RNA–Protein interactions for RNA: ENST00000556849.2

PCNX1-214, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-214ENST00000556849 SCAND2PQ9GZW5 306 aaPredicted RBP6.14□□□□□ -1.43
PCNX1-214ENST00000556849 SH2B1Q9NRF2 756 aaPredicted RBP6.14□□□□□ -1.43
PCNX1-214ENST00000556849 TOMM22Q9NS69 142 aa6.14□□□□□ -1.43
PCNX1-214ENST00000556849 GNL3LQ9NVN8 582 aaKnown RBP6.14□□□□□ -1.43
PCNX1-214ENST00000556849 KLK14Q9P0G3 267 aa6.14□□□□□ -1.43
PCNX1-214ENST00000556849 MAGEC2Q9UBF1 373 aaPredicted RBP6.14□□□□□ -1.43
PCNX1-214ENST00000556849 HRH3Q9Y5N1 445 aa6.14□□□□□ -1.43
PCNX1-214ENST00000556849 TTC21AQ8NDW8 1320 aa6.14□□□□□ -1.43
PCNX1-214ENST00000556849 TRPM2O94759 1503 aa6.14□□□□□ -1.43
PCNX1-214ENST00000556849 USP27XA6NNY8 438 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 A6NNZ2 444 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 GOLGA6L19H0YKK7 550 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 KLF4O43474 513 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 VAMP4O75379 141 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 TNFRSF21O75509 655 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 IL2RAP01589 272 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 HSPA4P34932 840 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 KRT85P78386 507 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 ICA1Q05084 483 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 APOBRQ0VD83 1088 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 NEDD9Q14511 834 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 CRYMQ14894 314 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 SART3Q15020 963 aaKnown RBP6.13□□□□□ -1.43
PCNX1-214ENST00000556849 TUBB8Q3ZCM7 444 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 MAP9Q49MG5 647 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 E4F1Q66K89 784 aaPredicted RBP6.13□□□□□ -1.43
PCNX1-214ENST00000556849 PDE12Q6L8Q7 609 aaKnown RBP6.13□□□□□ -1.43
PCNX1-214ENST00000556849 ANKS3Q6ZW76 656 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 HDXQ7Z353 690 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 NBPF5PQ86XG9 351 aaPredicted RBP6.13□□□□□ -1.43
PCNX1-214ENST00000556849 SPATS2Q86XZ4 545 aaKnown RBP6.13□□□□□ -1.43
PCNX1-214ENST00000556849 RELL1Q8IUW5 271 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 RNF217Q8TC41 542 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 EPS8L3Q8TE67 593 aaKnown RBP6.13□□□□□ -1.43
PCNX1-214ENST00000556849 ZDHHC1Q8WTX9 485 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 TSR2Q969E8 191 aaKnown RBP6.13□□□□□ -1.43
PCNX1-214ENST00000556849 ITFG2Q969R8 447 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 MIEF2Q96C03 454 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 SGSM3Q96HU1 749 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 PPP1R13BQ96KQ4 1090 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 TTC14Q96N46 770 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 BPIFA3Q9BQP9 254 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 PHACTR1Q9C0D0 580 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 GBP3Q9H0R5 595 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 TNMDQ9H2S6 317 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 VIPAS39Q9H9C1 493 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 ARHGEF10LQ9HCE6 1279 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 TYW1Q9NV66 732 aaKnown RBP6.13□□□□□ -1.43
PCNX1-214ENST00000556849 KBTBD4Q9NVX7 518 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 PGPEP1Q9NXJ5 209 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 CABP1Q9NZU7 370 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.13□□□□□ -1.43
PCNX1-214ENST00000556849 RAB21Q9UL25 225 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 LIMCH1Q9UPQ0 1083 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 SMC3Q9UQE7 1217 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 MTMR6Q9Y217 621 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 HCN4Q9Y3Q4 1203 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 RIPOR2Q9Y4F9 1068 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 SALL3Q9BXA9 1300 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 KIAA0232Q92628 1395 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 NSD3Q9BZ95 1437 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 ATP10DQ9P241 1426 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 NRXN1Q9ULB1 1477 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 ADAMTS12P58397 1594 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 CDC42BPGQ6DT37 1551 aa6.13□□□□□ -1.43
PCNX1-214ENST00000556849 MYO1BO43795 1136 aa6.12□□□□□ -1.43
PCNX1-214ENST00000556849 ERLIN1O75477 346 aa6.12□□□□□ -1.43
PCNX1-214ENST00000556849 ERLIN2O94905 339 aa6.12□□□□□ -1.43
PCNX1-214ENST00000556849 PARNO95453 639 aaKnown RBP6.12□□□□□ -1.43
PCNX1-214ENST00000556849 S1PR4O95977 384 aa6.12□□□□□ -1.43
PCNX1-214ENST00000556849 COL3A1P02461 1466 aaPredicted RBP6.12□□□□□ -1.43
PCNX1-214ENST00000556849 PDCP20941 246 aa6.12□□□□□ -1.43
PCNX1-214ENST00000556849 GSTT1P30711 240 aa6.12□□□□□ -1.43
PCNX1-214ENST00000556849 HNRNPH1P31943 449 aaKnown RBP6.12□□□□□ -1.43
PCNX1-214ENST00000556849 GRM5P41594 1212 aa6.12□□□□□ -1.43
PCNX1-214ENST00000556849 SOX9P48436 509 aa6.12□□□□□ -1.43
PCNX1-214ENST00000556849 MTHFSP49914 203 aa6.12□□□□□ -1.43
PCNX1-214ENST00000556849 MRPL12P52815 198 aaKnown RBP6.12□□□□□ -1.43
PCNX1-214ENST00000556849 EVCP57679 992 aa6.12□□□□□ -1.43
PCNX1-214ENST00000556849 TRIM32Q13049 653 aa6.12□□□□□ -1.43
PCNX1-214ENST00000556849 NR5A1Q13285 461 aa6.12□□□□□ -1.43
PCNX1-214ENST00000556849 ARID5BQ14865 1188 aa6.12□□□□□ -1.43
PCNX1-214ENST00000556849 PPP1R26Q5T8A7 1209 aaPredicted RBP6.12□□□□□ -1.43
PCNX1-214ENST00000556849 LRRC31Q6UY01 552 aa6.12□□□□□ -1.43
PCNX1-214ENST00000556849 EP400NLQ6ZTU2 488 aa6.12□□□□□ -1.43
PCNX1-214ENST00000556849 SAMD9LQ8IVG5 1584 aa6.12□□□□□ -1.43
PCNX1-214ENST00000556849 ZNF295-AS1Q8N0V1 137 aa6.12□□□□□ -1.43
PCNX1-214ENST00000556849 MSANTD4Q8NCY6 345 aa6.12□□□□□ -1.43
PCNX1-214ENST00000556849 BICD2Q8TD16 824 aa6.12□□□□□ -1.43
PCNX1-214ENST00000556849 MAGEC3Q8TD91 643 aa6.12□□□□□ -1.43
PCNX1-214ENST00000556849 DEPDC7Q96QD5 511 aa6.12□□□□□ -1.43
PCNX1-214ENST00000556849 PRAM1Q96QH2 718 aa6.12□□□□□ -1.43
PCNX1-214ENST00000556849 THUMPD2Q9BTF0 503 aaKnown RBP6.12□□□□□ -1.43
PCNX1-214ENST00000556849 TM6SF1Q9BZW5 370 aa6.12□□□□□ -1.43
PCNX1-214ENST00000556849 ZFYVE28Q9HCC9 887 aa6.12□□□□□ -1.43
PCNX1-214ENST00000556849 COPRSQ9NQ92 184 aa6.12□□□□□ -1.43
PCNX1-214ENST00000556849 RAB6BQ9NRW1 208 aa6.12□□□□□ -1.43
PCNX1-214ENST00000556849 SNTG2Q9NY99 539 aa6.12□□□□□ -1.43
PCNX1-214ENST00000556849 TERF2IPQ9NYB0 399 aa6.12□□□□□ -1.43
PCNX1-214ENST00000556849 STAP2Q9UGK3 403 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 945.1 ms