RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 NETO1Q8TDF5 533 aa6.22□□□□□ -1.41
CHD8-212ENST00000557329 TLR6Q9Y2C9 796 aa6.22□□□□□ -1.41
CHD8-212ENST00000557329 PTPRGP23470 1445 aa6.22□□□□□ -1.41
CHD8-212ENST00000557329 TOP2BQ02880 1626 aa6.21□□□□□ -1.41
CHD8-212ENST00000557329 SHROOM2Q13796 1616 aa6.21□□□□□ -1.41
CHD8-212ENST00000557329 ABCA10Q8WWZ4 1543 aa6.21□□□□□ -1.42
CHD8-212ENST00000557329 TMEM265A0A087WTH1 108 aa6.21□□□□□ -1.42
CHD8-212ENST00000557329 GNAT3A8MTJ3 354 aa6.21□□□□□ -1.42
CHD8-212ENST00000557329 DYNC1LI2O43237 492 aaPredicted RBP6.21□□□□□ -1.42
CHD8-212ENST00000557329 ETV3P41162 512 aa6.21□□□□□ -1.42
CHD8-212ENST00000557329 KIR3DL1P43629 444 aa6.21□□□□□ -1.42
CHD8-212ENST00000557329 CDK5R2Q13319 367 aa6.21□□□□□ -1.42
CHD8-212ENST00000557329 IFI16Q16666 785 aaKnown RBP6.21□□□□□ -1.42
CHD8-212ENST00000557329 MCATQ8IVS2 390 aaKnown RBP6.21□□□□□ -1.42
CHD8-212ENST00000557329 TOP6BLQ8N6T0 577 aa6.21□□□□□ -1.42
CHD8-212ENST00000557329 GOLM1Q8NBJ4 401 aa6.21□□□□□ -1.42
CHD8-212ENST00000557329 RGS22Q8NE09 1264 aa6.21□□□□□ -1.42
CHD8-212ENST00000557329 BACH2Q9BYV9 841 aa6.21□□□□□ -1.42
CHD8-212ENST00000557329 LGR6Q9HBX8 967 aa6.21□□□□□ -1.42
CHD8-212ENST00000557329 PRDM5Q9NQX1 630 aaPredicted RBP6.21□□□□□ -1.42
CHD8-212ENST00000557329 KBTBD4Q9NVX7 518 aa6.21□□□□□ -1.42
CHD8-212ENST00000557329 VAV3Q9UKW4 847 aa6.21□□□□□ -1.42
CHD8-212ENST00000557329 WRNQ14191 1432 aaPredicted RBP eCLIP6.21□□□□□ -1.42
CHD8-212ENST00000557329 ASXL2Q76L83 1435 aa6.21□□□□□ -1.42
CHD8-212ENST00000557329 ADAMTS12P58397 1594 aa6.21□□□□□ -1.42
CHD8-212ENST00000557329 ABCA5Q8WWZ7 1642 aa6.21□□□□□ -1.42
CHD8-212ENST00000557329 MINDY4BA8MYZ0 360 aa6.2□□□□□ -1.42
CHD8-212ENST00000557329 GREM1O60565 184 aa6.2□□□□□ -1.42
CHD8-212ENST00000557329 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.2□□□□□ -1.42
CHD8-212ENST00000557329 REC114Q7Z4M0 266 aa6.2□□□□□ -1.42
CHD8-212ENST00000557329 TMEM87BQ96K49 555 aa6.2□□□□□ -1.42
CHD8-212ENST00000557329 NT5C1AQ9BXI3 368 aa6.2□□□□□ -1.42
CHD8-212ENST00000557329 LRRC4CQ9HCJ2 640 aa6.2□□□□□ -1.42
CHD8-212ENST00000557329 ADGRE2Q9UHX3 823 aa6.2□□□□□ -1.42
CHD8-212ENST00000557329 F13A1P00488 732 aa6.19□□□□□ -1.42
CHD8-212ENST00000557329 PLCG1P19174 1290 aa6.19□□□□□ -1.42
CHD8-212ENST00000557329 CLCN7P51798 805 aa6.19□□□□□ -1.42
CHD8-212ENST00000557329 PRKCQQ04759 706 aa6.19□□□□□ -1.42
CHD8-212ENST00000557329 SLBPQ14493 270 aaKnown RBP eCLIP6.19□□□□□ -1.42
CHD8-212ENST00000557329 LRRFIP1Q32MZ4 808 aaKnown RBP6.19□□□□□ -1.42
CHD8-212ENST00000557329 BNC2Q6ZN30 1099 aaPredicted RBP6.19□□□□□ -1.42
CHD8-212ENST00000557329 REXO1Q8N1G1 1221 aaKnown RBP6.19□□□□□ -1.42
CHD8-212ENST00000557329 SLC5A6Q9Y289 635 aa6.19□□□□□ -1.42
CHD8-212ENST00000557329 PLB1Q6P1J6 1458 aa6.18□□□□□ -1.42
CHD8-212ENST00000557329 TEX14Q8IWB6 1497 aa6.18□□□□□ -1.42
CHD8-212ENST00000557329 CEACAM5P06731 702 aa6.18□□□□□ -1.42
CHD8-212ENST00000557329 IMPDH2P12268 514 aa6.18□□□□□ -1.42
CHD8-212ENST00000557329 ZNF165P49910 485 aa6.18□□□□□ -1.42
CHD8-212ENST00000557329 FANCCQ00597 558 aa6.18□□□□□ -1.42
CHD8-212ENST00000557329 COL9A2Q14055 689 aaPredicted RBP6.18□□□□□ -1.42
CHD8-212ENST00000557329 SFRP5Q5T4F7 317 aa6.18□□□□□ -1.42
CHD8-212ENST00000557329 LETMD1Q6P1Q0 360 aa6.18□□□□□ -1.42
CHD8-212ENST00000557329 USP48Q86UV5 1035 aa6.18□□□□□ -1.42
CHD8-212ENST00000557329 KIAA0825Q8IV33 1275 aa6.18□□□□□ -1.42
CHD8-212ENST00000557329 SLFN12Q8IYM2 578 aa6.18□□□□□ -1.42
CHD8-212ENST00000557329 ZNF296Q8WUU4 475 aaPredicted RBP6.18□□□□□ -1.42
CHD8-212ENST00000557329 ASB11Q8WXH4 323 aa6.18□□□□□ -1.42
CHD8-212ENST00000557329 MRRFQ96E11 262 aaKnown RBP6.18□□□□□ -1.42
CHD8-212ENST00000557329 ZC3H7BQ9UGR2 993 aaKnown RBP6.18□□□□□ -1.42
CHD8-212ENST00000557329 TPX2Q9ULW0 747 aaKnown RBP6.18□□□□□ -1.42
CHD8-212ENST00000557329 ATE1O95260 518 aa6.17□□□□□ -1.42
CHD8-212ENST00000557329 GARTP22102 1010 aa6.17□□□□□ -1.42
CHD8-212ENST00000557329 CCNFP41002 786 aa6.17□□□□□ -1.42
CHD8-212ENST00000557329 CHMP4BP1P59074 171 aa6.17□□□□□ -1.42
CHD8-212ENST00000557329 FAM160A1Q05DH4 1040 aa6.17□□□□□ -1.42
CHD8-212ENST00000557329 PRAMEF13Q5VWM6 474 aa6.17□□□□□ -1.42
CHD8-212ENST00000557329 FBXL19Q6PCT2 694 aa6.17□□□□□ -1.42
CHD8-212ENST00000557329 ZNF654Q8IZM8 581 aa6.17□□□□□ -1.42
CHD8-212ENST00000557329 PIWIL2Q8TC59 973 aaKnown RBP6.17□□□□□ -1.42
CHD8-212ENST00000557329 CYB5D2Q8WUJ1 264 aa6.17□□□□□ -1.42
CHD8-212ENST00000557329 HRASLS5Q96KN8 279 aa6.17□□□□□ -1.42
CHD8-212ENST00000557329 MIPEPQ99797 713 aa6.17□□□□□ -1.42
CHD8-212ENST00000557329 SPON2Q9BUD6 331 aa6.17□□□□□ -1.42
CHD8-212ENST00000557329 TJP2Q9UDY2 1190 aa6.17□□□□□ -1.42
CHD8-212ENST00000557329 CCDC39Q9UFE4 941 aa6.17□□□□□ -1.42
CHD8-212ENST00000557329 ZNF865P0CJ78 1059 aaPredicted RBP6.16□□□□□ -1.42
CHD8-212ENST00000557329 HOXA10P31260 410 aaPredicted RBP6.16□□□□□ -1.42
CHD8-212ENST00000557329 OXCT1P55809 520 aa6.16□□□□□ -1.42
CHD8-212ENST00000557329 RAD51AP2Q09MP3 1159 aa6.16□□□□□ -1.42
CHD8-212ENST00000557329 APOBRQ0VD83 1088 aa6.16□□□□□ -1.42
CHD8-212ENST00000557329 FAM13CQ8NE31 585 aa6.16□□□□□ -1.42
CHD8-212ENST00000557329 NKD1Q969G9 470 aa6.16□□□□□ -1.42
CHD8-212ENST00000557329 CCDC74BQ96LY2 380 aa6.16□□□□□ -1.42
CHD8-212ENST00000557329 TNKS2Q9H2K2 1166 aa6.16□□□□□ -1.42
CHD8-212ENST00000557329 FBRSQ9HAH7 460 aa6.16□□□□□ -1.42
CHD8-212ENST00000557329 CEP131Q9UPN4 1083 aa6.16□□□□□ -1.42
CHD8-212ENST00000557329 LEFTY1O75610 366 aa6.15□□□□□ -1.42
CHD8-212ENST00000557329 SLITRK5O94991 958 aa6.15□□□□□ -1.42
CHD8-212ENST00000557329 HTR3BO95264 441 aa6.15□□□□□ -1.42
CHD8-212ENST00000557329 EOMESO95936 686 aa6.15□□□□□ -1.42
CHD8-212ENST00000557329 RECKO95980 971 aa6.15□□□□□ -1.42
CHD8-212ENST00000557329 FAM214BQ7L5A3 538 aa6.15□□□□□ -1.42
CHD8-212ENST00000557329 THAP5Q7Z6K1 395 aa6.15□□□□□ -1.42
CHD8-212ENST00000557329 SLITRK4Q8IW52 837 aa6.15□□□□□ -1.42
CHD8-212ENST00000557329 ACSF2Q96CM8 615 aaPredicted RBP6.15□□□□□ -1.42
CHD8-212ENST00000557329 CCDC120Q96HB5 630 aa6.15□□□□□ -1.42
CHD8-212ENST00000557329 EHMT1Q9H9B1 1298 aa6.15□□□□□ -1.42
CHD8-212ENST00000557329 REV1Q9UBZ9 1251 aa6.15□□□□□ -1.42
CHD8-212ENST00000557329 KCNH3Q9ULD8 1083 aa6.15□□□□□ -1.42
CHD8-212ENST00000557329 CARMIL2Q6F5E8 1435 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms