP22.2■■□□□ 1.14
CASC4-209ENST00000559222 RUFY2Q8WXA3 655 aa22.2■■□□□ 1.14
CASC4-209ENST00000559222 ESYT1Q9BSJ8 1104 aa22.2■■□□□ 1.14
CASC4-209ENST00000559222 MCOLN1Q9GZU1 580 aa22.2■■□□□ 1.14
CASC4-209ENST00000559222 RPAP3Q9H6T3 665 aaPredicted RBP22.2■■□□□ 1.14
CASC4-209ENST00000559222 TSPY3P0CV98 308 aa22.19■■□□□ 1.14
CASC4-209ENST00000559222 TSPY8P0CW00 308 aa22.19■■□□□ 1.14
CASC4-209ENST00000559222 USP14P54578 494 aa22.19■■□□□ 1.14
CASC4-209ENST00000559222 LRRC47Q8N1G4 583 aaKnown RBP22.19■■□□□ 1.14
CASC4-209ENST00000559222 ANKRD13CQ8N6S4 541 aa22.19■■□□□ 1.14
CASC4-209ENST00000559222 SMCR8Q8TEV9 937 aaPredicted RBP22.19■■□□□ 1.14
CASC4-209ENST00000559222 STAG1Q8WVM7 1258 aa22.19■■□□□ 1.14
CASC4-209ENST00000559222 VCPKMTQ9H867 229 aa22.19■■□□□ 1.14
CASC4-209ENST00000559222 IL17RBQ9NRM6 502 aa22.19■■□□□ 1.14
CASC4-209ENST00000559222 TOMM22Q9NS69 142 aa22.19■■□□□ 1.14
CASC4-209ENST00000559222 COL11A1P12107 1806 aaPredicted RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms