RNA–Protein interactions for RNA: ENST00000558240.1

CDK12-203, Transcript of cyclin dependent kinase 12, humanhuman

TSL 4

Gene CDK12, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-203ENST00000558240 ORC4O43929 436 aa14.28□□□□□ -0.12
CDK12-203ENST00000558240 CTCFP49711 727 aaPredicted RBP14.28□□□□□ -0.12
CDK12-203ENST00000558240 KANSL2Q9H9L4 492 aa14.28□□□□□ -0.12
CDK12-203ENST00000558240 CASP8AP2Q9UKL3 1982 aa14.28□□□□□ -0.12
CDK12-203ENST00000558240 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.28□□□□□ -0.12
CDK12-203ENST00000558240 PRDM1O75626 825 aa14.27□□□□□ -0.13
CDK12-203ENST00000558240 USP14P54578 494 aa14.27□□□□□ -0.13
CDK12-203ENST00000558240 HMGCS2P54868 508 aa14.27□□□□□ -0.13
CDK12-203ENST00000558240 HAND2P61296 217 aa14.27□□□□□ -0.13
CDK12-203ENST00000558240 PTH1RQ03431 593 aa14.27□□□□□ -0.13
CDK12-203ENST00000558240 MTMR2Q13614 643 aa14.27□□□□□ -0.13
CDK12-203ENST00000558240 IMMTQ16891 758 aaKnown RBP14.27□□□□□ -0.13
CDK12-203ENST00000558240 GPAT2Q6NUI2 795 aa14.27□□□□□ -0.13
CDK12-203ENST00000558240 KIAA1211Q6ZU35 1233 aa14.27□□□□□ -0.13
CDK12-203ENST00000558240 FAM43AQ8N2R8 423 aa14.27□□□□□ -0.13
CDK12-203ENST00000558240 MAP4K1Q92918 833 aa14.27□□□□□ -0.13
CDK12-203ENST00000558240 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.27□□□□□ -0.13
CDK12-203ENST00000558240 KIAA1683Q9H0B3 1180 aa14.27□□□□□ -0.13
CDK12-203ENST00000558240 RNF41Q9H4P4 317 aaPredicted RBP14.27□□□□□ -0.13
CDK12-203ENST00000558240 SLC45A1Q9Y2W3 748 aa14.27□□□□□ -0.13
CDK12-203ENST00000558240 U3KPZ7 1027 aaPredicted RBP14.27□□□□□ -0.13
CDK12-203ENST00000558240 PLIN4Q96Q06 1357 aa14.26□□□□□ -0.13
CDK12-203ENST00000558240 HSPA8P11142 646 aaKnown RBP14.26□□□□□ -0.13
CDK12-203ENST00000558240 NT5C2P49902 561 aa14.26□□□□□ -0.13
CDK12-203ENST00000558240 ICA1Q05084 483 aa14.26□□□□□ -0.13
CDK12-203ENST00000558240 NOM1Q5C9Z4 860 aaKnown RBP14.26□□□□□ -0.13
CDK12-203ENST00000558240 AKNAD1Q5T1N1 836 aa14.26□□□□□ -0.13
CDK12-203ENST00000558240 USP17L2Q6R6M4 530 aa14.26□□□□□ -0.13
CDK12-203ENST00000558240 GADL1Q6ZQY3 521 aa14.26□□□□□ -0.13
CDK12-203ENST00000558240 MFSD6Q6ZSS7 791 aa14.26□□□□□ -0.13
CDK12-203ENST00000558240 SIAH1Q8IUQ4 282 aa14.26□□□□□ -0.13
CDK12-203ENST00000558240 NEDD1Q8NHV4 660 aa14.26□□□□□ -0.13
CDK12-203ENST00000558240 ACER1Q8TDN7 264 aa14.26□□□□□ -0.13
CDK12-203ENST00000558240 STAG1Q8WVM7 1258 aa14.26□□□□□ -0.13
CDK12-203ENST00000558240 NBPF3Q9H094 633 aa14.26□□□□□ -0.13
CDK12-203ENST00000558240 ARHGEF10LQ9HCE6 1279 aa14.26□□□□□ -0.13
CDK12-203ENST00000558240 TMOD4Q9NZQ9 345 aa14.26□□□□□ -0.13
CDK12-203ENST00000558240 AGTPBP1Q9UPW5 1226 aa14.26□□□□□ -0.13
CDK12-203ENST00000558240 IGKV6D-41A0A0C4DH26 115 aa14.25□□□□□ -0.13
CDK12-203ENST00000558240 PDHXO00330 501 aa14.25□□□□□ -0.13
CDK12-203ENST00000558240 TSPY3P0CV98 308 aa14.25□□□□□ -0.13
CDK12-203ENST00000558240 TSPY8P0CW00 308 aa14.25□□□□□ -0.13
CDK12-203ENST00000558240 TFAP4Q01664 338 aa14.25□□□□□ -0.13
CDK12-203ENST00000558240 TAF1CQ15572 869 aaPredicted RBP14.25□□□□□ -0.13
CDK12-203ENST00000558240 C12orf42Q96LP6 360 aa14.25□□□□□ -0.13
CDK12-203ENST00000558240 FEZ1Q99689 392 aa14.25□□□□□ -0.13
CDK12-203ENST00000558240 LSG1Q9H089 658 aaKnown RBP14.25□□□□□ -0.13
CDK12-203ENST00000558240 SH2D4AQ9H788 454 aa14.25□□□□□ -0.13
CDK12-203ENST00000558240 ZFYVE28Q9HCC9 887 aa14.25□□□□□ -0.13
CDK12-203ENST00000558240 INCENPQ9NQS7 918 aa14.25□□□□□ -0.13
CDK12-203ENST00000558240 EMILIN3Q9NT22 766 aa14.25□□□□□ -0.13
CDK12-203ENST00000558240 TACC3Q9Y6A5 838 aa14.25□□□□□ -0.13
CDK12-203ENST00000558240 A0A1W2PRG0 241 aa14.24□□□□□ -0.13
CDK12-203ENST00000558240 TSPY2A6NKD2 308 aa14.24□□□□□ -0.13
CDK12-203ENST00000558240 RANBP6O60518 1105 aaKnown RBP14.24□□□□□ -0.13
CDK12-203ENST00000558240 TBC1D8O95759 1140 aa14.24□□□□□ -0.13
CDK12-203ENST00000558240 EEF2P13639 858 aaKnown RBP14.24□□□□□ -0.13
CDK12-203ENST00000558240 HOXA7P31268 230 aaPredicted RBP14.24□□□□□ -0.13
CDK12-203ENST00000558240 PABPC4Q13310 644 aaKnown RBP eCLIP14.24□□□□□ -0.13
CDK12-203ENST00000558240 CRHR2Q13324 411 aa14.24□□□□□ -0.13
CDK12-203ENST00000558240 FAM47AQ5JRC9 791 aa14.24□□□□□ -0.13
CDK12-203ENST00000558240 PPP4R3BQ5MIZ7 849 aa14.24□□□□□ -0.13
CDK12-203ENST00000558240 TBC1D10CQ8IV04 446 aa14.24□□□□□ -0.13
CDK12-203ENST00000558240 NYAP2Q9P242 653 aa14.24□□□□□ -0.13
CDK12-203ENST00000558240 TSKSQ9UJT2 592 aa14.24□□□□□ -0.13
CDK12-203ENST00000558240 TMX2Q9Y320 296 aa14.24□□□□□ -0.13
CDK12-203ENST00000558240 LBX1P52954 281 aa14.23□□□□□ -0.13
CDK12-203ENST00000558240 RRP12Q5JTH9 1297 aaKnown RBP14.23□□□□□ -0.13
CDK12-203ENST00000558240 TREML2Q5T2D2 321 aa14.23□□□□□ -0.13
CDK12-203ENST00000558240 MKL1Q969V6 931 aa14.23□□□□□ -0.13
CDK12-203ENST00000558240 CEP95Q96GE4 821 aa14.23□□□□□ -0.13
CDK12-203ENST00000558240 PARK7Q99497 189 aaKnown RBP14.23□□□□□ -0.13
CDK12-203ENST00000558240 R3HDMLQ9H3Y0 253 aa14.23□□□□□ -0.13
CDK12-203ENST00000558240 ANO2Q9NQ90 1003 aa14.23□□□□□ -0.13
CDK12-203ENST00000558240 PRDM10Q9NQV6 1147 aa14.23□□□□□ -0.13
CDK12-203ENST00000558240 TOMM22Q9NS69 142 aa14.23□□□□□ -0.13
CDK12-203ENST00000558240 MTMR4Q9NYA4 1195 aa14.23□□□□□ -0.13
CDK12-203ENST00000558240 PNMA3Q9UL41 463 aa14.23□□□□□ -0.13
CDK12-203ENST00000558240 SYNPO2Q9UMS6 1093 aa14.23□□□□□ -0.13
CDK12-203ENST00000558240 RBM8AQ9Y5S9 174 aaKnown RBP14.23□□□□□ -0.13
CDK12-203ENST00000558240 TLR2O60603 784 aa14.22□□□□□ -0.13
CDK12-203ENST00000558240 TTLL1O95922 423 aa14.22□□□□□ -0.13
CDK12-203ENST00000558240 CYP21A2P08686 494 aa14.22□□□□□ -0.13
CDK12-203ENST00000558240 OSBPP22059 807 aa14.22□□□□□ -0.13
CDK12-203ENST00000558240 DGKZQ13574 1117 aa14.22□□□□□ -0.13
CDK12-203ENST00000558240 CLEC10AQ8IUN9 316 aa14.22□□□□□ -0.13
CDK12-203ENST00000558240 LPAR1Q92633 364 aa14.22□□□□□ -0.13
CDK12-203ENST00000558240 ESR2Q92731 530 aa14.22□□□□□ -0.13
CDK12-203ENST00000558240 KRT23Q9C075 422 aa14.22□□□□□ -0.13
CDK12-203ENST00000558240 VCPKMTQ9H867 229 aa14.22□□□□□ -0.13
CDK12-203ENST00000558240 CNNM2Q9H8M5 875 aa14.22□□□□□ -0.13
CDK12-203ENST00000558240 TCP11L1Q9NUJ3 509 aa14.22□□□□□ -0.13
CDK12-203ENST00000558240 NEDD4P46934 1319 aa14.21□□□□□ -0.13
CDK12-203ENST00000558240 PARP14Q460N5 1801 aa14.21□□□□□ -0.13
CDK12-203ENST00000558240 USP17L15C9J2P7 530 aa14.21□□□□□ -0.13
CDK12-203ENST00000558240 USP17L13C9JLJ4 530 aa14.21□□□□□ -0.13
CDK12-203ENST00000558240 USP17L11C9JVI0 530 aa14.21□□□□□ -0.13
CDK12-203ENST00000558240 USP17L18D6R9N7 530 aa14.21□□□□□ -0.13
CDK12-203ENST00000558240 USP17L22D6RA61 530 aa14.21□□□□□ -0.13
CDK12-203ENST00000558240 USP17L17D6RBQ6 530 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms