RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 C7orf61Q8IZ16 206 aa13.98□□□□□ -0.17
CASC4-205ENST00000558735 TDHQ8IZJ6 230 aa13.98□□□□□ -0.17
CASC4-205ENST00000558735 DNAJC2Q99543 621 aaKnown RBP13.98□□□□□ -0.17
CASC4-205ENST00000558735 EHD4Q9H223 541 aa13.98□□□□□ -0.17
CASC4-205ENST00000558735 CHMP4BQ9H444 224 aaKnown RBP13.98□□□□□ -0.17
CASC4-205ENST00000558735 HMX1Q9NP08 348 aaPredicted RBP13.98□□□□□ -0.17
CASC4-205ENST00000558735 RBPJLQ9UBG7 517 aa13.98□□□□□ -0.17
CASC4-205ENST00000558735 MORF4L1Q9UBU8 362 aa13.98□□□□□ -0.17
CASC4-205ENST00000558735 SERPINB13Q9UIV8 391 aa13.98□□□□□ -0.17
CASC4-205ENST00000558735 ZNF532Q9HCE3 1301 aa13.97□□□□□ -0.17
CASC4-205ENST00000558735 MAGEA10P43363 369 aaPredicted RBP13.97□□□□□ -0.17
CASC4-205ENST00000558735 IRX3P78415 501 aaPredicted RBP13.97□□□□□ -0.17
CASC4-205ENST00000558735 EVX2Q03828 476 aa13.97□□□□□ -0.17
CASC4-205ENST00000558735 Q3C1V9 767 aa13.97□□□□□ -0.17
CASC4-205ENST00000558735 SLFNL1Q499Z3 407 aa13.97□□□□□ -0.17
CASC4-205ENST00000558735 CERKLQ49MI3 558 aaPredicted RBP13.97□□□□□ -0.17
CASC4-205ENST00000558735 BOLA2Q9H3K6 86 aa13.97□□□□□ -0.17
CASC4-205ENST00000558735 C11orf49Q9H6J7 331 aa13.97□□□□□ -0.17
CASC4-205ENST00000558735 TXNRD2Q9NNW7 524 aa13.97□□□□□ -0.17
CASC4-205ENST00000558735 CDK5RAP2Q96SN8 1893 aa13.97□□□□□ -0.17
CASC4-205ENST00000558735 POLR3DP05423 398 aaPredicted RBP13.96□□□□□ -0.17
CASC4-205ENST00000558735 ATP5JP18859 108 aa13.96□□□□□ -0.17
CASC4-205ENST00000558735 GUCY1A2P33402 732 aa13.96□□□□□ -0.17
CASC4-205ENST00000558735 SHMT1P34896 483 aa13.96□□□□□ -0.17
CASC4-205ENST00000558735 HERVK_113P62684 666 aa13.96□□□□□ -0.17
CASC4-205ENST00000558735 GABPAQ06546 454 aa13.96□□□□□ -0.17
CASC4-205ENST00000558735 USP17L2Q6R6M4 530 aa13.96□□□□□ -0.17
CASC4-205ENST00000558735 TAOK2Q9UL54 1235 aa13.96□□□□□ -0.17
CASC4-205ENST00000558735 ZMYND8Q9ULU4 1186 aaPredicted RBP13.96□□□□□ -0.17
CASC4-205ENST00000558735 ATAD5Q96QE3 1844 aa13.95□□□□□ -0.18
CASC4-205ENST00000558735 COL6A1P12109 1028 aa13.95□□□□□ -0.18
CASC4-205ENST00000558735 XRCC5P13010 732 aaKnown RBP13.95□□□□□ -0.18
CASC4-205ENST00000558735 RAB3GAP1Q15042 981 aa13.95□□□□□ -0.18
CASC4-205ENST00000558735 ABCB5Q2M3G0 1257 aa13.95□□□□□ -0.18
CASC4-205ENST00000558735 FAM109BQ6ICB4 259 aaPredicted RBP13.95□□□□□ -0.18
CASC4-205ENST00000558735 Q7L0L9 218 aa13.95□□□□□ -0.18
CASC4-205ENST00000558735 LCORLQ8N3X6 602 aa13.95□□□□□ -0.18
CASC4-205ENST00000558735 GPRC5AQ8NFJ5 357 aa13.95□□□□□ -0.18
CASC4-205ENST00000558735 ACER1Q8TDN7 264 aa13.95□□□□□ -0.18
CASC4-205ENST00000558735 CRNKL1Q9BZJ0 848 aaKnown RBP13.95□□□□□ -0.18
CASC4-205ENST00000558735 DCP1AQ9NPI6 582 aaPredicted RBP13.95□□□□□ -0.18
CASC4-205ENST00000558735 PAG1Q9NWQ8 432 aa13.95□□□□□ -0.18
CASC4-205ENST00000558735 MCM9Q9NXL9 1143 aa13.95□□□□□ -0.18
CASC4-205ENST00000558735 MAST2Q6P0Q8 1798 aa13.95□□□□□ -0.18
CASC4-205ENST00000558735 FOCADQ5VW36 1801 aa13.94□□□□□ -0.18
CASC4-205ENST00000558735 LOC285556D6RIA3 1793 aa13.94□□□□□ -0.18
CASC4-205ENST00000558735 PRKAB2O43741 272 aa13.94□□□□□ -0.18
CASC4-205ENST00000558735 SMARCA5O60264 1052 aaPredicted RBP13.94□□□□□ -0.18
CASC4-205ENST00000558735 CHGBP05060 677 aa13.94□□□□□ -0.18
CASC4-205ENST00000558735 ADD2P35612 726 aa13.94□□□□□ -0.18
CASC4-205ENST00000558735 TRIM32Q13049 653 aa13.94□□□□□ -0.18
CASC4-205ENST00000558735 SDR42E1Q8WUS8 393 aa13.94□□□□□ -0.18
CASC4-205ENST00000558735 C12orf42Q96LP6 360 aa13.94□□□□□ -0.18
CASC4-205ENST00000558735 HAUS7Q99871 368 aa13.94□□□□□ -0.18
CASC4-205ENST00000558735 KIAA1683Q9H0B3 1180 aa13.94□□□□□ -0.18
CASC4-205ENST00000558735 ARMT1Q9H993 441 aa13.94□□□□□ -0.18
CASC4-205ENST00000558735 CABP5Q9NP86 173 aa13.94□□□□□ -0.18
CASC4-205ENST00000558735 PFASO15067 1338 aa13.93□□□□□ -0.18
CASC4-205ENST00000558735 USP17L15C9J2P7 530 aa13.93□□□□□ -0.18
CASC4-205ENST00000558735 USP17L13C9JLJ4 530 aa13.93□□□□□ -0.18
CASC4-205ENST00000558735 USP17L11C9JVI0 530 aa13.93□□□□□ -0.18
CASC4-205ENST00000558735 USP17L18D6R9N7 530 aa13.93□□□□□ -0.18
CASC4-205ENST00000558735 USP17L22D6RA61 530 aa13.93□□□□□ -0.18
CASC4-205ENST00000558735 USP17L17D6RBQ6 530 aa13.93□□□□□ -0.18
CASC4-205ENST00000558735 USP17L19D6RCP7 530 aa13.93□□□□□ -0.18
CASC4-205ENST00000558735 USP17L20D6RJB6 530 aa13.93□□□□□ -0.18
CASC4-205ENST00000558735 POTEB2H3BUK9 544 aa13.93□□□□□ -0.18
CASC4-205ENST00000558735 CYP2D6P10635 497 aa13.93□□□□□ -0.18
CASC4-205ENST00000558735 ERVK-9P63128 1117 aa13.93□□□□□ -0.18
CASC4-205ENST00000558735 ERVK-24P63145 666 aa13.93□□□□□ -0.18
CASC4-205ENST00000558735 USP17L24Q0WX57 530 aa13.93□□□□□ -0.18
CASC4-205ENST00000558735 ZYXQ15942 572 aaKnown RBP13.93□□□□□ -0.18
CASC4-205ENST00000558735 CATSPERGQ6ZRH7 1159 aa13.93□□□□□ -0.18
CASC4-205ENST00000558735 TRMT44Q8IYL2 757 aaKnown RBP13.93□□□□□ -0.18
CASC4-205ENST00000558735 TRIB2Q92519 343 aa13.93□□□□□ -0.18
CASC4-205ENST00000558735 LRRCC1Q9C099 1032 aa13.93□□□□□ -0.18
CASC4-205ENST00000558735 UBE2OQ9C0C9 1292 aaKnown RBP13.93□□□□□ -0.18
CASC4-205ENST00000558735 PORCNQ9H237 461 aa13.93□□□□□ -0.18
CASC4-205ENST00000558735 MYH1P12882 1939 aa13.93□□□□□ -0.18
CASC4-205ENST00000558735 DDX60LQ5H9U9 1706 aaKnown RBP13.93□□□□□ -0.18
CASC4-205ENST00000558735 VCANP13611 3396 aa13.92□□□□□ -0.18
CASC4-205ENST00000558735 SMIM22K7EJ46 135 aa13.92□□□□□ -0.18
CASC4-205ENST00000558735 SYN1P17600 705 aa13.92□□□□□ -0.18
CASC4-205ENST00000558735 CYP2B6P20813 491 aa13.92□□□□□ -0.18
CASC4-205ENST00000558735 USP14P54578 494 aa13.92□□□□□ -0.18
CASC4-205ENST00000558735 SEPT2Q15019 361 aa13.92□□□□□ -0.18
CASC4-205ENST00000558735 SOCS4Q8WXH5 440 aa13.92□□□□□ -0.18
CASC4-205ENST00000558735 USP6NLQ92738 828 aa13.92□□□□□ -0.18
CASC4-205ENST00000558735 DYNLL2Q96FJ2 89 aa13.92□□□□□ -0.18
CASC4-205ENST00000558735 NUDT12Q9BQG2 462 aa13.92□□□□□ -0.18
CASC4-205ENST00000558735 PAGR1Q9BTK6 254 aa13.92□□□□□ -0.18
CASC4-205ENST00000558735 COL25A1Q9BXS0 654 aaPredicted RBP13.92□□□□□ -0.18
CASC4-205ENST00000558735 EYSQ5T1H1 3165 aa13.92□□□□□ -0.18
CASC4-205ENST00000558735 A0A1W2PRG0 241 aa13.91□□□□□ -0.18
CASC4-205ENST00000558735 CNMDO75829 334 aa13.91□□□□□ -0.18
CASC4-205ENST00000558735 MBD4O95243 580 aa13.91□□□□□ -0.18
CASC4-205ENST00000558735 PRKAR2AP13861 404 aaKnown RBP13.91□□□□□ -0.18
CASC4-205ENST00000558735 MAPK4P31152 587 aa13.91□□□□□ -0.18
CASC4-205ENST00000558735 LHX8Q68G74 356 aa13.91□□□□□ -0.18
CASC4-205ENST00000558735 SIAH1Q8IUQ4 282 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms