RNA–Protein interactions for RNA: ENST00000557599.5

PRKCH-227, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-227ENST00000557599 ZNF341Q9BYN7 854 aa12.44□□□□□ -0.42
PRKCH-227ENST00000557599 KRT23Q9C075 422 aa12.44□□□□□ -0.42
PRKCH-227ENST00000557599 ZFYVE28Q9HCC9 887 aa12.44□□□□□ -0.42
PRKCH-227ENST00000557599 TOMM22Q9NS69 142 aa12.44□□□□□ -0.42
PRKCH-227ENST00000557599 PDRG1Q9NUG6 133 aa12.44□□□□□ -0.42
PRKCH-227ENST00000557599 HLA-DOAP06340 250 aa12.43□□□□□ -0.42
PRKCH-227ENST00000557599 CTGFP29279 349 aa12.43□□□□□ -0.42
PRKCH-227ENST00000557599 LACTBP83111 547 aaPredicted RBP12.43□□□□□ -0.42
PRKCH-227ENST00000557599 PDE4BQ07343 736 aa12.43□□□□□ -0.42
PRKCH-227ENST00000557599 PPARAQ07869 468 aa12.43□□□□□ -0.42
PRKCH-227ENST00000557599 SNAPC2Q13487 334 aa12.43□□□□□ -0.42
PRKCH-227ENST00000557599 SART3Q15020 963 aaKnown RBP12.43□□□□□ -0.42
PRKCH-227ENST00000557599 SBK1Q52WX2 424 aa12.43□□□□□ -0.42
PRKCH-227ENST00000557599 C17orf99Q6UX52 265 aa12.43□□□□□ -0.42
PRKCH-227ENST00000557599 RUFY3Q7L099 469 aa12.43□□□□□ -0.42
PRKCH-227ENST00000557599 SH3BP5LQ7L8J4 393 aa12.43□□□□□ -0.42
PRKCH-227ENST00000557599 ANKRD23Q86SG2 305 aa12.43□□□□□ -0.42
PRKCH-227ENST00000557599 TTC6Q86TZ1 520 aa12.43□□□□□ -0.42
PRKCH-227ENST00000557599 MAPKAPK5Q8IW41 473 aa12.43□□□□□ -0.42
PRKCH-227ENST00000557599 RASEFQ8IZ41 740 aa12.43□□□□□ -0.42
PRKCH-227ENST00000557599 UPF3BQ9BZI7 483 aaKnown RBP12.43□□□□□ -0.42
PRKCH-227ENST00000557599 EPB41L4AQ9HCS5 686 aaPredicted RBP12.43□□□□□ -0.42
PRKCH-227ENST00000557599 DCP1AQ9NPI6 582 aaPredicted RBP12.43□□□□□ -0.42
PRKCH-227ENST00000557599 SZT2Q5T011 3432 aa12.43□□□□□ -0.42
PRKCH-227ENST00000557599 RANBP2P49792 3224 aaKnown RBP12.43□□□□□ -0.42
PRKCH-227ENST00000557599 LAMA4Q16363 1823 aa12.43□□□□□ -0.42
PRKCH-227ENST00000557599 NAV1Q8NEY1 1877 aa12.42□□□□□ -0.42
PRKCH-227ENST00000557599 USP17L12C9JPN9 530 aa12.42□□□□□ -0.42
PRKCH-227ENST00000557599 USP17L21D6R901 530 aa12.42□□□□□ -0.42
PRKCH-227ENST00000557599 E7EWF7 191 aa12.42□□□□□ -0.42
PRKCH-227ENST00000557599 ENTPD3O75355 529 aa12.42□□□□□ -0.42
PRKCH-227ENST00000557599 NPM3O75607 178 aaKnown RBP12.42□□□□□ -0.42
PRKCH-227ENST00000557599 WDHD1O75717 1129 aaPredicted RBP12.42□□□□□ -0.42
PRKCH-227ENST00000557599 AKNAD1Q5T1N1 836 aa12.42□□□□□ -0.42
PRKCH-227ENST00000557599 ZFPM1Q8IX07 1006 aa12.42□□□□□ -0.42
PRKCH-227ENST00000557599 CHMP4CQ96CF2 233 aa12.42□□□□□ -0.42
PRKCH-227ENST00000557599 KIF2CQ99661 725 aa12.42□□□□□ -0.42
PRKCH-227ENST00000557599 TRIM34Q9BYJ4 488 aa12.42□□□□□ -0.42
PRKCH-227ENST00000557599 ZSWIM6Q9HCJ5 1215 aa12.42□□□□□ -0.42
PRKCH-227ENST00000557599 BAZ2AQ9UIF9 1905 aaKnown RBP12.41□□□□□ -0.42
PRKCH-227ENST00000557599 ERICH2A1L162 156 aa12.41□□□□□ -0.42
PRKCH-227ENST00000557599 FOXP2O15409 715 aa12.41□□□□□ -0.42
PRKCH-227ENST00000557599 GNRH1P01148 92 aa12.41□□□□□ -0.42
PRKCH-227ENST00000557599 RPS6KB1P23443 525 aa12.41□□□□□ -0.42
PRKCH-227ENST00000557599 MCM5P33992 734 aa12.41□□□□□ -0.42
PRKCH-227ENST00000557599 RHBDL3P58872 404 aa12.41□□□□□ -0.42
PRKCH-227ENST00000557599 PICALMQ13492 652 aa12.41□□□□□ -0.42
PRKCH-227ENST00000557599 GPAT2Q6NUI2 795 aa12.41□□□□□ -0.42
PRKCH-227ENST00000557599 MIGA2Q7L4E1 593 aa12.41□□□□□ -0.42
PRKCH-227ENST00000557599 DHX32Q7L7V1 743 aaKnown RBP12.41□□□□□ -0.42
PRKCH-227ENST00000557599 STAG1Q8WVM7 1258 aa12.41□□□□□ -0.42
PRKCH-227ENST00000557599 ESR2Q92731 530 aa12.41□□□□□ -0.42
PRKCH-227ENST00000557599 ARHGAP39Q9C0H5 1083 aa12.41□□□□□ -0.42
PRKCH-227ENST00000557599 DHX36Q9H2U1 1008 aaKnown RBP12.41□□□□□ -0.42
PRKCH-227ENST00000557599 ANAPC4Q9UJX5 808 aa12.41□□□□□ -0.42
PRKCH-227ENST00000557599 TAOK2Q9UL54 1235 aa12.41□□□□□ -0.42
PRKCH-227ENST00000557599 PTCH2Q9Y6C5 1203 aa12.41□□□□□ -0.42
PRKCH-227ENST00000557599 FLT1P17948 1338 aa12.4□□□□□ -0.42
PRKCH-227ENST00000557599 WDR19Q8NEZ3 1342 aa12.4□□□□□ -0.42
PRKCH-227ENST00000557599 K7ELQ4 463 aaPredicted RBP12.4□□□□□ -0.42
PRKCH-227ENST00000557599 BCRP11274 1271 aa12.4□□□□□ -0.42
PRKCH-227ENST00000557599 TCP10Q12799 353 aa12.4□□□□□ -0.42
PRKCH-227ENST00000557599 ADCK5Q3MIX3 580 aa12.4□□□□□ -0.42
PRKCH-227ENST00000557599 RRP12Q5JTH9 1297 aaKnown RBP12.4□□□□□ -0.42
PRKCH-227ENST00000557599 CTR9Q6PD62 1173 aa12.4□□□□□ -0.42
PRKCH-227ENST00000557599 ZSCAN29Q8IWY8 852 aaPredicted RBP12.4□□□□□ -0.42
PRKCH-227ENST00000557599 ZSCAN31Q96LW9 406 aaPredicted RBP12.4□□□□□ -0.42
PRKCH-227ENST00000557599 MKNK2Q9HBH9 465 aa12.4□□□□□ -0.42
PRKCH-227ENST00000557599 DDX4Q9NQI0 724 aaKnown RBP12.4□□□□□ -0.42
PRKCH-227ENST00000557599 SAP30BPQ9UHR5 308 aaKnown RBP12.4□□□□□ -0.42
PRKCH-227ENST00000557599 DDX60LQ5H9U9 1706 aaKnown RBP12.4□□□□□ -0.43
PRKCH-227ENST00000557599 MYH1P12882 1939 aa12.39□□□□□ -0.43
PRKCH-227ENST00000557599 A0A0G2JLL6 359 aaPredicted RBP12.39□□□□□ -0.43
PRKCH-227ENST00000557599 CXCL11O14625 94 aa12.39□□□□□ -0.43
PRKCH-227ENST00000557599 PRMT2P55345 433 aa12.39□□□□□ -0.43
PRKCH-227ENST00000557599 CTDSPL2Q05D32 466 aa12.39□□□□□ -0.43
PRKCH-227ENST00000557599 CCDC178Q5BJE1 867 aa12.39□□□□□ -0.43
PRKCH-227ENST00000557599 PRRT2Q7Z6L0 340 aaPredicted RBP12.39□□□□□ -0.43
PRKCH-227ENST00000557599 IQCA1Q86XH1 822 aa12.39□□□□□ -0.43
PRKCH-227ENST00000557599 TBC1D10CQ8IV04 446 aa12.39□□□□□ -0.43
PRKCH-227ENST00000557599 UBAC1Q9BSL1 405 aa12.39□□□□□ -0.43
PRKCH-227ENST00000557599 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.39□□□□□ -0.43
PRKCH-227ENST00000557599 PCDH10Q9P2E7 1040 aa12.39□□□□□ -0.43
PRKCH-227ENST00000557599 DDTLA6NHG4 134 aaPredicted RBP12.38□□□□□ -0.43
PRKCH-227ENST00000557599 PRC1O43663 620 aa12.38□□□□□ -0.43
PRKCH-227ENST00000557599 TBC1D12O60347 775 aa12.38□□□□□ -0.43
PRKCH-227ENST00000557599 ARHGEF6Q15052 776 aa12.38□□□□□ -0.43
PRKCH-227ENST00000557599 C12orf60Q5U649 245 aa12.38□□□□□ -0.43
PRKCH-227ENST00000557599 SCYL3Q8IZE3 742 aa12.38□□□□□ -0.43
PRKCH-227ENST00000557599 ZNF444Q8N0Y2 327 aaPredicted RBP12.38□□□□□ -0.43
PRKCH-227ENST00000557599 CRACR2BQ8N4Y2 399 aaPredicted RBP12.38□□□□□ -0.43
PRKCH-227ENST00000557599 TMEM87BQ96K49 555 aa12.38□□□□□ -0.43
PRKCH-227ENST00000557599 TRIM47Q96LD4 638 aa12.38□□□□□ -0.43
PRKCH-227ENST00000557599 MTA3Q9BTC8 594 aa12.38□□□□□ -0.43
PRKCH-227ENST00000557599 TBC1D2Q9BYX2 928 aa12.38□□□□□ -0.43
PRKCH-227ENST00000557599 OSBPL5Q9H0X9 879 aaPredicted RBP12.38□□□□□ -0.43
PRKCH-227ENST00000557599 ALDH8A1Q9H2A2 487 aaPredicted RBP12.38□□□□□ -0.43
PRKCH-227ENST00000557599 SH2B1Q9NRF2 756 aaPredicted RBP12.38□□□□□ -0.43
PRKCH-227ENST00000557599 SWAP70Q9UH65 585 aa12.38□□□□□ -0.43
PRKCH-227ENST00000557599 LIMCH1Q9UPQ0 1083 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms