RNA–Protein interactions for RNA: ENST00000557685.5

EFCAB11-213, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-213ENST00000557685 SEMA6CQ9H3T2 930 aa6.58□□□□□ -1.36
EFCAB11-213ENST00000557685 CDK11AQ9UQ88 783 aaPredicted RBP6.58□□□□□ -1.36
EFCAB11-213ENST00000557685 LRIG2O94898 1065 aa6.57□□□□□ -1.36
EFCAB11-213ENST00000557685 NFICP08651 508 aa6.57□□□□□ -1.36
EFCAB11-213ENST00000557685 BMP3P12645 472 aa6.57□□□□□ -1.36
EFCAB11-213ENST00000557685 RAB6AP20340 208 aa6.57□□□□□ -1.36
EFCAB11-213ENST00000557685 DDR2Q16832 855 aa6.57□□□□□ -1.36
EFCAB11-213ENST00000557685 PRAMEF13Q5VWM6 474 aa6.57□□□□□ -1.36
EFCAB11-213ENST00000557685 LARP1BQ659C4 914 aaKnown RBP6.57□□□□□ -1.36
EFCAB11-213ENST00000557685 KRTAP1-3Q8IUG1 177 aa6.57□□□□□ -1.36
EFCAB11-213ENST00000557685 CELF2-AS1Q8N7Q2 184 aa6.57□□□□□ -1.36
EFCAB11-213ENST00000557685 CYB5D2Q8WUJ1 264 aa6.57□□□□□ -1.36
EFCAB11-213ENST00000557685 UTP4Q969X6 686 aaKnown RBP6.57□□□□□ -1.36
EFCAB11-213ENST00000557685 MEGF10Q96KG7 1140 aa6.57□□□□□ -1.36
EFCAB11-213ENST00000557685 KIF2CQ99661 725 aa6.57□□□□□ -1.36
EFCAB11-213ENST00000557685 PIF1Q9H611 641 aa6.57□□□□□ -1.36
EFCAB11-213ENST00000557685 PHAXQ9H814 394 aaKnown RBP6.57□□□□□ -1.36
EFCAB11-213ENST00000557685 ST7Q9NRC1 585 aa6.57□□□□□ -1.36
EFCAB11-213ENST00000557685 MSRB2Q9Y3D2 182 aa6.57□□□□□ -1.36
EFCAB11-213ENST00000557685 LTBP3Q9NS15 1303 aa6.56□□□□□ -1.36
EFCAB11-213ENST00000557685 GBP1P32455 592 aa6.56□□□□□ -1.36
EFCAB11-213ENST00000557685 BMS1Q14692 1282 aaKnown RBP6.56□□□□□ -1.36
EFCAB11-213ENST00000557685 ZYXQ15942 572 aaKnown RBP6.56□□□□□ -1.36
EFCAB11-213ENST00000557685 SGO2Q562F6 1265 aa6.56□□□□□ -1.36
EFCAB11-213ENST00000557685 GIMAP6Q6P9H5 292 aa6.56□□□□□ -1.36
EFCAB11-213ENST00000557685 ARMCX6Q7L4S7 300 aa6.56□□□□□ -1.36
EFCAB11-213ENST00000557685 FAM20CQ8IXL6 584 aa6.56□□□□□ -1.36
EFCAB11-213ENST00000557685 ARMC10Q8N2F6 343 aa6.56□□□□□ -1.36
EFCAB11-213ENST00000557685 MRFAP1L1Q96HT8 127 aa6.56□□□□□ -1.36
EFCAB11-213ENST00000557685 DPH2Q9BQC3 489 aaPredicted RBP6.56□□□□□ -1.36
EFCAB11-213ENST00000557685 DAGLAQ9Y4D2 1042 aa6.56□□□□□ -1.36
EFCAB11-213ENST00000557685 FAM95CA0A1B0GW59 222 aa6.55□□□□□ -1.36
EFCAB11-213ENST00000557685 DHX15O43143 795 aaKnown RBP6.55□□□□□ -1.36
EFCAB11-213ENST00000557685 DDAH1O94760 285 aa6.55□□□□□ -1.36
EFCAB11-213ENST00000557685 H2AFB1P0C5Y9 115 aa6.55□□□□□ -1.36
EFCAB11-213ENST00000557685 H2AFB2P0C5Z0 115 aa6.55□□□□□ -1.36
EFCAB11-213ENST00000557685 MAP4P27816 1152 aaKnown RBP6.55□□□□□ -1.36
EFCAB11-213ENST00000557685 RXRBP28702 533 aa6.55□□□□□ -1.36
EFCAB11-213ENST00000557685 SEZ6L2Q6UXD5 910 aa6.55□□□□□ -1.36
EFCAB11-213ENST00000557685 MICAL1Q8TDZ2 1067 aa6.55□□□□□ -1.36
EFCAB11-213ENST00000557685 SRPK1Q96SB4 655 aaKnown RBP6.55□□□□□ -1.36
EFCAB11-213ENST00000557685 SSBP4Q9BWG4 385 aaPredicted RBP6.55□□□□□ -1.36
EFCAB11-213ENST00000557685 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.55□□□□□ -1.36
EFCAB11-213ENST00000557685 ZNF214Q9UL59 606 aaPredicted RBP6.55□□□□□ -1.36
EFCAB11-213ENST00000557685 CEP131Q9UPN4 1083 aa6.55□□□□□ -1.36
EFCAB11-213ENST00000557685 TLDC2A0PJX2 215 aa6.54□□□□□ -1.36
EFCAB11-213ENST00000557685 UBOX5O94941 541 aa6.54□□□□□ -1.36
EFCAB11-213ENST00000557685 GJB6O95452 261 aa6.54□□□□□ -1.36
EFCAB11-213ENST00000557685 POLR2BP30876 1174 aaKnown RBP6.54□□□□□ -1.36
EFCAB11-213ENST00000557685 LRP8Q14114 963 aa6.54□□□□□ -1.36
EFCAB11-213ENST00000557685 NCAPHQ15003 741 aa6.54□□□□□ -1.36
EFCAB11-213ENST00000557685 BBS9Q3SYG4 887 aa6.54□□□□□ -1.36
EFCAB11-213ENST00000557685 ZNF746Q6NUN9 644 aaPredicted RBP6.54□□□□□ -1.36
EFCAB11-213ENST00000557685 CLEC10AQ8IUN9 316 aa6.54□□□□□ -1.36
EFCAB11-213ENST00000557685 FAM178BQ8IXR5 827 aa6.54□□□□□ -1.36
EFCAB11-213ENST00000557685 BAHD1Q8TBE0 780 aaPredicted RBP6.54□□□□□ -1.36
EFCAB11-213ENST00000557685 TP53INP1Q96A56 240 aa6.54□□□□□ -1.36
EFCAB11-213ENST00000557685 DEPDC7Q96QD5 511 aa6.54□□□□□ -1.36
EFCAB11-213ENST00000557685 KCNF1Q9H3M0 494 aa6.54□□□□□ -1.36
EFCAB11-213ENST00000557685 MAPK8IP1Q9UQF2 711 aa6.54□□□□□ -1.36
EFCAB11-213ENST00000557685 CADPSQ9ULU8 1353 aa6.54□□□□□ -1.36
EFCAB11-213ENST00000557685 PDPK1O15530 556 aa6.53□□□□□ -1.36
EFCAB11-213ENST00000557685 DYNC1LI2O43237 492 aaPredicted RBP6.53□□□□□ -1.36
EFCAB11-213ENST00000557685 SMARCA5O60264 1052 aaPredicted RBP6.53□□□□□ -1.36
EFCAB11-213ENST00000557685 PMS1P54277 932 aaKnown RBP6.53□□□□□ -1.36
EFCAB11-213ENST00000557685 SLC7A5Q01650 507 aa6.53□□□□□ -1.36
EFCAB11-213ENST00000557685 RASGRF1Q13972 1273 aa6.53□□□□□ -1.36
EFCAB11-213ENST00000557685 RASA3Q14644 834 aa6.53□□□□□ -1.36
EFCAB11-213ENST00000557685 NFKBIBQ15653 356 aa6.53□□□□□ -1.36
EFCAB11-213ENST00000557685 GNPTABQ3T906 1256 aa6.53□□□□□ -1.36
EFCAB11-213ENST00000557685 PAOXQ6QHF9 649 aa6.53□□□□□ -1.36
EFCAB11-213ENST00000557685 VHLLQ6RSH7 139 aa6.53□□□□□ -1.36
EFCAB11-213ENST00000557685 C6orf15Q6UXA7 325 aaPredicted RBP6.53□□□□□ -1.36
EFCAB11-213ENST00000557685 BEND4Q6ZU67 534 aa6.53□□□□□ -1.36
EFCAB11-213ENST00000557685 TMEM192Q8IY95 271 aa6.53□□□□□ -1.36
EFCAB11-213ENST00000557685 XAGE3Q8WTP9 111 aa6.53□□□□□ -1.36
EFCAB11-213ENST00000557685 PPP1R13LQ8WUF5 828 aa6.53□□□□□ -1.36
EFCAB11-213ENST00000557685 SLC6A18Q96N87 628 aa6.53□□□□□ -1.36
EFCAB11-213ENST00000557685 FAM83CQ9BQN1 747 aa6.53□□□□□ -1.36
EFCAB11-213ENST00000557685 LGR6Q9HBX8 967 aa6.53□□□□□ -1.36
EFCAB11-213ENST00000557685 C1GALT1Q9NS00 363 aa6.53□□□□□ -1.36
EFCAB11-213ENST00000557685 SNTG2Q9NY99 539 aa6.53□□□□□ -1.36
EFCAB11-213ENST00000557685 SUCOQ9UBS9 1254 aaKnown RBP6.53□□□□□ -1.36
EFCAB11-213ENST00000557685 FAM221BA6H8Z2 402 aa6.52□□□□□ -1.37
EFCAB11-213ENST00000557685 FAM86C2PA6NEL3 165 aa6.52□□□□□ -1.37
EFCAB11-213ENST00000557685 CLEC3AO75596 197 aa6.52□□□□□ -1.37
EFCAB11-213ENST00000557685 CHMP4BP1P59074 171 aa6.52□□□□□ -1.37
EFCAB11-213ENST00000557685 LETMD1Q6P1Q0 360 aa6.52□□□□□ -1.37
EFCAB11-213ENST00000557685 GIMAP7Q8NHV1 300 aa6.52□□□□□ -1.37
EFCAB11-213ENST00000557685 PRDM10Q9NQV6 1147 aa6.52□□□□□ -1.37
EFCAB11-213ENST00000557685 PCDHB10Q9UN67 800 aa6.52□□□□□ -1.37
EFCAB11-213ENST00000557685 TMA7Q9Y2S6 64 aaKnown RBP6.52□□□□□ -1.37
EFCAB11-213ENST00000557685 CCDC85CA6NKD9 419 aa6.51□□□□□ -1.37
EFCAB11-213ENST00000557685 HYAL3O43820 417 aaPredicted RBP6.51□□□□□ -1.37
EFCAB11-213ENST00000557685 SLITRK5O94991 958 aa6.51□□□□□ -1.37
EFCAB11-213ENST00000557685 CANXP27824 592 aaKnown RBP6.51□□□□□ -1.37
EFCAB11-213ENST00000557685 LCE3BQ5TA77 95 aa6.51□□□□□ -1.37
EFCAB11-213ENST00000557685 KIAA1211LQ6NV74 962 aa6.51□□□□□ -1.37
EFCAB11-213ENST00000557685 EEPD1Q7L9B9 569 aa6.51□□□□□ -1.37
EFCAB11-213ENST00000557685 DNAJB8Q8NHS0 232 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms