RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 C9orf78Q9NZ63 289 aaPredicted RBP12.18□□□□□ -0.46
SPG11-212ENST00000558790 GPSM3Q9Y4H4 160 aa12.18□□□□□ -0.46
SPG11-212ENST00000558790 PTCH2Q9Y6C5 1203 aa12.18□□□□□ -0.46
SPG11-212ENST00000558790 CCL15-CCL14A0A0B4J2E2 113 aa12.17□□□□□ -0.46
SPG11-212ENST00000558790 CACNB3P54284 484 aa12.17□□□□□ -0.46
SPG11-212ENST00000558790 WNT7BP56706 349 aa12.17□□□□□ -0.46
SPG11-212ENST00000558790 TAF1CQ15572 869 aaPredicted RBP12.17□□□□□ -0.46
SPG11-212ENST00000558790 CCL15Q16663 113 aa12.17□□□□□ -0.46
SPG11-212ENST00000558790 SLC4A8Q2Y0W8 1093 aa12.17□□□□□ -0.46
SPG11-212ENST00000558790 WDR63Q8IWG1 891 aa12.17□□□□□ -0.46
SPG11-212ENST00000558790 FAM43AQ8N2R8 423 aa12.17□□□□□ -0.46
SPG11-212ENST00000558790 KAZALD1Q96I82 304 aa12.17□□□□□ -0.46
SPG11-212ENST00000558790 SUCLG2Q96I99 432 aa12.17□□□□□ -0.46
SPG11-212ENST00000558790 IQSEC3Q9UPP2 1182 aaPredicted RBP12.17□□□□□ -0.46
SPG11-212ENST00000558790 PHIPQ8WWQ0 1821 aa12.16□□□□□ -0.46
SPG11-212ENST00000558790 ALDH1L1O75891 902 aa12.16□□□□□ -0.46
SPG11-212ENST00000558790 TNNI2P48788 182 aa12.16□□□□□ -0.46
SPG11-212ENST00000558790 GTF2A2P52657 109 aa12.16□□□□□ -0.46
SPG11-212ENST00000558790 CHAF1AQ13111 956 aaPredicted RBP12.16□□□□□ -0.46
SPG11-212ENST00000558790 SLC9C1Q4G0N8 1177 aa12.16□□□□□ -0.46
SPG11-212ENST00000558790 SLC4A10Q6U841 1118 aa12.16□□□□□ -0.46
SPG11-212ENST00000558790 GLMNQ92990 594 aa12.16□□□□□ -0.46
SPG11-212ENST00000558790 SRCIN1Q9C0H9 1055 aa12.16□□□□□ -0.46
SPG11-212ENST00000558790 MRS2Q9HD23 443 aa12.16□□□□□ -0.46
SPG11-212ENST00000558790 PCDHB9Q9Y5E1 797 aa12.16□□□□□ -0.46
SPG11-212ENST00000558790 CSADQ9Y600 493 aa12.16□□□□□ -0.46
SPG11-212ENST00000558790 SNCAIPQ9Y6H5 919 aa12.16□□□□□ -0.46
SPG11-212ENST00000558790 DOCK1Q14185 1865 aa12.16□□□□□ -0.46
SPG11-212ENST00000558790 DOCK3Q8IZD9 2030 aa12.16□□□□□ -0.46
SPG11-212ENST00000558790 MROH5Q6ZUA9 1318 aa12.15□□□□□ -0.46
SPG11-212ENST00000558790 NBPF7P0C2Y1 421 aaPredicted RBP12.15□□□□□ -0.46
SPG11-212ENST00000558790 ZNF697Q5TEC3 545 aa12.15□□□□□ -0.46
SPG11-212ENST00000558790 EHBP1Q8NDI1 1231 aa12.15□□□□□ -0.46
SPG11-212ENST00000558790 SH3TC2Q8TF17 1288 aa12.15□□□□□ -0.46
SPG11-212ENST00000558790 BICC1Q9H694 974 aaKnown RBP12.15□□□□□ -0.46
SPG11-212ENST00000558790 ZFYVE28Q9HCC9 887 aa12.15□□□□□ -0.46
SPG11-212ENST00000558790 PRDM6Q9NQX0 595 aa12.15□□□□□ -0.46
SPG11-212ENST00000558790 RIPOR2Q9Y4F9 1068 aa12.15□□□□□ -0.46
SPG11-212ENST00000558790 ATAD5Q96QE3 1844 aa12.15□□□□□ -0.46
SPG11-212ENST00000558790 RPAP1Q9BWH6 1393 aaPredicted RBP12.15□□□□□ -0.46
SPG11-212ENST00000558790 LRRC24Q50LG9 513 aa12.14□□□□□ -0.47
SPG11-212ENST00000558790 VPS37DQ86XT2 251 aa12.14□□□□□ -0.47
SPG11-212ENST00000558790 DEFB123Q8N688 67 aa12.14□□□□□ -0.47
SPG11-212ENST00000558790 VGLL2Q8N8G2 317 aa12.14□□□□□ -0.47
SPG11-212ENST00000558790 TEKT1Q969V4 418 aa12.14□□□□□ -0.47
SPG11-212ENST00000558790 WRNIP1Q96S55 665 aa12.14□□□□□ -0.47
SPG11-212ENST00000558790 ARHGAP39Q9C0H5 1083 aa12.14□□□□□ -0.47
SPG11-212ENST00000558790 UTYO14607 1347 aa12.13□□□□□ -0.47
SPG11-212ENST00000558790 ZBTB7BO15156 539 aaPredicted RBP12.13□□□□□ -0.47
SPG11-212ENST00000558790 RABL6Q3YEC7 729 aaPredicted RBP12.13□□□□□ -0.47
SPG11-212ENST00000558790 METTL24Q5JXM2 366 aa12.13□□□□□ -0.47
SPG11-212ENST00000558790 FBXO33Q7Z6M2 555 aa12.13□□□□□ -0.47
SPG11-212ENST00000558790 ANKRD44Q8N8A2 993 aa12.13□□□□□ -0.47
SPG11-212ENST00000558790 TBC1D22AQ8WUA7 517 aa12.13□□□□□ -0.47
SPG11-212ENST00000558790 ZKSCAN4Q969J2 545 aaPredicted RBP12.13□□□□□ -0.47
SPG11-212ENST00000558790 CALR3Q96L12 384 aaKnown RBP12.13□□□□□ -0.47
SPG11-212ENST00000558790 BTBD19C9JJ37 291 aa12.12□□□□□ -0.47
SPG11-212ENST00000558790 TLR2O60603 784 aa12.12□□□□□ -0.47
SPG11-212ENST00000558790 CETPP11597 493 aa12.12□□□□□ -0.47
SPG11-212ENST00000558790 LACTBP83111 547 aaPredicted RBP12.12□□□□□ -0.47
SPG11-212ENST00000558790 HDLBPQ00341 1268 aaKnown RBP12.12□□□□□ -0.47
SPG11-212ENST00000558790 FOXC1Q12948 553 aa12.12□□□□□ -0.47
SPG11-212ENST00000558790 SEMA3FQ13275 785 aa12.12□□□□□ -0.47
SPG11-212ENST00000558790 MTFR1Q15390 333 aa12.12□□□□□ -0.47
SPG11-212ENST00000558790 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.12□□□□□ -0.47
SPG11-212ENST00000558790 KLHDC4Q8TBB5 520 aa12.12□□□□□ -0.47
SPG11-212ENST00000558790 ZDHHC15Q96MV8 337 aa12.12□□□□□ -0.47
SPG11-212ENST00000558790 C1QTNF2Q9BXJ5 285 aa12.12□□□□□ -0.47
SPG11-212ENST00000558790 ALG2Q9H553 416 aa12.12□□□□□ -0.47
SPG11-212ENST00000558790 STAP2Q9UGK3 403 aa12.12□□□□□ -0.47
SPG11-212ENST00000558790 STXBP5LQ9Y2K9 1186 aa12.12□□□□□ -0.47
SPG11-212ENST00000558790 CDH23Q9H251 3354 aa12.12□□□□□ -0.47
SPG11-212ENST00000558790 FRAT2O75474 233 aaPredicted RBP12.11□□□□□ -0.47
SPG11-212ENST00000558790 PPIL2Q13356 520 aa12.11□□□□□ -0.47
SPG11-212ENST00000558790 SNAPC2Q13487 334 aa12.11□□□□□ -0.47
SPG11-212ENST00000558790 ARHGEF6Q15052 776 aa12.11□□□□□ -0.47
SPG11-212ENST00000558790 CAVIN4Q5BKX8 364 aa12.11□□□□□ -0.47
SPG11-212ENST00000558790 APOBEC3HQ6NTF7 200 aaKnown RBP12.11□□□□□ -0.47
SPG11-212ENST00000558790 UBE2Q1Q7Z7E8 422 aa12.11□□□□□ -0.47
SPG11-212ENST00000558790 NBPF11Q86T75 865 aa12.11□□□□□ -0.47
SPG11-212ENST00000558790 ZNF598Q86UK7 904 aaKnown RBP12.11□□□□□ -0.47
SPG11-212ENST00000558790 FAM83AQ86UY5 434 aa12.11□□□□□ -0.47
SPG11-212ENST00000558790 ERO1BQ86YB8 467 aa12.11□□□□□ -0.47
SPG11-212ENST00000558790 ZCCHC17Q9NP64 241 aaKnown RBP12.11□□□□□ -0.47
SPG11-212ENST00000558790 MTMR10Q9NXD2 777 aa12.11□□□□□ -0.47
SPG11-212ENST00000558790 TMOD2Q9NZR1 351 aa12.11□□□□□ -0.47
SPG11-212ENST00000558790 V9GY48 417 aaPredicted RBP12.11□□□□□ -0.47
SPG11-212ENST00000558790 MAST3O60307 1309 aa12.11□□□□□ -0.47
SPG11-212ENST00000558790 PDE8BO95263 885 aa12.1□□□□□ -0.47
SPG11-212ENST00000558790 VARSP26640 1264 aaKnown RBP12.1□□□□□ -0.47
SPG11-212ENST00000558790 FKBP1CQ5VVH2 108 aa12.1□□□□□ -0.47
SPG11-212ENST00000558790 MRGPRX2Q96LB1 330 aa12.1□□□□□ -0.47
SPG11-212ENST00000558790 LOC285556D6RIA3 1793 aa12.1□□□□□ -0.47
SPG11-212ENST00000558790 KIF16BQ96L93 1317 aa12.1□□□□□ -0.47
SPG11-212ENST00000558790 ADGRA2Q96PE1 1338 aa12.1□□□□□ -0.47
SPG11-212ENST00000558790 DNAH12Q6ZR08 3092 aa12.09□□□□□ -0.47
SPG11-212ENST00000558790 CDK5RAP2Q96SN8 1893 aa12.09□□□□□ -0.47
SPG11-212ENST00000558790 WDHD1O75717 1129 aaPredicted RBP12.09□□□□□ -0.47
SPG11-212ENST00000558790 CTGFP29279 349 aa12.09□□□□□ -0.47
SPG11-212ENST00000558790 INPP5BP32019 993 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms