RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 CDH24Q86UP0 819 aa6.25□□□□□ -1.41
VPS13C-207ENST00000558919 SPACA3Q8IXA5 215 aa6.25□□□□□ -1.41
VPS13C-207ENST00000558919 AGBL5Q8NDL9 886 aa6.25□□□□□ -1.41
VPS13C-207ENST00000558919 FLCNQ8NFG4 579 aa6.25□□□□□ -1.41
VPS13C-207ENST00000558919 DNAJB8Q8NHS0 232 aa6.25□□□□□ -1.41
VPS13C-207ENST00000558919 PPP1R13LQ8WUF5 828 aa6.25□□□□□ -1.41
VPS13C-207ENST00000558919 KRTAP4-7Q9BYR0 210 aa6.25□□□□□ -1.41
VPS13C-207ENST00000558919 PCDHB14Q9Y5E9 798 aa6.25□□□□□ -1.41
VPS13C-207ENST00000558919 OAS3Q9Y6K5 1087 aaKnown RBP6.25□□□□□ -1.41
VPS13C-207ENST00000558919 CNTNAP4Q9C0A0 1308 aa6.25□□□□□ -1.41
VPS13C-207ENST00000558919 CHURC1-FNTBB4DL54 471 aa6.24□□□□□ -1.41
VPS13C-207ENST00000558919 RACK1P63244 317 aaKnown RBP6.24□□□□□ -1.41
VPS13C-207ENST00000558919 AOC3Q16853 763 aa6.24□□□□□ -1.41
VPS13C-207ENST00000558919 WFDC3Q8IUB2 231 aa6.24□□□□□ -1.41
VPS13C-207ENST00000558919 TP53INP2Q8IXH6 220 aa6.24□□□□□ -1.41
VPS13C-207ENST00000558919 ZNF654Q8IZM8 581 aa6.24□□□□□ -1.41
VPS13C-207ENST00000558919 MFSD4AQ8N468 514 aa6.24□□□□□ -1.41
VPS13C-207ENST00000558919 PAK6Q9NQU5 681 aaPredicted RBP6.24□□□□□ -1.41
VPS13C-207ENST00000558919 KLHL3Q9UH77 587 aa6.24□□□□□ -1.41
VPS13C-207ENST00000558919 PCDHGB7Q9Y5F8 929 aa6.24□□□□□ -1.41
VPS13C-207ENST00000558919 SLC22A31A6NKX4 558 aa6.23□□□□□ -1.41
VPS13C-207ENST00000558919 PRR33A8MZF0 331 aa6.23□□□□□ -1.41
VPS13C-207ENST00000558919 DNAJA2O60884 412 aa6.23□□□□□ -1.41
VPS13C-207ENST00000558919 HDLBPQ00341 1268 aaKnown RBP6.23□□□□□ -1.41
VPS13C-207ENST00000558919 BNIP3Q12983 259 aa6.23□□□□□ -1.41
VPS13C-207ENST00000558919 ASB11Q8WXH4 323 aa6.23□□□□□ -1.41
VPS13C-207ENST00000558919 CCDC74BQ96LY2 380 aa6.23□□□□□ -1.41
VPS13C-207ENST00000558919 GMIPQ9P107 970 aa6.23□□□□□ -1.41
VPS13C-207ENST00000558919 CAPN6Q9Y6Q1 641 aa6.23□□□□□ -1.41
VPS13C-207ENST00000558919 FAM155AB1AL88 458 aaPredicted RBP6.22□□□□□ -1.41
VPS13C-207ENST00000558919 CBX7O95931 251 aa6.22□□□□□ -1.41
VPS13C-207ENST00000558919 CD8BP10966 210 aa6.22□□□□□ -1.41
VPS13C-207ENST00000558919 MCM4P33991 863 aa6.22□□□□□ -1.41
VPS13C-207ENST00000558919 CLCQ05315 142 aa6.22□□□□□ -1.41
VPS13C-207ENST00000558919 LRRFIP1Q32MZ4 808 aaKnown RBP6.22□□□□□ -1.41
VPS13C-207ENST00000558919 GK5Q6ZS86 529 aa6.22□□□□□ -1.41
VPS13C-207ENST00000558919 SPRED2Q7Z698 418 aa6.22□□□□□ -1.41
VPS13C-207ENST00000558919 PHACTR4Q8IZ21 702 aa6.22□□□□□ -1.41
VPS13C-207ENST00000558919 PIWIL2Q8TC59 973 aaKnown RBP6.22□□□□□ -1.41
VPS13C-207ENST00000558919 PODXL2Q9NZ53 605 aa6.22□□□□□ -1.41
VPS13C-207ENST00000558919 RGS13O14921 159 aa6.21□□□□□ -1.42
VPS13C-207ENST00000558919 CDCP2Q5VXM1 449 aa6.21□□□□□ -1.42
VPS13C-207ENST00000558919 ZNF574Q6ZN55 896 aaPredicted RBP6.21□□□□□ -1.42
VPS13C-207ENST00000558919 NT5DC4Q86YG4 428 aa6.21□□□□□ -1.42
VPS13C-207ENST00000558919 ABI1Q8IZP0 508 aa6.21□□□□□ -1.42
VPS13C-207ENST00000558919 RNF141Q8WVD5 230 aa6.21□□□□□ -1.42
VPS13C-207ENST00000558919 SPATA32Q96LK8 384 aa6.21□□□□□ -1.42
VPS13C-207ENST00000558919 ST14Q9Y5Y6 855 aa6.21□□□□□ -1.42
VPS13C-207ENST00000558919 PITPNM2Q9BZ72 1349 aa6.21□□□□□ -1.42
VPS13C-207ENST00000558919 MEIS3P2A8K0S8 358 aa6.2□□□□□ -1.42
VPS13C-207ENST00000558919 FUT4P22083 530 aa6.2□□□□□ -1.42
VPS13C-207ENST00000558919 GBP1P32455 592 aa6.2□□□□□ -1.42
VPS13C-207ENST00000558919 TNNI2P48788 182 aa6.2□□□□□ -1.42
VPS13C-207ENST00000558919 IRAK1P51617 712 aa6.2□□□□□ -1.42
VPS13C-207ENST00000558919 TNK2Q07912 1038 aa6.2□□□□□ -1.42
VPS13C-207ENST00000558919 ARSHQ5FYA8 562 aa6.2□□□□□ -1.42
VPS13C-207ENST00000558919 ANGEL2Q5VTE6 544 aaKnown RBP6.2□□□□□ -1.42
VPS13C-207ENST00000558919 OVOS1Q6IE37 1185 aa6.2□□□□□ -1.42
VPS13C-207ENST00000558919 THAP5Q7Z6K1 395 aa6.2□□□□□ -1.42
VPS13C-207ENST00000558919 BAHD1Q8TBE0 780 aaPredicted RBP6.2□□□□□ -1.42
VPS13C-207ENST00000558919 HSPA12BQ96MM6 686 aa6.2□□□□□ -1.42
VPS13C-207ENST00000558919 KIF2CQ99661 725 aa6.2□□□□□ -1.42
VPS13C-207ENST00000558919 CNNM2Q9H8M5 875 aa6.2□□□□□ -1.42
VPS13C-207ENST00000558919 SEMA3GQ9NS98 782 aa6.2□□□□□ -1.42
VPS13C-207ENST00000558919 ADGRE2Q9UHX3 823 aa6.2□□□□□ -1.42
VPS13C-207ENST00000558919 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.2□□□□□ -1.42
VPS13C-207ENST00000558919 COL17A1Q9UMD9 1497 aaPredicted RBP6.2□□□□□ -1.42
VPS13C-207ENST00000558919 IMPDH2P12268 514 aa6.19□□□□□ -1.42
VPS13C-207ENST00000558919 RAG1P15918 1043 aa6.19□□□□□ -1.42
VPS13C-207ENST00000558919 CCNFP41002 786 aa6.19□□□□□ -1.42
VPS13C-207ENST00000558919 PAK2Q13177 524 aa6.19□□□□□ -1.42
VPS13C-207ENST00000558919 COL9A2Q14055 689 aaPredicted RBP6.19□□□□□ -1.42
VPS13C-207ENST00000558919 CDKAL1Q5VV42 579 aa6.19□□□□□ -1.42
VPS13C-207ENST00000558919 C9orf131Q5VYM1 1079 aa6.19□□□□□ -1.42
VPS13C-207ENST00000558919 CBLL1Q75N03 491 aa6.19□□□□□ -1.42
VPS13C-207ENST00000558919 TMEM40Q8WWA1 233 aa6.19□□□□□ -1.42
VPS13C-207ENST00000558919 ATG4CQ96DT6 458 aa6.19□□□□□ -1.42
VPS13C-207ENST00000558919 Q96M66 194 aa6.19□□□□□ -1.42
VPS13C-207ENST00000558919 KREMEN1Q96MU8 473 aa6.19□□□□□ -1.42
VPS13C-207ENST00000558919 ASPNQ9BXN1 380 aa6.19□□□□□ -1.42
VPS13C-207ENST00000558919 TGIF2Q9GZN2 237 aa6.19□□□□□ -1.42
VPS13C-207ENST00000558919 KCNH3Q9ULD8 1083 aa6.19□□□□□ -1.42
VPS13C-207ENST00000558919 ZNRF3Q9ULT6 936 aa6.19□□□□□ -1.42
VPS13C-207ENST00000558919 CD96P40200 585 aa6.18□□□□□ -1.42
VPS13C-207ENST00000558919 PLCL1Q15111 1095 aa6.18□□□□□ -1.42
VPS13C-207ENST00000558919 NLRC3Q7RTR2 1065 aa6.18□□□□□ -1.42
VPS13C-207ENST00000558919 RASGRP4Q8TDF6 673 aa6.18□□□□□ -1.42
VPS13C-207ENST00000558919 VWCEQ96DN2 955 aa6.18□□□□□ -1.42
VPS13C-207ENST00000558919 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.18□□□□□ -1.42
VPS13C-207ENST00000558919 LMCD1Q9NZU5 365 aa6.18□□□□□ -1.42
VPS13C-207ENST00000558919 H3BS24 57 aa6.17□□□□□ -1.42
VPS13C-207ENST00000558919 TNFRSF10CO14798 259 aa6.17□□□□□ -1.42
VPS13C-207ENST00000558919 UBOX5O94941 541 aa6.17□□□□□ -1.42
VPS13C-207ENST00000558919 NME1P15531 152 aaKnown RBP6.17□□□□□ -1.42
VPS13C-207ENST00000558919 CHMP4BP1P59074 171 aa6.17□□□□□ -1.42
VPS13C-207ENST00000558919 RAD51AP2Q09MP3 1159 aa6.17□□□□□ -1.42
VPS13C-207ENST00000558919 IKZF1Q13422 519 aa6.17□□□□□ -1.42
VPS13C-207ENST00000558919 KRTAP19-1Q8IUB9 90 aa6.17□□□□□ -1.42
VPS13C-207ENST00000558919 DTWD2Q8NBA8 298 aa6.17□□□□□ -1.42
VPS13C-207ENST00000558919 PI4K2BQ8TCG2 481 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms