RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 DDX60LQ5H9U9 1706 aaKnown RBP13.06□□□□□ -0.32
HNRNPC-230ENST00000557201 IDH1O75874 414 aaKnown RBP13.06□□□□□ -0.32
HNRNPC-230ENST00000557201 CACNB2Q08289 660 aaPredicted RBP13.06□□□□□ -0.32
HNRNPC-230ENST00000557201 LHX8Q68G74 356 aa13.06□□□□□ -0.32
HNRNPC-230ENST00000557201 TMED8Q6PL24 325 aaPredicted RBP13.06□□□□□ -0.32
HNRNPC-230ENST00000557201 GPR142Q7Z601 462 aa13.06□□□□□ -0.32
HNRNPC-230ENST00000557201 ITPRIPQ8IWB1 547 aa13.06□□□□□ -0.32
HNRNPC-230ENST00000557201 MAGEB6Q8N7X4 407 aa13.06□□□□□ -0.32
HNRNPC-230ENST00000557201 PANK1Q8TE04 598 aa13.06□□□□□ -0.32
HNRNPC-230ENST00000557201 RIOK1Q9BRS2 568 aaKnown RBP13.06□□□□□ -0.32
HNRNPC-230ENST00000557201 TRIM34Q9BYJ4 488 aa13.06□□□□□ -0.32
HNRNPC-230ENST00000557201 PFASO15067 1338 aa13.05□□□□□ -0.32
HNRNPC-230ENST00000557201 COL6A1P12109 1028 aa13.05□□□□□ -0.32
HNRNPC-230ENST00000557201 SHMT1P34896 483 aa13.05□□□□□ -0.32
HNRNPC-230ENST00000557201 CCL14Q16627 93 aa13.05□□□□□ -0.32
HNRNPC-230ENST00000557201 LBX2Q6XYB7 198 aa13.05□□□□□ -0.32
HNRNPC-230ENST00000557201 TRMT44Q8IYL2 757 aaKnown RBP13.05□□□□□ -0.32
HNRNPC-230ENST00000557201 C7orf61Q8IZ16 206 aa13.05□□□□□ -0.32
HNRNPC-230ENST00000557201 LRCH3Q96II8 777 aa13.05□□□□□ -0.32
HNRNPC-230ENST00000557201 KIAA1683Q9H0B3 1180 aa13.05□□□□□ -0.32
HNRNPC-230ENST00000557201 C11orf49Q9H6J7 331 aa13.05□□□□□ -0.32
HNRNPC-230ENST00000557201 SERPINB13Q9UIV8 391 aa13.05□□□□□ -0.32
HNRNPC-230ENST00000557201 MYH1P12882 1939 aa13.04□□□□□ -0.32
HNRNPC-230ENST00000557201 USP17L15C9J2P7 530 aa13.04□□□□□ -0.32
HNRNPC-230ENST00000557201 USP17L13C9JLJ4 530 aa13.04□□□□□ -0.32
HNRNPC-230ENST00000557201 USP17L11C9JVI0 530 aa13.04□□□□□ -0.32
HNRNPC-230ENST00000557201 USP17L18D6R9N7 530 aa13.04□□□□□ -0.32
HNRNPC-230ENST00000557201 USP17L22D6RA61 530 aa13.04□□□□□ -0.32
HNRNPC-230ENST00000557201 USP17L17D6RBQ6 530 aa13.04□□□□□ -0.32
HNRNPC-230ENST00000557201 USP17L19D6RCP7 530 aa13.04□□□□□ -0.32
HNRNPC-230ENST00000557201 USP17L20D6RJB6 530 aa13.04□□□□□ -0.32
HNRNPC-230ENST00000557201 IGHA2P01877 340 aa13.04□□□□□ -0.32
HNRNPC-230ENST00000557201 ZKSCAN1P17029 563 aaPredicted RBP13.04□□□□□ -0.32
HNRNPC-230ENST00000557201 GUCY1A2P33402 732 aa13.04□□□□□ -0.32
HNRNPC-230ENST00000557201 RGS2P41220 211 aa13.04□□□□□ -0.32
HNRNPC-230ENST00000557201 PLCD1P51178 756 aa13.04□□□□□ -0.32
HNRNPC-230ENST00000557201 GABPAQ06546 454 aa13.04□□□□□ -0.32
HNRNPC-230ENST00000557201 USP17L24Q0WX57 530 aa13.04□□□□□ -0.32
HNRNPC-230ENST00000557201 C20orf194Q5TEA3 1177 aa13.04□□□□□ -0.32
HNRNPC-230ENST00000557201 CATSPERGQ6ZRH7 1159 aa13.04□□□□□ -0.32
HNRNPC-230ENST00000557201 PLEKHH3Q7Z736 793 aa13.04□□□□□ -0.32
HNRNPC-230ENST00000557201 ACER1Q8TDN7 264 aa13.04□□□□□ -0.32
HNRNPC-230ENST00000557201 APBA2Q99767 749 aa13.04□□□□□ -0.32
HNRNPC-230ENST00000557201 PAGR1Q9BTK6 254 aa13.04□□□□□ -0.32
HNRNPC-230ENST00000557201 ZMYND8Q9ULU4 1186 aaPredicted RBP13.04□□□□□ -0.32
HNRNPC-230ENST00000557201 RABGAP1Q9Y3P9 1069 aa13.04□□□□□ -0.32
HNRNPC-230ENST00000557201 COL6A3P12111 3177 aa13.03□□□□□ -0.32
HNRNPC-230ENST00000557201 VCAM1P19320 739 aa13.03□□□□□ -0.32
HNRNPC-230ENST00000557201 CCND3P30281 292 aaPredicted RBP13.03□□□□□ -0.32
HNRNPC-230ENST00000557201 USP5P45974 858 aa13.03□□□□□ -0.32
HNRNPC-230ENST00000557201 MAP3K12Q12852 859 aa13.03□□□□□ -0.32
HNRNPC-230ENST00000557201 MAP2K5Q13163 448 aa13.03□□□□□ -0.32
HNRNPC-230ENST00000557201 MKRN4PQ13434 485 aaPredicted RBP13.03□□□□□ -0.32
HNRNPC-230ENST00000557201 CERKLQ49MI3 558 aaPredicted RBP13.03□□□□□ -0.32
HNRNPC-230ENST00000557201 TTC6Q86TZ1 520 aa13.03□□□□□ -0.32
HNRNPC-230ENST00000557201 EXOC6BQ9Y2D4 811 aa13.03□□□□□ -0.32
HNRNPC-230ENST00000557201 SUPT16HQ9Y5B9 1047 aaKnown RBP13.03□□□□□ -0.32
HNRNPC-230ENST00000557201 CENPBP07199 599 aaPredicted RBP13.02□□□□□ -0.33
HNRNPC-230ENST00000557201 USP14P54578 494 aa13.02□□□□□ -0.33
HNRNPC-230ENST00000557201 EVX2Q03828 476 aa13.02□□□□□ -0.33
HNRNPC-230ENST00000557201 ZYXQ15942 572 aaKnown RBP13.02□□□□□ -0.33
HNRNPC-230ENST00000557201 ABCB5Q2M3G0 1257 aa13.02□□□□□ -0.33
HNRNPC-230ENST00000557201 AACSQ86V21 672 aa13.02□□□□□ -0.33
HNRNPC-230ENST00000557201 ERC1Q8IUD2 1116 aa13.02□□□□□ -0.33
HNRNPC-230ENST00000557201 CHMP4BQ9H444 224 aaKnown RBP13.02□□□□□ -0.33
HNRNPC-230ENST00000557201 FLRT1Q9NZU1 646 aa13.02□□□□□ -0.33
HNRNPC-230ENST00000557201 BTBD7Q9P203 1132 aa13.02□□□□□ -0.33
HNRNPC-230ENST00000557201 DDX19BQ9UMR2 479 aa13.02□□□□□ -0.33
HNRNPC-230ENST00000557201 SLC15A5A6NIM6 579 aa13.01□□□□□ -0.33
HNRNPC-230ENST00000557201 SPDYE16A6NNV3 312 aaPredicted RBP13.01□□□□□ -0.33
HNRNPC-230ENST00000557201 HOXC6P09630 235 aa13.01□□□□□ -0.33
HNRNPC-230ENST00000557201 SYN1P17600 705 aa13.01□□□□□ -0.33
HNRNPC-230ENST00000557201 PTPREP23469 700 aa13.01□□□□□ -0.33
HNRNPC-230ENST00000557201 MAGEA10P43363 369 aaPredicted RBP13.01□□□□□ -0.33
HNRNPC-230ENST00000557201 RAB3GAP1Q15042 981 aa13.01□□□□□ -0.33
HNRNPC-230ENST00000557201 GPR153Q6NV75 609 aa13.01□□□□□ -0.33
HNRNPC-230ENST00000557201 RHPN1Q8TCX5 695 aa13.01□□□□□ -0.33
HNRNPC-230ENST00000557201 EDC3Q96F86 508 aaKnown RBP13.01□□□□□ -0.33
HNRNPC-230ENST00000557201 FEZ1Q99689 392 aa13.01□□□□□ -0.33
HNRNPC-230ENST00000557201 COG6Q9Y2V7 657 aa13.01□□□□□ -0.33
HNRNPC-230ENST00000557201 A0A1W2PRG0 241 aa13□□□□□ -0.33
HNRNPC-230ENST00000557201 TCRBV5S4A2TA0A5A2 114 aa13□□□□□ -0.33
HNRNPC-230ENST00000557201 PDE6AP16499 860 aa13□□□□□ -0.33
HNRNPC-230ENST00000557201 CCNA1P78396 465 aa13□□□□□ -0.33
HNRNPC-230ENST00000557201 GRB14Q14449 540 aa13□□□□□ -0.33
HNRNPC-230ENST00000557201 SEPT2Q15019 361 aa13□□□□□ -0.33
HNRNPC-230ENST00000557201 LRRC26Q2I0M4 334 aa13□□□□□ -0.33
HNRNPC-230ENST00000557201 LRIT3Q3SXY7 679 aa13□□□□□ -0.33
HNRNPC-230ENST00000557201 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13□□□□□ -0.33
HNRNPC-230ENST00000557201 IL1RAPL2Q9NP60 686 aa13□□□□□ -0.33
HNRNPC-230ENST00000557201 ZBTB40Q9NUA8 1239 aa13□□□□□ -0.33
HNRNPC-230ENST00000557201 MAGEB6P1A0A0J9YX57 407 aa12.99□□□□□ -0.33
HNRNPC-230ENST00000557201 TTF1Q15361 905 aaPredicted RBP12.99□□□□□ -0.33
HNRNPC-230ENST00000557201 CCAR1Q8IX12 1150 aaKnown RBP12.99□□□□□ -0.33
HNRNPC-230ENST00000557201 NPLOC4Q8TAT6 608 aa12.99□□□□□ -0.33
HNRNPC-230ENST00000557201 RPAP3Q9H6T3 665 aaPredicted RBP12.99□□□□□ -0.33
HNRNPC-230ENST00000557201 CABP5Q9NP86 173 aa12.99□□□□□ -0.33
HNRNPC-230ENST00000557201 FRMPD3Q5JV73 1810 aa12.98□□□□□ -0.33
HNRNPC-230ENST00000557201 GLRX3O76003 335 aaKnown RBP12.98□□□□□ -0.33
HNRNPC-230ENST00000557201 POLR3DP05423 398 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms