RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 BAZ2AQ9UIF9 1905 aaKnown RBP17.98■□□□□ 0.47
CHD8-211ENST00000556833 RGS2P41220 211 aa17.98■□□□□ 0.47
CHD8-211ENST00000556833 MAP3K12Q12852 859 aa17.98■□□□□ 0.47
CHD8-211ENST00000556833 MAP3K21Q5TCX8 1036 aa17.98■□□□□ 0.47
CHD8-211ENST00000556833 MIER1Q8N108 512 aa17.98■□□□□ 0.47
CHD8-211ENST00000556833 ANKLE1Q8NAG6 615 aa17.98■□□□□ 0.47
CHD8-211ENST00000556833 DNAJC2Q99543 621 aaKnown RBP17.98■□□□□ 0.47
CHD8-211ENST00000556833 MAGEB6P1A0A0J9YX57 407 aa17.97■□□□□ 0.47
CHD8-211ENST00000556833 MPHOSPH10O00566 681 aaKnown RBP17.97■□□□□ 0.47
CHD8-211ENST00000556833 POLR3DP05423 398 aaPredicted RBP17.97■□□□□ 0.47
CHD8-211ENST00000556833 VCAM1P19320 739 aa17.97■□□□□ 0.47
CHD8-211ENST00000556833 SHMT1P34896 483 aa17.97■□□□□ 0.47
CHD8-211ENST00000556833 MORN1Q5T089 497 aa17.97■□□□□ 0.47
CHD8-211ENST00000556833 TATDN1Q6P1N9 297 aa17.97■□□□□ 0.47
CHD8-211ENST00000556833 EDC3Q96F86 508 aaKnown RBP17.97■□□□□ 0.47
CHD8-211ENST00000556833 APBA2Q99767 749 aa17.97■□□□□ 0.47
CHD8-211ENST00000556833 GINM1Q9NU53 330 aa17.97■□□□□ 0.47
CHD8-211ENST00000556833 OGDHLQ9ULD0 1010 aa17.97■□□□□ 0.47
CHD8-211ENST00000556833 USP17L15C9J2P7 530 aa17.96■□□□□ 0.47
CHD8-211ENST00000556833 USP17L13C9JLJ4 530 aa17.96■□□□□ 0.47
CHD8-211ENST00000556833 USP17L11C9JVI0 530 aa17.96■□□□□ 0.47
CHD8-211ENST00000556833 USP17L18D6R9N7 530 aa17.96■□□□□ 0.47
CHD8-211ENST00000556833 USP17L22D6RA61 530 aa17.96■□□□□ 0.47
CHD8-211ENST00000556833 USP17L17D6RBQ6 530 aa17.96■□□□□ 0.47
CHD8-211ENST00000556833 USP17L19D6RCP7 530 aa17.96■□□□□ 0.47
CHD8-211ENST00000556833 USP17L20D6RJB6 530 aa17.96■□□□□ 0.47
CHD8-211ENST00000556833 CYP2D6P10635 497 aa17.96■□□□□ 0.47
CHD8-211ENST00000556833 MAGEA10P43363 369 aaPredicted RBP17.96■□□□□ 0.47
CHD8-211ENST00000556833 USP17L24Q0WX57 530 aa17.96■□□□□ 0.47
CHD8-211ENST00000556833 SEPT2Q15019 361 aa17.96■□□□□ 0.47
CHD8-211ENST00000556833 SLFNL1Q499Z3 407 aa17.96■□□□□ 0.47
CHD8-211ENST00000556833 SAMD1Q6SPF0 538 aaPredicted RBP17.96■□□□□ 0.47
CHD8-211ENST00000556833 SDR42E1Q8WUS8 393 aa17.96■□□□□ 0.47
CHD8-211ENST00000556833 USP6NLQ92738 828 aa17.96■□□□□ 0.47
CHD8-211ENST00000556833 RIOK1Q9BRS2 568 aaKnown RBP17.96■□□□□ 0.47
CHD8-211ENST00000556833 RPAP3Q9H6T3 665 aaPredicted RBP17.96■□□□□ 0.47
CHD8-211ENST00000556833 FLRT1Q9NZU1 646 aa17.96■□□□□ 0.47
CHD8-211ENST00000556833 BTBD7Q9P203 1132 aa17.96■□□□□ 0.47
CHD8-211ENST00000556833 GOLIM4O00461 696 aa17.95■□□□□ 0.46
CHD8-211ENST00000556833 XRCC5P13010 732 aaKnown RBP17.95■□□□□ 0.46
CHD8-211ENST00000556833 PDE6AP16499 860 aa17.95■□□□□ 0.46
CHD8-211ENST00000556833 GUCY1A2P33402 732 aa17.95■□□□□ 0.46
CHD8-211ENST00000556833 TTC6Q86TZ1 520 aa17.95■□□□□ 0.46
CHD8-211ENST00000556833 CLEC10AQ8IUN9 316 aa17.95■□□□□ 0.46
CHD8-211ENST00000556833 SLC44A5Q8NCS7 719 aa17.95■□□□□ 0.46
CHD8-211ENST00000556833 GDF15Q99988 308 aa17.95■□□□□ 0.46
CHD8-211ENST00000556833 EHD4Q9H223 541 aa17.95■□□□□ 0.46
CHD8-211ENST00000556833 CABP5Q9NP86 173 aa17.95■□□□□ 0.46
CHD8-211ENST00000556833 MCM9Q9NXL9 1143 aa17.95■□□□□ 0.46
CHD8-211ENST00000556833 COL6A3P12111 3177 aa17.95■□□□□ 0.46
CHD8-211ENST00000556833 DNAH12Q6ZR08 3092 aa17.95■□□□□ 0.46
CHD8-211ENST00000556833 CNGA1P29973 690 aa17.94■□□□□ 0.46
CHD8-211ENST00000556833 MAP2K5Q13163 448 aa17.94■□□□□ 0.46
CHD8-211ENST00000556833 LRRC26Q2I0M4 334 aa17.94■□□□□ 0.46
CHD8-211ENST00000556833 SLC9C2Q5TAH2 1124 aa17.94■□□□□ 0.46
CHD8-211ENST00000556833 CATSPERGQ6ZRH7 1159 aa17.94■□□□□ 0.46
CHD8-211ENST00000556833 Q7L0L9 218 aa17.94■□□□□ 0.46
CHD8-211ENST00000556833 ERC1Q8IUD2 1116 aa17.94■□□□□ 0.46
CHD8-211ENST00000556833 RHPN1Q8TCX5 695 aa17.94■□□□□ 0.46
CHD8-211ENST00000556833 GTF3C2Q8WUA4 911 aaPredicted RBP17.94■□□□□ 0.46
CHD8-211ENST00000556833 C12orf42Q96LP6 360 aa17.94■□□□□ 0.46
CHD8-211ENST00000556833 RABGAP1Q9Y3P9 1069 aa17.94■□□□□ 0.46
CHD8-211ENST00000556833 ZNF532Q9HCE3 1301 aa17.94■□□□□ 0.46
CHD8-211ENST00000556833 SPDYE16A6NNV3 312 aaPredicted RBP17.93■□□□□ 0.46
CHD8-211ENST00000556833 CAPN2P17655 700 aa17.93■□□□□ 0.46
CHD8-211ENST00000556833 USP14P54578 494 aa17.93■□□□□ 0.46
CHD8-211ENST00000556833 CCNA1P78396 465 aa17.93■□□□□ 0.46
CHD8-211ENST00000556833 LHX8Q68G74 356 aa17.93■□□□□ 0.46
CHD8-211ENST00000556833 LCORLQ8N3X6 602 aa17.93■□□□□ 0.46
CHD8-211ENST00000556833 CRNKL1Q9BZJ0 848 aaKnown RBP17.93■□□□□ 0.46
CHD8-211ENST00000556833 TANGO6Q9C0B7 1094 aa17.93■□□□□ 0.46
CHD8-211ENST00000556833 KIAA1683Q9H0B3 1180 aa17.93■□□□□ 0.46
CHD8-211ENST00000556833 MYH7P12883 1935 aa17.92■□□□□ 0.46
CHD8-211ENST00000556833 A0A1W2PPC1 479 aa17.92■□□□□ 0.46
CHD8-211ENST00000556833 A0A1W2PRG0 241 aa17.92■□□□□ 0.46
CHD8-211ENST00000556833 CYP2C19P33261 490 aa17.92■□□□□ 0.46
CHD8-211ENST00000556833 MDM2Q00987 491 aaPredicted RBP17.92■□□□□ 0.46
CHD8-211ENST00000556833 TRMT44Q8IYL2 757 aaKnown RBP17.92■□□□□ 0.46
CHD8-211ENST00000556833 NPLOC4Q8TAT6 608 aa17.92■□□□□ 0.46
CHD8-211ENST00000556833 DYNLL2Q96FJ2 89 aa17.92■□□□□ 0.46
CHD8-211ENST00000556833 UBE2OQ9C0C9 1292 aaKnown RBP17.92■□□□□ 0.46
CHD8-211ENST00000556833 ARMT1Q9H993 441 aa17.92■□□□□ 0.46
CHD8-211ENST00000556833 IVNS1ABPQ9Y6Y0 642 aa17.92■□□□□ 0.46
CHD8-211ENST00000556833 RLFQ13129 1914 aa17.92■□□□□ 0.46
CHD8-211ENST00000556833 COL11A1P12107 1806 aaPredicted RBP17.91■□□□□ 0.46
CHD8-211ENST00000556833 SMIM22K7EJ46 135 aa17.91■□□□□ 0.46
CHD8-211ENST00000556833 MYCNP04198 464 aaPredicted RBP17.91■□□□□ 0.46
CHD8-211ENST00000556833 CHGBP05060 677 aa17.91■□□□□ 0.46
CHD8-211ENST00000556833 PTPREP23469 700 aa17.91■□□□□ 0.46
CHD8-211ENST00000556833 ATN1P54259 1190 aaPredicted RBP17.91■□□□□ 0.46
CHD8-211ENST00000556833 ATP2B2Q01814 1243 aa17.91■□□□□ 0.46
CHD8-211ENST00000556833 KIAA1755Q5JYT7 1200 aa17.91■□□□□ 0.46
CHD8-211ENST00000556833 MFSD14CQ5VZR4 134 aa17.91■□□□□ 0.46
CHD8-211ENST00000556833 ANO1Q5XXA6 986 aa17.91■□□□□ 0.46
CHD8-211ENST00000556833 CERS3Q8IU89 383 aa17.91■□□□□ 0.46
CHD8-211ENST00000556833 SLC17A8Q8NDX2 589 aa17.91■□□□□ 0.46
CHD8-211ENST00000556833 A0A0G2JMZ2 1700 aa17.9■□□□□ 0.46
CHD8-211ENST00000556833 CYP2D7A0A087X1C5 515 aa17.9■□□□□ 0.46
CHD8-211ENST00000556833 PRKAB2O43741 272 aa17.9■□□□□ 0.46
CHD8-211ENST00000556833 GLRX3O76003 335 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms