RNA–Protein interactions for RNA: ENST00000557690.5

CNIH1-207, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 3 BASIC

Gene CNIH1, Length 838 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-207ENST00000557690 HSP90AB4PQ58FF6 505 aa13.43□□□□□ -0.26
CNIH1-207ENST00000557690 U2AF1L4Q8WU68 220 aaKnown RBP13.43□□□□□ -0.26
CNIH1-207ENST00000557690 DPF3Q92784 378 aa13.43□□□□□ -0.26
CNIH1-207ENST00000557690 ANTXR1Q9H6X2 564 aa13.43□□□□□ -0.26
CNIH1-207ENST00000557690 IL1RAPL2Q9NP60 686 aa13.43□□□□□ -0.26
CNIH1-207ENST00000557690 C19orf81C9J6K1 198 aa13.42□□□□□ -0.26
CNIH1-207ENST00000557690 APBB1O00213 710 aa13.42□□□□□ -0.26
CNIH1-207ENST00000557690 FARP2O94887 1054 aaPredicted RBP13.42□□□□□ -0.26
CNIH1-207ENST00000557690 SGPL1O95470 568 aa13.42□□□□□ -0.26
CNIH1-207ENST00000557690 RHPN1Q8TCX5 695 aa13.42□□□□□ -0.26
CNIH1-207ENST00000557690 HTATIP2Q9BUP3 242 aa13.42□□□□□ -0.26
CNIH1-207ENST00000557690 A0A0G2JMZ2 1700 aa13.42□□□□□ -0.26
CNIH1-207ENST00000557690 GH2P01242 217 aa13.41□□□□□ -0.26
CNIH1-207ENST00000557690 TFRCP02786 760 aaKnown RBP13.41□□□□□ -0.26
CNIH1-207ENST00000557690 HOXA7P31268 230 aaPredicted RBP13.41□□□□□ -0.26
CNIH1-207ENST00000557690 HERVK_113P62684 666 aa13.41□□□□□ -0.26
CNIH1-207ENST00000557690 TMED8Q6PL24 325 aaPredicted RBP13.41□□□□□ -0.26
CNIH1-207ENST00000557690 UBE2Q1Q7Z7E8 422 aa13.41□□□□□ -0.26
CNIH1-207ENST00000557690 RASEFQ8IZ41 740 aa13.41□□□□□ -0.26
CNIH1-207ENST00000557690 DEFB118Q96PH6 123 aa13.41□□□□□ -0.26
CNIH1-207ENST00000557690 BCL11AQ9H165 835 aa13.41□□□□□ -0.26
CNIH1-207ENST00000557690 MORF4L1Q9UBU8 362 aa13.41□□□□□ -0.26
CNIH1-207ENST00000557690 SERPINB13Q9UIV8 391 aa13.41□□□□□ -0.26
CNIH1-207ENST00000557690 MAGEB6P1A0A0J9YX57 407 aa13.4□□□□□ -0.26
CNIH1-207ENST00000557690 HMMRO75330 724 aa13.4□□□□□ -0.26
CNIH1-207ENST00000557690 HMGCRP04035 888 aa13.4□□□□□ -0.26
CNIH1-207ENST00000557690 TTF1Q15361 905 aaPredicted RBP13.4□□□□□ -0.26
CNIH1-207ENST00000557690 USP17L2Q6R6M4 530 aa13.4□□□□□ -0.26
CNIH1-207ENST00000557690 CLASRPQ8N2M8 674 aaKnown RBP13.4□□□□□ -0.26
CNIH1-207ENST00000557690 P2RX7Q99572 595 aaKnown RBP13.4□□□□□ -0.26
CNIH1-207ENST00000557690 FEZ1Q99689 392 aa13.4□□□□□ -0.26
CNIH1-207ENST00000557690 EHD4Q9H223 541 aa13.4□□□□□ -0.26
CNIH1-207ENST00000557690 PAK6Q9NQU5 681 aaPredicted RBP13.4□□□□□ -0.26
CNIH1-207ENST00000557690 DDX19BQ9UMR2 479 aa13.4□□□□□ -0.26
CNIH1-207ENST00000557690 COG6Q9Y2V7 657 aa13.4□□□□□ -0.26
CNIH1-207ENST00000557690 PEX10O60683 326 aa13.39□□□□□ -0.27
CNIH1-207ENST00000557690 IFIT2P09913 472 aaKnown RBP13.39□□□□□ -0.27
CNIH1-207ENST00000557690 RAB3GAP1Q15042 981 aa13.39□□□□□ -0.27
CNIH1-207ENST00000557690 ZYXQ15942 572 aaKnown RBP13.39□□□□□ -0.27
CNIH1-207ENST00000557690 CERKLQ49MI3 558 aaPredicted RBP13.39□□□□□ -0.27
CNIH1-207ENST00000557690 TATDN1Q6P1N9 297 aa13.39□□□□□ -0.27
CNIH1-207ENST00000557690 TTC6Q86TZ1 520 aa13.39□□□□□ -0.27
CNIH1-207ENST00000557690 RPAP2Q8IXW5 612 aaPredicted RBP13.39□□□□□ -0.27
CNIH1-207ENST00000557690 GPRC5AQ8NFJ5 357 aa13.39□□□□□ -0.27
CNIH1-207ENST00000557690 KIF1BPQ96EK5 621 aa13.39□□□□□ -0.27
CNIH1-207ENST00000557690 DNAJC2Q99543 621 aaKnown RBP13.39□□□□□ -0.27
CNIH1-207ENST00000557690 PAGR1Q9BTK6 254 aa13.39□□□□□ -0.27
CNIH1-207ENST00000557690 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.39□□□□□ -0.277e-7■■■□□ 15.6
CNIH1-207ENST00000557690 GJD2Q9UKL4 321 aa13.39□□□□□ -0.27
CNIH1-207ENST00000557690 ZNF236Q9UL36 1845 aa13.39□□□□□ -0.27
CNIH1-207ENST00000557690 GOLIM4O00461 696 aa13.38□□□□□ -0.27
CNIH1-207ENST00000557690 PDE6AP16499 860 aa13.38□□□□□ -0.27
CNIH1-207ENST00000557690 CAPN2P17655 700 aa13.38□□□□□ -0.27
CNIH1-207ENST00000557690 FXR1P51114 621 aaKnown RBP eCLIP13.38□□□□□ -0.27
CNIH1-207ENST00000557690 ERVK-9P63128 1117 aa13.38□□□□□ -0.27
CNIH1-207ENST00000557690 ERVK-24P63145 666 aa13.38□□□□□ -0.27
CNIH1-207ENST00000557690 ABCB5Q2M3G0 1257 aa13.38□□□□□ -0.27
CNIH1-207ENST00000557690 SLC9C2Q5TAH2 1124 aa13.38□□□□□ -0.27
CNIH1-207ENST00000557690 CCAR1Q8IX12 1150 aaKnown RBP13.38□□□□□ -0.27
CNIH1-207ENST00000557690 GTF3C2Q8WUA4 911 aaPredicted RBP13.38□□□□□ -0.27
CNIH1-207ENST00000557690 RIOK1Q9BRS2 568 aaKnown RBP13.38□□□□□ -0.27
CNIH1-207ENST00000557690 CRNKL1Q9BZJ0 848 aaKnown RBP13.38□□□□□ -0.27
CNIH1-207ENST00000557690 TXNRD2Q9NNW7 524 aa13.38□□□□□ -0.27
CNIH1-207ENST00000557690 EMILIN3Q9NT22 766 aa13.38□□□□□ -0.27
CNIH1-207ENST00000557690 POLR3DP05423 398 aaPredicted RBP13.37□□□□□ -0.27
CNIH1-207ENST00000557690 CYP2B6P20813 491 aa13.37□□□□□ -0.27
CNIH1-207ENST00000557690 MAPK4P31152 587 aa13.37□□□□□ -0.27
CNIH1-207ENST00000557690 SHMT1P34896 483 aa13.37□□□□□ -0.27
CNIH1-207ENST00000557690 PLCD1P51178 756 aa13.37□□□□□ -0.27
CNIH1-207ENST00000557690 PDE3AQ14432 1141 aa13.37□□□□□ -0.27
CNIH1-207ENST00000557690 SIRT2Q8IXJ6 389 aa13.37□□□□□ -0.27
CNIH1-207ENST00000557690 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.37□□□□□ -0.27
CNIH1-207ENST00000557690 SOCS4Q8WXH5 440 aa13.37□□□□□ -0.27
CNIH1-207ENST00000557690 NUDT12Q9BQG2 462 aa13.37□□□□□ -0.27
CNIH1-207ENST00000557690 CRISPLD2Q9H0B8 497 aa13.37□□□□□ -0.27
CNIH1-207ENST00000557690 CABP5Q9NP86 173 aa13.37□□□□□ -0.27
CNIH1-207ENST00000557690 ZBTB40Q9NUA8 1239 aa13.37□□□□□ -0.27
CNIH1-207ENST00000557690 RBPJLQ9UBG7 517 aa13.37□□□□□ -0.27
CNIH1-207ENST00000557690 NR2E3Q9Y5X4 410 aa13.37□□□□□ -0.27
CNIH1-207ENST00000557690 SMCHD1A6NHR9 2005 aa13.37□□□□□ -0.27
CNIH1-207ENST00000557690 GREB1LQ9C091 1923 aaPredicted RBP13.37□□□□□ -0.27
CNIH1-207ENST00000557690 RPTORQ8N122 1335 aa13.37□□□□□ -0.27
CNIH1-207ENST00000557690 ZNF532Q9HCE3 1301 aa13.37□□□□□ -0.27
CNIH1-207ENST00000557690 RAB11FIP3O75154 756 aa13.36□□□□□ -0.27
CNIH1-207ENST00000557690 USP14P54578 494 aa13.36□□□□□ -0.27
CNIH1-207ENST00000557690 TRIM32Q13049 653 aa13.36□□□□□ -0.27
CNIH1-207ENST00000557690 TRIB2Q92519 343 aa13.36□□□□□ -0.27
CNIH1-207ENST00000557690 C12orf42Q96LP6 360 aa13.36□□□□□ -0.27
CNIH1-207ENST00000557690 CHMP4BQ9H444 224 aaKnown RBP13.36□□□□□ -0.27
CNIH1-207ENST00000557690 CWC22Q9HCG8 908 aaKnown RBP13.36□□□□□ -0.27
CNIH1-207ENST00000557690 HMX1Q9NP08 348 aaPredicted RBP13.36□□□□□ -0.27
CNIH1-207ENST00000557690 MCM9Q9NXL9 1143 aa13.36□□□□□ -0.27
CNIH1-207ENST00000557690 LAMA2P24043 3122 aaKnown RBP13.36□□□□□ -0.27
CNIH1-207ENST00000557690 TCRBV5S4A2TA0A5A2 114 aa13.35□□□□□ -0.27
CNIH1-207ENST00000557690 USP17L15C9J2P7 530 aa13.35□□□□□ -0.27
CNIH1-207ENST00000557690 USP17L13C9JLJ4 530 aa13.35□□□□□ -0.27
CNIH1-207ENST00000557690 USP17L11C9JVI0 530 aa13.35□□□□□ -0.27
CNIH1-207ENST00000557690 USP17L18D6R9N7 530 aa13.35□□□□□ -0.27
CNIH1-207ENST00000557690 USP17L22D6RA61 530 aa13.35□□□□□ -0.27
CNIH1-207ENST00000557690 USP17L17D6RBQ6 530 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms