RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 CASZ1Q86V15 1759 aa8.69□□□□□ -1.02
CLPX-202ENST00000558103 ADAM11O75078 769 aa8.69□□□□□ -1.02
CLPX-202ENST00000558103 ITPKAP23677 461 aa8.69□□□□□ -1.02
CLPX-202ENST00000558103 MAPK8P45983 427 aa8.69□□□□□ -1.02
CLPX-202ENST00000558103 ZC3H6P61129 1189 aaKnown RBP8.69□□□□□ -1.02
CLPX-202ENST00000558103 GRM2Q14416 872 aa8.69□□□□□ -1.02
CLPX-202ENST00000558103 EZH2Q15910 746 aaKnown RBP8.69□□□□□ -1.02
CLPX-202ENST00000558103 ZNF423Q2M1K9 1284 aa8.69□□□□□ -1.02
CLPX-202ENST00000558103 NBPF8Q3BBV2 869 aa8.69□□□□□ -1.02
CLPX-202ENST00000558103 CAMKK2Q96RR4 588 aa8.69□□□□□ -1.02
CLPX-202ENST00000558103 SSBP4Q9BWG4 385 aaPredicted RBP8.69□□□□□ -1.02
CLPX-202ENST00000558103 GZF1Q9H116 711 aaPredicted RBP8.69□□□□□ -1.02
CLPX-202ENST00000558103 CLEC4MQ9H2X3 399 aaPredicted RBP8.69□□□□□ -1.02
CLPX-202ENST00000558103 TPSG1Q9NRR2 321 aa8.69□□□□□ -1.02
CLPX-202ENST00000558103 PPP4R2Q9NY27 417 aa8.69□□□□□ -1.02
CLPX-202ENST00000558103 TMEM238LA0A1B0GVL6 79 aa8.68□□□□□ -1.02
CLPX-202ENST00000558103 PTPN12Q05209 780 aaKnown RBP8.68□□□□□ -1.02
CLPX-202ENST00000558103 PCDH1Q08174 1060 aa8.68□□□□□ -1.02
CLPX-202ENST00000558103 DUOXA2Q1HG44 320 aa8.68□□□□□ -1.02
CLPX-202ENST00000558103 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.68□□□□□ -1.02
CLPX-202ENST00000558103 NUTM2GQ5VZR2 741 aa8.68□□□□□ -1.02
CLPX-202ENST00000558103 PRPF40BQ6NWY9 871 aaKnown RBP8.68□□□□□ -1.02
CLPX-202ENST00000558103 PI16Q6UXB8 463 aa8.68□□□□□ -1.02
CLPX-202ENST00000558103 FAM196AQ6ZSG2 479 aa8.68□□□□□ -1.02
CLPX-202ENST00000558103 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.68□□□□□ -1.02
CLPX-202ENST00000558103 GLIS3Q8NEA6 775 aa8.68□□□□□ -1.02
CLPX-202ENST00000558103 FOXD4L4Q8WXT5 416 aaPredicted RBP8.68□□□□□ -1.02
CLPX-202ENST00000558103 BRD4O60885 1362 aaPredicted RBP8.68□□□□□ -1.02
CLPX-202ENST00000558103 USP6P35125 1406 aa8.68□□□□□ -1.02
CLPX-202ENST00000558103 ZBTB7CA1YPR0 619 aa8.67□□□□□ -1.02
CLPX-202ENST00000558103 EIF4EBP3O60516 100 aaPredicted RBP8.67□□□□□ -1.02
CLPX-202ENST00000558103 LTN1O94822 1766 aa8.67□□□□□ -1.02
CLPX-202ENST00000558103 TRIM37O94972 964 aa8.67□□□□□ -1.02
CLPX-202ENST00000558103 WISP1O95388 367 aa8.67□□□□□ -1.02
CLPX-202ENST00000558103 UTRNP46939 3433 aa8.67□□□□□ -1.02
CLPX-202ENST00000558103 CRB1P82279 1406 aa8.67□□□□□ -1.02
CLPX-202ENST00000558103 R3HDM1Q15032 1099 aaKnown RBP8.67□□□□□ -1.02
CLPX-202ENST00000558103 KIAA1211Q6ZU35 1233 aa8.67□□□□□ -1.02
CLPX-202ENST00000558103 ABCB6Q9NP58 842 aa8.67□□□□□ -1.02
CLPX-202ENST00000558103 PODXL2Q9NZ53 605 aa8.67□□□□□ -1.02
CLPX-202ENST00000558103 WWC3Q9ULE0 1092 aa8.67□□□□□ -1.02
CLPX-202ENST00000558103 CENPJQ9HC77 1338 aaPredicted RBP8.66□□□□□ -1.02
CLPX-202ENST00000558103 NLRP12P59046 1061 aa8.66□□□□□ -1.02
CLPX-202ENST00000558103 ALG1LQ6GMV1 187 aa8.66□□□□□ -1.02
CLPX-202ENST00000558103 ACAD11Q709F0 780 aa8.66□□□□□ -1.02
CLPX-202ENST00000558103 DZIP1LQ8IYY4 767 aaKnown RBP8.66□□□□□ -1.02
CLPX-202ENST00000558103 AGGF1Q8N302 714 aaeCLIP8.66□□□□□ -1.02
CLPX-202ENST00000558103 FBF1Q8TES7 1133 aa8.66□□□□□ -1.02
CLPX-202ENST00000558103 BCO2Q9BYV7 579 aa8.66□□□□□ -1.02
CLPX-202ENST00000558103 USP35Q9P2H5 1018 aa8.66□□□□□ -1.02
CLPX-202ENST00000558103 THRAP3Q9Y2W1 955 aaKnown RBP8.66□□□□□ -1.02
CLPX-202ENST00000558103 ABCC6O95255 1503 aa8.65□□□□□ -1.02
CLPX-202ENST00000558103 OVOS2A0A0G2JMS6 1433 aa8.65□□□□□ -1.02
CLPX-202ENST00000558103 OVOS2A0A0J9YW53 1432 aa8.65□□□□□ -1.02
CLPX-202ENST00000558103 OVOS2Q6IE36 1432 aa8.65□□□□□ -1.02
CLPX-202ENST00000558103 ANKRD33BA6NCL7 494 aa8.65□□□□□ -1.02
CLPX-202ENST00000558103 GCP02774 474 aa8.65□□□□□ -1.02
CLPX-202ENST00000558103 P4HBP07237 508 aaKnown RBP8.65□□□□□ -1.02
CLPX-202ENST00000558103 GSTM4Q03013 218 aa8.65□□□□□ -1.02
CLPX-202ENST00000558103 RSPO4Q2I0M5 234 aaPredicted RBP8.65□□□□□ -1.02
CLPX-202ENST00000558103 NKAPLQ5M9Q1 402 aa8.65□□□□□ -1.02
CLPX-202ENST00000558103 LCE1DQ5T752 114 aa8.65□□□□□ -1.02
CLPX-202ENST00000558103 Q6ZS46 218 aa8.65□□□□□ -1.02
CLPX-202ENST00000558103 TCP11L2Q8N4U5 519 aa8.65□□□□□ -1.02
CLPX-202ENST00000558103 UBASH3BQ8TF42 649 aa8.65□□□□□ -1.02
CLPX-202ENST00000558103 MEGF10Q96KG7 1140 aa8.65□□□□□ -1.02
CLPX-202ENST00000558103 SETDB2Q96T68 719 aa8.65□□□□□ -1.02
CLPX-202ENST00000558103 ZNF576Q9H609 170 aa8.65□□□□□ -1.02
CLPX-202ENST00000558103 ZFYVE1Q9HBF4 777 aa8.65□□□□□ -1.02
CLPX-202ENST00000558103 NFAT5O94916 1531 aa8.64□□□□□ -1.03
CLPX-202ENST00000558103 CPSF1Q10570 1443 aaKnown RBP8.64□□□□□ -1.03
CLPX-202ENST00000558103 AATKQ6ZMQ8 1374 aa8.64□□□□□ -1.03
CLPX-202ENST00000558103 EVA1CP58658 441 aa8.64□□□□□ -1.03
CLPX-202ENST00000558103 ATP2B2Q01814 1243 aa8.64□□□□□ -1.03
CLPX-202ENST00000558103 COL19A1Q14993 1142 aa8.64□□□□□ -1.03
CLPX-202ENST00000558103 RPS26P11Q5JNZ5 115 aaPredicted RBP8.64□□□□□ -1.03
CLPX-202ENST00000558103 NXPE4Q6UWF7 544 aa8.64□□□□□ -1.03
CLPX-202ENST00000558103 TP53INP1Q96A56 240 aa8.64□□□□□ -1.03
CLPX-202ENST00000558103 NHSQ6T4R5 1651 aa8.64□□□□□ -1.03
CLPX-202ENST00000558103 B3GALT4O96024 378 aa8.63□□□□□ -1.03
CLPX-202ENST00000558103 LDHBP07195 334 aaKnown RBP8.63□□□□□ -1.03
CLPX-202ENST00000558103 DNAJC14Q6Y2X3 702 aaPredicted RBP8.63□□□□□ -1.03
CLPX-202ENST00000558103 BCL9O00512 1426 aa8.63□□□□□ -1.03
CLPX-202ENST00000558103 MYOM1P52179 1685 aa8.62□□□□□ -1.03
CLPX-202ENST00000558103 MEGF11A6BM72 1044 aa8.62□□□□□ -1.03
CLPX-202ENST00000558103 GIPC1O14908 333 aa8.62□□□□□ -1.03
CLPX-202ENST00000558103 H2AFB1P0C5Y9 115 aa8.62□□□□□ -1.03
CLPX-202ENST00000558103 H2AFB2P0C5Z0 115 aa8.62□□□□□ -1.03
CLPX-202ENST00000558103 XRCC5P13010 732 aaKnown RBP8.62□□□□□ -1.03
CLPX-202ENST00000558103 GLB1P16278 677 aa8.62□□□□□ -1.03
CLPX-202ENST00000558103 FCGRTP55899 365 aa8.62□□□□□ -1.03
CLPX-202ENST00000558103 DTHD1Q6ZMT9 781 aa8.62□□□□□ -1.03
CLPX-202ENST00000558103 DDX54Q8TDD1 881 aaKnown RBP8.62□□□□□ -1.03
CLPX-202ENST00000558103 UBL7Q96S82 380 aaPredicted RBP8.62□□□□□ -1.03
CLPX-202ENST00000558103 PAPPAQ13219 1627 aa8.62□□□□□ -1.03
CLPX-202ENST00000558103 LOC100289279A0A1B0GTE1 492 aa8.61□□□□□ -1.03
CLPX-202ENST00000558103 TRIM26Q12899 539 aaPredicted RBP8.61□□□□□ -1.03
CLPX-202ENST00000558103 RUSC1Q9BVN2 902 aa8.61□□□□□ -1.03
CLPX-202ENST00000558103 CEP41Q9BYV8 373 aa8.61□□□□□ -1.03
CLPX-202ENST00000558103 RNF208Q9H0X6 261 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms