RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 MAP2P11137 1827 aaKnown RBP5.83□□□□□ -1.48
SPG11-211ENST00000558561 WASHC2AQ641Q2 1341 aa5.83□□□□□ -1.48
SPG11-211ENST00000558561 MYOM1P52179 1685 aa5.83□□□□□ -1.48
SPG11-211ENST00000558561 RBM47A0AV96 593 aaKnown RBP5.83□□□□□ -1.48
SPG11-211ENST00000558561 SPDYE3A6NKU9 549 aa5.83□□□□□ -1.48
SPG11-211ENST00000558561 TM4SF5O14894 197 aa5.83□□□□□ -1.48
SPG11-211ENST00000558561 KCNQ2O43526 872 aa5.83□□□□□ -1.48
SPG11-211ENST00000558561 ESRRAP11474 423 aaPredicted RBP5.83□□□□□ -1.48
SPG11-211ENST00000558561 EIF4BP23588 611 aaKnown RBP5.83□□□□□ -1.48
SPG11-211ENST00000558561 HOXC9P31274 260 aa5.83□□□□□ -1.48
SPG11-211ENST00000558561 GSK3AP49840 483 aa5.83□□□□□ -1.48
SPG11-211ENST00000558561 PCDH1Q08174 1060 aa5.83□□□□□ -1.48
SPG11-211ENST00000558561 IKBKEQ14164 716 aa5.83□□□□□ -1.48
SPG11-211ENST00000558561 EZH2Q15910 746 aaKnown RBP5.83□□□□□ -1.48
SPG11-211ENST00000558561 GRIK4Q16099 956 aa5.83□□□□□ -1.48
SPG11-211ENST00000558561 DTHD1Q6ZMT9 781 aa5.83□□□□□ -1.48
SPG11-211ENST00000558561 TMC4Q7Z404 712 aa5.83□□□□□ -1.48
SPG11-211ENST00000558561 FBXO11Q86XK2 927 aa5.83□□□□□ -1.48
SPG11-211ENST00000558561 KCNH5Q8NCM2 988 aa5.83□□□□□ -1.48
SPG11-211ENST00000558561 C3orf58Q8NDZ4 430 aa5.83□□□□□ -1.48
SPG11-211ENST00000558561 KLHDC7BQ96G42 594 aa5.83□□□□□ -1.48
SPG11-211ENST00000558561 COG3Q96JB2 828 aa5.83□□□□□ -1.48
SPG11-211ENST00000558561 FRMD6Q96NE9 622 aa5.83□□□□□ -1.48
SPG11-211ENST00000558561 CLEC4MQ9H2X3 399 aaPredicted RBP5.83□□□□□ -1.48
SPG11-211ENST00000558561 ZNF576Q9H609 170 aa5.83□□□□□ -1.48
SPG11-211ENST00000558561 LTN1O94822 1766 aa5.83□□□□□ -1.48
SPG11-211ENST00000558561 OVOS2A0A0J9YW53 1432 aa5.82□□□□□ -1.48
SPG11-211ENST00000558561 OVOS2Q6IE36 1432 aa5.82□□□□□ -1.48
SPG11-211ENST00000558561 EDC4Q6P2E9 1401 aaKnown RBP5.82□□□□□ -1.48
SPG11-211ENST00000558561 NSD3Q9BZ95 1437 aa5.82□□□□□ -1.48
SPG11-211ENST00000558561 ANKRD36BQ8N2N9 1353 aa5.82□□□□□ -1.48
SPG11-211ENST00000558561 WDR17Q8IZU2 1322 aa5.82□□□□□ -1.48
SPG11-211ENST00000558561 PPM1GO15355 546 aaPredicted RBP5.82□□□□□ -1.48
SPG11-211ENST00000558561 DDX3YO15523 660 aaKnown RBP5.82□□□□□ -1.48
SPG11-211ENST00000558561 USP17L7P0C7H9 530 aa5.82□□□□□ -1.48
SPG11-211ENST00000558561 ZNF157P51786 506 aaPredicted RBP5.82□□□□□ -1.48
SPG11-211ENST00000558561 FAAP100Q0VG06 881 aa5.82□□□□□ -1.48
SPG11-211ENST00000558561 PRRT3Q5FWE3 981 aa5.82□□□□□ -1.48
SPG11-211ENST00000558561 FAM117BQ6P1L5 589 aa5.82□□□□□ -1.48
SPG11-211ENST00000558561 DTWD1Q8N5C7 304 aa5.82□□□□□ -1.48
SPG11-211ENST00000558561 ACSBG1Q96GR2 724 aa5.82□□□□□ -1.48
SPG11-211ENST00000558561 KCNK4Q9NYG8 393 aa5.82□□□□□ -1.48
SPG11-211ENST00000558561 POLKQ9UBT6 870 aa5.82□□□□□ -1.48
SPG11-211ENST00000558561 PEAK1Q9H792 1746 aa5.82□□□□□ -1.48
SPG11-211ENST00000558561 BRD4O60885 1362 aaPredicted RBP5.81□□□□□ -1.48
SPG11-211ENST00000558561 DLL1O00548 723 aa5.81□□□□□ -1.48
SPG11-211ENST00000558561 GSTT1P30711 240 aa5.81□□□□□ -1.48
SPG11-211ENST00000558561 AMPHP49418 695 aa5.81□□□□□ -1.48
SPG11-211ENST00000558561 RASSF7Q02833 373 aa5.81□□□□□ -1.48
SPG11-211ENST00000558561 PTPN12Q05209 780 aaKnown RBP5.81□□□□□ -1.48
SPG11-211ENST00000558561 KCNMA1Q12791 1236 aa5.81□□□□□ -1.48
SPG11-211ENST00000558561 SHISA2Q6UWI4 295 aa5.81□□□□□ -1.48
SPG11-211ENST00000558561 ZNF428Q96B54 188 aa5.81□□□□□ -1.48
SPG11-211ENST00000558561 DCAF5Q96JK2 942 aa5.81□□□□□ -1.48
SPG11-211ENST00000558561 SRCIN1Q9C0H9 1055 aa5.81□□□□□ -1.48
SPG11-211ENST00000558561 SEC31BQ9NQW1 1179 aa5.81□□□□□ -1.48
SPG11-211ENST00000558561 FAM8A1Q9UBU6 413 aa5.81□□□□□ -1.48
SPG11-211ENST00000558561 THSD7AQ9UPZ6 1657 aa5.81□□□□□ -1.48
SPG11-211ENST00000558561 EP400Q96L91 3159 aa5.81□□□□□ -1.48
SPG11-211ENST00000558561 KRBA1A5PL33 1030 aa5.8□□□□□ -1.48
SPG11-211ENST00000558561 RNF225M0QZC1 329 aaPredicted RBP5.8□□□□□ -1.48
SPG11-211ENST00000558561 EXOC5O00471 708 aa5.8□□□□□ -1.48
SPG11-211ENST00000558561 SORBS3O60504 671 aa5.8□□□□□ -1.48
SPG11-211ENST00000558561 APBA3O96018 575 aa5.8□□□□□ -1.48
SPG11-211ENST00000558561 CTSHP09668 335 aa5.8□□□□□ -1.48
SPG11-211ENST00000558561 SPATA31C1P0DKV0 1188 aa5.8□□□□□ -1.48
SPG11-211ENST00000558561 XRCC5P13010 732 aaKnown RBP5.8□□□□□ -1.48
SPG11-211ENST00000558561 ELNP15502 786 aa5.8□□□□□ -1.48
SPG11-211ENST00000558561 SELPP16109 830 aa5.8□□□□□ -1.48
SPG11-211ENST00000558561 CD68P34810 354 aaPredicted RBP5.8□□□□□ -1.48
SPG11-211ENST00000558561 GSTM4Q03013 218 aa5.8□□□□□ -1.48
SPG11-211ENST00000558561 C19orf57Q0VDD7 668 aa5.8□□□□□ -1.48
SPG11-211ENST00000558561 DDB1Q16531 1140 aa5.8□□□□□ -1.48
SPG11-211ENST00000558561 FOXD4L6Q3SYB3 417 aaPredicted RBP5.8□□□□□ -1.48
SPG11-211ENST00000558561 RPS26P11Q5JNZ5 115 aaPredicted RBP5.8□□□□□ -1.48
SPG11-211ENST00000558561 CC2D1BQ5T0F9 858 aaKnown RBP5.8□□□□□ -1.48
SPG11-211ENST00000558561 FOXD4L3Q6VB84 417 aaPredicted RBP5.8□□□□□ -1.48
SPG11-211ENST00000558561 MAP4K3Q8IVH8 894 aa5.8□□□□□ -1.48
SPG11-211ENST00000558561 DDX54Q8TDD1 881 aaKnown RBP5.8□□□□□ -1.48
SPG11-211ENST00000558561 WNT8BQ93098 351 aa5.8□□□□□ -1.48
SPG11-211ENST00000558561 CAMKK2Q96RR4 588 aa5.8□□□□□ -1.48
SPG11-211ENST00000558561 PDGFDQ9GZP0 370 aaPredicted RBP5.8□□□□□ -1.48
SPG11-211ENST00000558561 MRS2Q9HD23 443 aa5.8□□□□□ -1.48
SPG11-211ENST00000558561 CRB1P82279 1406 aa5.8□□□□□ -1.48
SPG11-211ENST00000558561 SBF2Q86WG5 1849 aa5.79□□□□□ -1.48
SPG11-211ENST00000558561 UNCXA6NJT0 531 aa5.79□□□□□ -1.48
SPG11-211ENST00000558561 ADAM11O75078 769 aa5.79□□□□□ -1.48
SPG11-211ENST00000558561 FBXO24O75426 580 aa5.79□□□□□ -1.48
SPG11-211ENST00000558561 B3GALT4O96024 378 aa5.79□□□□□ -1.48
SPG11-211ENST00000558561 ARL4DP49703 201 aa5.79□□□□□ -1.48
SPG11-211ENST00000558561 NLRP12P59046 1061 aa5.79□□□□□ -1.48
SPG11-211ENST00000558561 SUZ12Q15022 739 aaKnown RBP5.79□□□□□ -1.48
SPG11-211ENST00000558561 MEI1Q5TIA1 1274 aa5.79□□□□□ -1.48
SPG11-211ENST00000558561 TPTE2Q6XPS3 522 aa5.79□□□□□ -1.48
SPG11-211ENST00000558561 FAM196AQ6ZSG2 479 aa5.79□□□□□ -1.48
SPG11-211ENST00000558561 KLHL23Q8NBE8 558 aa5.79□□□□□ -1.48
SPG11-211ENST00000558561 SRA1Q9HD15 236 aaKnown RBP5.79□□□□□ -1.48
SPG11-211ENST00000558561 OSGEPQ9NPF4 335 aa5.79□□□□□ -1.48
SPG11-211ENST00000558561 VTI1BQ9UEU0 232 aa5.79□□□□□ -1.48
SPG11-211ENST00000558561 THRAP3Q9Y2W1 955 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms