RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 SEPT2Q15019 361 aa27.27■■□□□ 1.96
TMEM260-214ENST00000556975 DDRGK1Q96HY6 314 aa27.27■■□□□ 1.96
TMEM260-214ENST00000556975 STRBPQ96SI9 672 aaKnown RBP27.27■■□□□ 1.96
TMEM260-214ENST00000556975 RBPJLQ9UBG7 517 aa27.27■■□□□ 1.96
TMEM260-214ENST00000556975 BAZ2AQ9UIF9 1905 aaKnown RBP27.27■■□□□ 1.96
TMEM260-214ENST00000556975 USP17L15C9J2P7 530 aa27.26■■□□□ 1.95
TMEM260-214ENST00000556975 USP17L13C9JLJ4 530 aa27.26■■□□□ 1.95
TMEM260-214ENST00000556975 USP17L12C9JPN9 530 aa27.26■■□□□ 1.95
TMEM260-214ENST00000556975 USP17L11C9JVI0 530 aa27.26■■□□□ 1.95
TMEM260-214ENST00000556975 USP17L21D6R901 530 aa27.26■■□□□ 1.95
TMEM260-214ENST00000556975 USP17L18D6R9N7 530 aa27.26■■□□□ 1.95
TMEM260-214ENST00000556975 USP17L22D6RA61 530 aa27.26■■□□□ 1.95
TMEM260-214ENST00000556975 USP17L17D6RBQ6 530 aa27.26■■□□□ 1.95
TMEM260-214ENST00000556975 USP17L19D6RCP7 530 aa27.26■■□□□ 1.95
TMEM260-214ENST00000556975 USP17L20D6RJB6 530 aa27.26■■□□□ 1.95
TMEM260-214ENST00000556975 ERC2O15083 957 aa27.26■■□□□ 1.95
TMEM260-214ENST00000556975 ZFYP08048 801 aaPredicted RBP27.26■■□□□ 1.95
TMEM260-214ENST00000556975 USP17L24Q0WX57 530 aa27.26■■□□□ 1.95
TMEM260-214ENST00000556975 AMOTL1Q8IY63 956 aa27.26■■□□□ 1.95
TMEM260-214ENST00000556975 DYNLL2Q96FJ2 89 aa27.26■■□□□ 1.95
TMEM260-214ENST00000556975 TXNRD2Q9NNW7 524 aa27.26■■□□□ 1.95
TMEM260-214ENST00000556975 RNF113AO15541 343 aaKnown RBP27.25■■□□□ 1.95
TMEM260-214ENST00000556975 AAMPQ13685 434 aa27.25■■□□□ 1.95
TMEM260-214ENST00000556975 ZYXQ15942 572 aaKnown RBP27.25■■□□□ 1.95
TMEM260-214ENST00000556975 CATSPERGQ6ZRH7 1159 aa27.25■■□□□ 1.95
TMEM260-214ENST00000556975 TMEM179Q6ZVK1 233 aa27.25■■□□□ 1.95
TMEM260-214ENST00000556975 SLC44A5Q8NCS7 719 aa27.25■■□□□ 1.95
TMEM260-214ENST00000556975 GPRC5AQ8NFJ5 357 aa27.25■■□□□ 1.95
TMEM260-214ENST00000556975 PI4K2BQ8TCG2 481 aa27.25■■□□□ 1.95
TMEM260-214ENST00000556975 APPBP2Q92624 585 aa27.25■■□□□ 1.95
TMEM260-214ENST00000556975 BIN2Q9UBW5 565 aaPredicted RBP27.25■■□□□ 1.95
TMEM260-214ENST00000556975 GJD2Q9UKL4 321 aa27.25■■□□□ 1.95
TMEM260-214ENST00000556975 GLRX3O76003 335 aaKnown RBP27.24■■□□□ 1.95
TMEM260-214ENST00000556975 HDAC1Q13547 482 aaPredicted RBP27.24■■□□□ 1.95
TMEM260-214ENST00000556975 CTR9Q6PD62 1173 aa27.24■■□□□ 1.95
TMEM260-214ENST00000556975 OSBP2Q969R2 916 aa27.24■■□□□ 1.95
TMEM260-214ENST00000556975 CCDC17Q96LX7 622 aa27.24■■□□□ 1.95
TMEM260-214ENST00000556975 MPHOSPH10O00566 681 aaKnown RBP27.23■■□□□ 1.95
TMEM260-214ENST00000556975 GJB1P08034 283 aa27.23■■□□□ 1.95
TMEM260-214ENST00000556975 CCL5P13501 91 aa27.23■■□□□ 1.95
TMEM260-214ENST00000556975 VCAM1P19320 739 aa27.23■■□□□ 1.95
TMEM260-214ENST00000556975 CDK8P49336 464 aa27.23■■□□□ 1.95
TMEM260-214ENST00000556975 LRRFIP1Q32MZ4 808 aaKnown RBP27.23■■□□□ 1.95
TMEM260-214ENST00000556975 GIMAP6Q6P9H5 292 aa27.23■■□□□ 1.95
TMEM260-214ENST00000556975 POTEEQ6S8J3 1075 aa27.23■■□□□ 1.95
TMEM260-214ENST00000556975 C16orf86Q6ZW13 317 aa27.23■■□□□ 1.95
TMEM260-214ENST00000556975 NKX2-3Q8TAU0 364 aa27.23■■□□□ 1.95
TMEM260-214ENST00000556975 GCC1Q96CN9 775 aa27.23■■□□□ 1.95
TMEM260-214ENST00000556975 CYP2D7A0A087X1C5 515 aa27.22■■□□□ 1.95
TMEM260-214ENST00000556975 A0A1W2PRG0 241 aa27.22■■□□□ 1.95
TMEM260-214ENST00000556975 ELNP15502 786 aa27.22■■□□□ 1.95
TMEM260-214ENST00000556975 Q3C1V9 767 aa27.22■■□□□ 1.95
TMEM260-214ENST00000556975 OTUD7AQ8TE49 926 aaPredicted RBP27.22■■□□□ 1.95
TMEM260-214ENST00000556975 ARPP21Q9UBL0 812 aaPredicted RBP27.22■■□□□ 1.95
TMEM260-214ENST00000556975 SALL3Q9BXA9 1300 aa27.21■■□□□ 1.95
TMEM260-214ENST00000556975 GSG1L2A8MUP6 293 aa27.21■■□□□ 1.95
TMEM260-214ENST00000556975 SMIM22K7EJ46 135 aa27.21■■□□□ 1.95
TMEM260-214ENST00000556975 AKR1B1P15121 316 aa27.21■■□□□ 1.95
TMEM260-214ENST00000556975 GJA8P48165 433 aa27.21■■□□□ 1.95
TMEM260-214ENST00000556975 ERVK-9P63128 1117 aa27.21■■□□□ 1.95
TMEM260-214ENST00000556975 ERVK-24P63145 666 aa27.21■■□□□ 1.95
TMEM260-214ENST00000556975 SBK1Q52WX2 424 aa27.21■■□□□ 1.95
TMEM260-214ENST00000556975 LBX2Q6XYB7 198 aa27.21■■□□□ 1.95
TMEM260-214ENST00000556975 RNF208Q9H0X6 261 aa27.21■■□□□ 1.95
TMEM260-214ENST00000556975 PCDH10Q9P2E7 1040 aa27.21■■□□□ 1.95
TMEM260-214ENST00000556975 RABGAP1Q9Y3P9 1069 aa27.21■■□□□ 1.95
TMEM260-214ENST00000556975 MYH8P13535 1937 aa27.21■■□□□ 1.95
TMEM260-214ENST00000556975 PEX10O60683 326 aa27.2■■□□□ 1.94
TMEM260-214ENST00000556975 MX1P20591 662 aa27.2■■□□□ 1.94
TMEM260-214ENST00000556975 MAPK4P31152 587 aa27.2■■□□□ 1.94
TMEM260-214ENST00000556975 SIAH1Q8IUQ4 282 aa27.2■■□□□ 1.94
TMEM260-214ENST00000556975 INHAP05111 366 aa27.19■■□□□ 1.94
TMEM260-214ENST00000556975 ANKRD45Q5TZF3 282 aa27.19■■□□□ 1.94
TMEM260-214ENST00000556975 SHISA4Q96DD7 197 aa27.19■■□□□ 1.94
TMEM260-214ENST00000556975 GPAA1O43292 621 aa27.18■■□□□ 1.94
TMEM260-214ENST00000556975 GNAT2P19087 354 aa27.18■■□□□ 1.94
TMEM260-214ENST00000556975 UNC93B1Q9H1C4 597 aa27.18■■□□□ 1.94
TMEM260-214ENST00000556975 RPAP3Q9H6T3 665 aaPredicted RBP27.18■■□□□ 1.94
TMEM260-214ENST00000556975 ZBTB47Q9UFB7 747 aaPredicted RBP27.18■■□□□ 1.94
TMEM260-214ENST00000556975 PLXNB2O15031 1838 aa27.18■■□□□ 1.94
TMEM260-214ENST00000556975 CNMDO75829 334 aa27.17■■□□□ 1.94
TMEM260-214ENST00000556975 CAPN2P17655 700 aa27.17■■□□□ 1.94
TMEM260-214ENST00000556975 PAGR1Q9BTK6 254 aa27.17■■□□□ 1.94
TMEM260-214ENST00000556975 ARHGEF10LQ9HCE6 1279 aa27.17■■□□□ 1.94
TMEM260-214ENST00000556975 TMX2Q9Y320 296 aa27.17■■□□□ 1.94
TMEM260-214ENST00000556975 ICA1Q05084 483 aa27.16■■□□□ 1.94
TMEM260-214ENST00000556975 SOCS4Q8WXH5 440 aa27.16■■□□□ 1.94
TMEM260-214ENST00000556975 LPAR1Q92633 364 aa27.16■■□□□ 1.94
TMEM260-214ENST00000556975 NUDT12Q9BQG2 462 aa27.16■■□□□ 1.94
TMEM260-214ENST00000556975 PORCNQ9H237 461 aa27.16■■□□□ 1.94
TMEM260-214ENST00000556975 STAP2Q9UGK3 403 aa27.16■■□□□ 1.94
TMEM260-214ENST00000556975 M0R2C6 588 aa27.15■■□□□ 1.94
TMEM260-214ENST00000556975 SGPL1O95470 568 aa27.15■■□□□ 1.94
TMEM260-214ENST00000556975 XRCC5P13010 732 aaKnown RBP27.15■■□□□ 1.94
TMEM260-214ENST00000556975 COG2Q14746 738 aa27.15■■□□□ 1.94
TMEM260-214ENST00000556975 SH2D4AQ9H788 454 aa27.15■■□□□ 1.94
TMEM260-214ENST00000556975 HOXC10Q9NYD6 342 aa27.15■■□□□ 1.94
TMEM260-214ENST00000556975 SPDYE16A6NNV3 312 aaPredicted RBP27.14■■□□□ 1.94
TMEM260-214ENST00000556975 PATL2C9JE40 543 aaKnown RBP27.14■■□□□ 1.94
TMEM260-214ENST00000556975 HMGCRP04035 888 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms