RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 USP17L20D6RJB6 530 aa19.24■□□□□ 0.67
TUBB3-213ENST00000557262 CYP2B6P20813 491 aa19.24■□□□□ 0.67
TUBB3-213ENST00000557262 SHMT1P34896 483 aa19.24■□□□□ 0.67
TUBB3-213ENST00000557262 ERVK-9P63128 1117 aa19.24■□□□□ 0.67
TUBB3-213ENST00000557262 ERVK-24P63145 666 aa19.24■□□□□ 0.67
TUBB3-213ENST00000557262 USP17L24Q0WX57 530 aa19.24■□□□□ 0.67
TUBB3-213ENST00000557262 ZYXQ15942 572 aaKnown RBP19.24■□□□□ 0.67
TUBB3-213ENST00000557262 HMX1Q9NP08 348 aaPredicted RBP19.24■□□□□ 0.67
TUBB3-213ENST00000557262 MCM9Q9NXL9 1143 aa19.24■□□□□ 0.67
TUBB3-213ENST00000557262 XRCC5P13010 732 aaKnown RBP19.23■□□□□ 0.67
TUBB3-213ENST00000557262 ATP5JP18859 108 aa19.23■□□□□ 0.67
TUBB3-213ENST00000557262 GABPAQ06546 454 aa19.23■□□□□ 0.67
TUBB3-213ENST00000557262 POTEEQ6S8J3 1075 aa19.23■□□□□ 0.67
TUBB3-213ENST00000557262 CATSPERGQ6ZRH7 1159 aa19.23■□□□□ 0.67
TUBB3-213ENST00000557262 SOCS4Q8WXH5 440 aa19.23■□□□□ 0.67
TUBB3-213ENST00000557262 PAGR1Q9BTK6 254 aa19.23■□□□□ 0.67
TUBB3-213ENST00000557262 BOLA2Q9H3K6 86 aa19.23■□□□□ 0.67
TUBB3-213ENST00000557262 PAG1Q9NWQ8 432 aa19.23■□□□□ 0.67
TUBB3-213ENST00000557262 RABGAP1Q9Y3P9 1069 aa19.23■□□□□ 0.67
TUBB3-213ENST00000557262 FXR1P51114 621 aaKnown RBP eCLIP19.22■□□□□ 0.67
TUBB3-213ENST00000557262 TRIM32Q13049 653 aa19.22■□□□□ 0.67
TUBB3-213ENST00000557262 PDE3AQ14432 1141 aa19.22■□□□□ 0.67
TUBB3-213ENST00000557262 TRMT44Q8IYL2 757 aaKnown RBP19.22■□□□□ 0.67
TUBB3-213ENST00000557262 ACER1Q8TDN7 264 aa19.22■□□□□ 0.67
TUBB3-213ENST00000557262 TRIB2Q92519 343 aa19.22■□□□□ 0.67
TUBB3-213ENST00000557262 EDC3Q96F86 508 aaKnown RBP19.22■□□□□ 0.67
TUBB3-213ENST00000557262 PORCNQ9H237 461 aa19.22■□□□□ 0.67
TUBB3-213ENST00000557262 DCP1AQ9NPI6 582 aaPredicted RBP19.22■□□□□ 0.67
TUBB3-213ENST00000557262 GUCY1A2P33402 732 aa19.21■□□□□ 0.67
TUBB3-213ENST00000557262 CHRDL2Q6WN34 429 aa19.21■□□□□ 0.67
TUBB3-213ENST00000557262 GPR142Q7Z601 462 aa19.21■□□□□ 0.67
TUBB3-213ENST00000557262 PLEKHH3Q7Z736 793 aa19.21■□□□□ 0.67
TUBB3-213ENST00000557262 LCORLQ8N3X6 602 aa19.21■□□□□ 0.67
TUBB3-213ENST00000557262 ANKLE1Q8NAG6 615 aa19.21■□□□□ 0.67
TUBB3-213ENST00000557262 SDR42E1Q8WUS8 393 aa19.21■□□□□ 0.67
TUBB3-213ENST00000557262 USP6NLQ92738 828 aa19.21■□□□□ 0.67
TUBB3-213ENST00000557262 PAWRQ96IZ0 340 aaKnown RBP19.21■□□□□ 0.67
TUBB3-213ENST00000557262 EVI5O60447 810 aa19.2■□□□□ 0.66
TUBB3-213ENST00000557262 ADD2P35612 726 aa19.2■□□□□ 0.66
TUBB3-213ENST00000557262 CCNA1P78396 465 aa19.2■□□□□ 0.66
TUBB3-213ENST00000557262 SEPT2Q15019 361 aa19.2■□□□□ 0.66
TUBB3-213ENST00000557262 MORN1Q5T089 497 aa19.2■□□□□ 0.66
TUBB3-213ENST00000557262 NECAB2Q7Z6G3 386 aa19.2■□□□□ 0.66
TUBB3-213ENST00000557262 HAUS7Q99871 368 aa19.2■□□□□ 0.66
TUBB3-213ENST00000557262 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.2■□□□□ 0.66
TUBB3-213ENST00000557262 ARMT1Q9H993 441 aa19.2■□□□□ 0.66
TUBB3-213ENST00000557262 MPHOSPH10O00566 681 aaKnown RBP19.19■□□□□ 0.66
TUBB3-213ENST00000557262 CNMDO75829 334 aa19.19■□□□□ 0.66
TUBB3-213ENST00000557262 VCAM1P19320 739 aa19.19■□□□□ 0.66
TUBB3-213ENST00000557262 RGS2P41220 211 aa19.19■□□□□ 0.66
TUBB3-213ENST00000557262 EVX2Q03828 476 aa19.19■□□□□ 0.66
TUBB3-213ENST00000557262 MAP3K21Q5TCX8 1036 aa19.19■□□□□ 0.66
TUBB3-213ENST00000557262 LBX2Q6XYB7 198 aa19.19■□□□□ 0.66
TUBB3-213ENST00000557262 LRRCC1Q9C099 1032 aa19.19■□□□□ 0.66
TUBB3-213ENST00000557262 CWC22Q9HCG8 908 aaKnown RBP19.19■□□□□ 0.66
TUBB3-213ENST00000557262 ATP8A2Q9NTI2 1148 aa19.19■□□□□ 0.66
TUBB3-213ENST00000557262 SWAP70Q9UH65 585 aa19.19■□□□□ 0.66
TUBB3-213ENST00000557262 PRKAB2O43741 272 aa19.18■□□□□ 0.66
TUBB3-213ENST00000557262 GLRX3O76003 335 aaKnown RBP19.18■□□□□ 0.66
TUBB3-213ENST00000557262 C20orf194Q5TEA3 1177 aa19.18■□□□□ 0.66
TUBB3-213ENST00000557262 RPAP3Q9H6T3 665 aaPredicted RBP19.18■□□□□ 0.66
TUBB3-213ENST00000557262 RBM27Q9P2N5 1060 aaKnown RBP19.18■□□□□ 0.66
TUBB3-213ENST00000557262 PLXNB2O15031 1838 aa19.18■□□□□ 0.66
TUBB3-213ENST00000557262 TRIOBPQ9H2D6 2365 aa19.17■□□□□ 0.66
TUBB3-213ENST00000557262 MBD4O95243 580 aa19.17■□□□□ 0.66
TUBB3-213ENST00000557262 CYP2D6P10635 497 aa19.17■□□□□ 0.66
TUBB3-213ENST00000557262 PRKAR2AP13861 404 aaKnown RBP19.17■□□□□ 0.66
TUBB3-213ENST00000557262 ZKSCAN1P17029 563 aaPredicted RBP19.17■□□□□ 0.66
TUBB3-213ENST00000557262 CACNB2Q08289 660 aaPredicted RBP19.17■□□□□ 0.66
TUBB3-213ENST00000557262 UBE3CQ15386 1083 aa19.17■□□□□ 0.66
TUBB3-213ENST00000557262 SLFNL1Q499Z3 407 aa19.17■□□□□ 0.66
TUBB3-213ENST00000557262 DIS3LQ8TF46 1054 aaKnown RBP19.17■□□□□ 0.66
TUBB3-213ENST00000557262 HOXC10Q9NYD6 342 aa19.17■□□□□ 0.66
TUBB3-213ENST00000557262 OGDHLQ9ULD0 1010 aa19.17■□□□□ 0.66
TUBB3-213ENST00000557262 A0A1W2PRG0 241 aa19.16■□□□□ 0.66
TUBB3-213ENST00000557262 MAP2K5Q13163 448 aa19.16■□□□□ 0.66
TUBB3-213ENST00000557262 COG2Q14746 738 aa19.16■□□□□ 0.66
TUBB3-213ENST00000557262 ZSCAN25Q6NSZ9 544 aa19.16■□□□□ 0.66
TUBB3-213ENST00000557262 TMEM179Q6ZVK1 233 aa19.16■□□□□ 0.66
TUBB3-213ENST00000557262 DYNLL2Q96FJ2 89 aa19.16■□□□□ 0.66
TUBB3-213ENST00000557262 NBPF3Q9H094 633 aa19.16■□□□□ 0.66
TUBB3-213ENST00000557262 BTBD7Q9P203 1132 aa19.16■□□□□ 0.66
TUBB3-213ENST00000557262 RANBP2P49792 3224 aaKnown RBP19.15■□□□□ 0.66
TUBB3-213ENST00000557262 SLC15A5A6NIM6 579 aa19.15■□□□□ 0.66
TUBB3-213ENST00000557262 SPDYE16A6NNV3 312 aaPredicted RBP19.15■□□□□ 0.66
TUBB3-213ENST00000557262 SMARCA5O60264 1052 aaPredicted RBP19.15■□□□□ 0.66
TUBB3-213ENST00000557262 PTPREP23469 700 aa19.15■□□□□ 0.66
TUBB3-213ENST00000557262 CCL14Q16627 93 aa19.15■□□□□ 0.66
TUBB3-213ENST00000557262 C12orf60Q5U649 245 aa19.15■□□□□ 0.66
TUBB3-213ENST00000557262 WDR78Q5VTH9 848 aa19.15■□□□□ 0.66
TUBB3-213ENST00000557262 AMOTL1Q8IY63 956 aa19.15■□□□□ 0.66
TUBB3-213ENST00000557262 SLC44A5Q8NCS7 719 aa19.15■□□□□ 0.66
TUBB3-213ENST00000557262 CCDC17Q96LX7 622 aa19.15■□□□□ 0.66
TUBB3-213ENST00000557262 APBA2Q99767 749 aa19.15■□□□□ 0.66
TUBB3-213ENST00000557262 PRO3102Q9H379 93 aa19.15■□□□□ 0.66
TUBB3-213ENST00000557262 USP17L12C9JPN9 530 aa19.14■□□□□ 0.65
TUBB3-213ENST00000557262 USP17L21D6R901 530 aa19.14■□□□□ 0.65
TUBB3-213ENST00000557262 MNX1P50219 401 aaPredicted RBP19.14■□□□□ 0.65
TUBB3-213ENST00000557262 DDRGK1Q96HY6 314 aa19.14■□□□□ 0.65
TUBB3-213ENST00000557262 IVNS1ABPQ9Y6Y0 642 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms