RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 FAM47AQ5JRC9 791 aa17.61■□□□□ 0.41
VIPAS39-210ENST00000557466 PTPN18Q99952 460 aa17.61■□□□□ 0.41
VIPAS39-210ENST00000557466 PCNTO95613 3336 aa17.6■□□□□ 0.41
VIPAS39-210ENST00000557466 IGKV6D-41A0A0C4DH26 115 aa17.6■□□□□ 0.41
VIPAS39-210ENST00000557466 CYP21A2P08686 494 aa17.6■□□□□ 0.41
VIPAS39-210ENST00000557466 TSPY3P0CV98 308 aa17.6■□□□□ 0.41
VIPAS39-210ENST00000557466 TSPY8P0CW00 308 aa17.6■□□□□ 0.41
VIPAS39-210ENST00000557466 INHBEP58166 350 aa17.6■□□□□ 0.41
VIPAS39-210ENST00000557466 RRP12Q5JTH9 1297 aaKnown RBP17.6■□□□□ 0.41
VIPAS39-210ENST00000557466 MFSD6Q6ZSS7 791 aa17.6■□□□□ 0.41
VIPAS39-210ENST00000557466 IFNL1Q8IU54 200 aa17.6■□□□□ 0.41
VIPAS39-210ENST00000557466 NKX2-3Q8TAU0 364 aa17.6■□□□□ 0.41
VIPAS39-210ENST00000557466 ACER1Q8TDN7 264 aa17.6■□□□□ 0.41
VIPAS39-210ENST00000557466 TOMM22Q9NS69 142 aa17.6■□□□□ 0.41
VIPAS39-210ENST00000557466 WBP1LQ9NX94 342 aa17.6■□□□□ 0.41
VIPAS39-210ENST00000557466 TAF6LQ9Y6J9 622 aa17.6■□□□□ 0.41
VIPAS39-210ENST00000557466 PCP11498 1178 aaKnown RBP17.59■□□□□ 0.41
VIPAS39-210ENST00000557466 HMGCS2P54868 508 aa17.59■□□□□ 0.41
VIPAS39-210ENST00000557466 BACE1P56817 501 aa17.59■□□□□ 0.41
VIPAS39-210ENST00000557466 TFAP4Q01664 338 aa17.59■□□□□ 0.41
VIPAS39-210ENST00000557466 SH3D19Q5HYK7 790 aa17.59■□□□□ 0.41
VIPAS39-210ENST00000557466 GADL1Q6ZQY3 521 aa17.59■□□□□ 0.41
VIPAS39-210ENST00000557466 SIAH1Q8IUQ4 282 aa17.59■□□□□ 0.41
VIPAS39-210ENST00000557466 FAM43AQ8N2R8 423 aa17.59■□□□□ 0.41
VIPAS39-210ENST00000557466 NEDD1Q8NHV4 660 aa17.59■□□□□ 0.41
VIPAS39-210ENST00000557466 FEZ1Q99689 392 aa17.59■□□□□ 0.41
VIPAS39-210ENST00000557466 RNF41Q9H4P4 317 aaPredicted RBP17.59■□□□□ 0.41
VIPAS39-210ENST00000557466 A0A1W2PRG0 241 aa17.58■□□□□ 0.4
VIPAS39-210ENST00000557466 TSPY2A6NKD2 308 aa17.58■□□□□ 0.4
VIPAS39-210ENST00000557466 BTBD19C9JJ37 291 aa17.58■□□□□ 0.4
VIPAS39-210ENST00000557466 USP17L10C9JJH3 530 aa17.58■□□□□ 0.4
VIPAS39-210ENST00000557466 RANBP6O60518 1105 aaKnown RBP17.58■□□□□ 0.4
VIPAS39-210ENST00000557466 HSPA1AP0DMV8 641 aaKnown RBP17.58■□□□□ 0.4
VIPAS39-210ENST00000557466 HSPA1BP0DMV9 641 aaKnown RBP17.58■□□□□ 0.4
VIPAS39-210ENST00000557466 ZYXQ15942 572 aaKnown RBP17.58■□□□□ 0.4
VIPAS39-210ENST00000557466 GPAT2Q6NUI2 795 aa17.58■□□□□ 0.4
VIPAS39-210ENST00000557466 CEP95Q96GE4 821 aa17.58■□□□□ 0.4
VIPAS39-210ENST00000557466 KIAA1683Q9H0B3 1180 aa17.58■□□□□ 0.4
VIPAS39-210ENST00000557466 KANSL2Q9H9L4 492 aa17.58■□□□□ 0.4
VIPAS39-210ENST00000557466 RNF186Q9NXI6 227 aa17.58■□□□□ 0.4
VIPAS39-210ENST00000557466 PARP14Q460N5 1801 aa17.58■□□□□ 0.4
VIPAS39-210ENST00000557466 C19orf81C9J6K1 198 aa17.57■□□□□ 0.4
VIPAS39-210ENST00000557466 EEF2P13639 858 aaKnown RBP17.57■□□□□ 0.4
VIPAS39-210ENST00000557466 NECTIN1Q15223 517 aa17.57■□□□□ 0.4
VIPAS39-210ENST00000557466 STOX1Q6ZVD7 989 aa17.57■□□□□ 0.4
VIPAS39-210ENST00000557466 FASTKD5Q7L8L6 764 aaKnown RBP17.57■□□□□ 0.4
VIPAS39-210ENST00000557466 ANKRD23Q86SG2 305 aa17.57■□□□□ 0.4
VIPAS39-210ENST00000557466 ARHGEF10LQ9HCE6 1279 aa17.57■□□□□ 0.4
VIPAS39-210ENST00000557466 B4E1Z4 1266 aa17.56■□□□□ 0.4
VIPAS39-210ENST00000557466 SLC27A2O14975 620 aa17.56■□□□□ 0.4
VIPAS39-210ENST00000557466 NMT2O60551 498 aa17.56■□□□□ 0.4
VIPAS39-210ENST00000557466 ATP2B2Q01814 1243 aa17.56■□□□□ 0.4
VIPAS39-210ENST00000557466 TREML2Q5T2D2 321 aa17.56■□□□□ 0.4
VIPAS39-210ENST00000557466 CREB3L3Q68CJ9 461 aa17.56■□□□□ 0.4
VIPAS39-210ENST00000557466 USP17L2Q6R6M4 530 aa17.56■□□□□ 0.4
VIPAS39-210ENST00000557466 PROCA1Q8NCQ7 364 aaPredicted RBP17.56■□□□□ 0.4
VIPAS39-210ENST00000557466 C12orf42Q96LP6 360 aa17.56■□□□□ 0.4
VIPAS39-210ENST00000557466 BEGAINQ9BUH8 593 aa17.56■□□□□ 0.4
VIPAS39-210ENST00000557466 IL17RBQ9NRM6 502 aa17.56■□□□□ 0.4
VIPAS39-210ENST00000557466 EMILIN3Q9NT22 766 aa17.56■□□□□ 0.4
VIPAS39-210ENST00000557466 MTMR4Q9NYA4 1195 aa17.56■□□□□ 0.4
VIPAS39-210ENST00000557466 TMOD4Q9NZQ9 345 aa17.56■□□□□ 0.4
VIPAS39-210ENST00000557466 AGTPBP1Q9UPW5 1226 aa17.56■□□□□ 0.4
VIPAS39-210ENST00000557466 TMX2Q9Y320 296 aa17.56■□□□□ 0.4
VIPAS39-210ENST00000557466 KDM4AO75164 1064 aa17.55■□□□□ 0.4
VIPAS39-210ENST00000557466 TRPA1O75762 1119 aa17.55■□□□□ 0.4
VIPAS39-210ENST00000557466 REC8O95072 547 aa17.55■□□□□ 0.4
VIPAS39-210ENST00000557466 OTUD7BQ6GQQ9 843 aa17.55■□□□□ 0.4
VIPAS39-210ENST00000557466 ESR2Q92731 530 aa17.55■□□□□ 0.4
VIPAS39-210ENST00000557466 ZCCHC17Q9NP64 241 aaKnown RBP17.55■□□□□ 0.4
VIPAS39-210ENST00000557466 SAGE1Q9NXZ1 904 aa17.55■□□□□ 0.4
VIPAS39-210ENST00000557466 NYAP2Q9P242 653 aa17.55■□□□□ 0.4
VIPAS39-210ENST00000557466 TSKSQ9UJT2 592 aa17.55■□□□□ 0.4
VIPAS39-210ENST00000557466 E7EWF7 191 aa17.54■□□□□ 0.4
VIPAS39-210ENST00000557466 PDHXO00330 501 aa17.54■□□□□ 0.4
VIPAS39-210ENST00000557466 FOXN1O15353 648 aa17.54■□□□□ 0.4
VIPAS39-210ENST00000557466 ALDH1A1P00352 501 aa17.54■□□□□ 0.4
VIPAS39-210ENST00000557466 USP14P54578 494 aa17.54■□□□□ 0.4
VIPAS39-210ENST00000557466 TAF1CQ15572 869 aaPredicted RBP17.54■□□□□ 0.4
VIPAS39-210ENST00000557466 KIAA1755Q5JYT7 1200 aa17.54■□□□□ 0.4
VIPAS39-210ENST00000557466 KRT23Q9C075 422 aa17.54■□□□□ 0.4
VIPAS39-210ENST00000557466 SH2D4AQ9H788 454 aa17.54■□□□□ 0.4
VIPAS39-210ENST00000557466 CNNM2Q9H8M5 875 aa17.54■□□□□ 0.4
VIPAS39-210ENST00000557466 RLFQ13129 1914 aa17.54■□□□□ 0.4
VIPAS39-210ENST00000557466 CA12O43570 354 aa17.53■□□□□ 0.4
VIPAS39-210ENST00000557466 TBC1D8O95759 1140 aa17.53■□□□□ 0.4
VIPAS39-210ENST00000557466 TTLL1O95922 423 aa17.53■□□□□ 0.4
VIPAS39-210ENST00000557466 VCAM1P19320 739 aa17.53■□□□□ 0.4
VIPAS39-210ENST00000557466 CRHR2Q13324 411 aa17.53■□□□□ 0.4
VIPAS39-210ENST00000557466 LRRC47Q8N1G4 583 aaKnown RBP17.53■□□□□ 0.4
VIPAS39-210ENST00000557466 R3HDMLQ9H3Y0 253 aa17.53■□□□□ 0.4
VIPAS39-210ENST00000557466 VCPKMTQ9H867 229 aa17.53■□□□□ 0.4
VIPAS39-210ENST00000557466 TCP11L1Q9NUJ3 509 aa17.53■□□□□ 0.4
VIPAS39-210ENST00000557466 CLIP2Q9UDT6 1046 aa17.53■□□□□ 0.4
VIPAS39-210ENST00000557466 SLC45A1Q9Y2W3 748 aa17.53■□□□□ 0.4
VIPAS39-210ENST00000557466 A0A0G2JMZ2 1700 aa17.52■□□□□ 0.4
VIPAS39-210ENST00000557466 NOVP48745 357 aa17.52■□□□□ 0.4
VIPAS39-210ENST00000557466 NT5C2P49902 561 aa17.52■□□□□ 0.4
VIPAS39-210ENST00000557466 CYB5R4Q7L1T6 521 aa17.52■□□□□ 0.4
VIPAS39-210ENST00000557466 ZKSCAN3Q9BRR0 538 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms