RNA–Protein interactions for RNA: ENST00000556742.1

IFT43-212, Transcript of intraflagellar transport 43, humanhuman

TSL 2 BASIC

Gene IFT43, Length 848 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-212ENST00000556742 TREML2Q5T2D2 321 aa12.84□□□□□ -0.35
IFT43-212ENST00000556742 USP17L2Q6R6M4 530 aa12.84□□□□□ -0.35
IFT43-212ENST00000556742 IFNL3Q8IZI9 196 aa12.84□□□□□ -0.35
IFT43-212ENST00000556742 SLC44A5Q8NCS7 719 aa12.84□□□□□ -0.35
IFT43-212ENST00000556742 DYNLL2Q96FJ2 89 aa12.84□□□□□ -0.35
IFT43-212ENST00000556742 KIAA1683Q9H0B3 1180 aa12.84□□□□□ -0.35
IFT43-212ENST00000556742 EFCC1Q9HA90 598 aa12.84□□□□□ -0.35
IFT43-212ENST00000556742 EPB41L4AQ9HCS5 686 aaPredicted RBP12.84□□□□□ -0.35
IFT43-212ENST00000556742 A0A0G2JMZ2 1700 aa12.83□□□□□ -0.36
IFT43-212ENST00000556742 APPP05067 770 aa12.83□□□□□ -0.36
IFT43-212ENST00000556742 OSBPP22059 807 aa12.83□□□□□ -0.36
IFT43-212ENST00000556742 USP14P54578 494 aa12.83□□□□□ -0.36
IFT43-212ENST00000556742 SMCR8Q8TEV9 937 aaPredicted RBP12.83□□□□□ -0.36
IFT43-212ENST00000556742 RILPL2Q969X0 211 aa12.83□□□□□ -0.36
IFT43-212ENST00000556742 ZNF287Q9HBT7 754 aa12.83□□□□□ -0.36
IFT43-212ENST00000556742 CPA4Q9UI42 421 aa12.83□□□□□ -0.36
IFT43-212ENST00000556742 TRIM17Q9Y577 477 aa12.83□□□□□ -0.36
IFT43-212ENST00000556742 BRCA2P51587 3418 aa12.82□□□□□ -0.36
IFT43-212ENST00000556742 MPHOSPH10O00566 681 aaKnown RBP12.82□□□□□ -0.36
IFT43-212ENST00000556742 GCLCP48506 637 aaPredicted RBP12.82□□□□□ -0.36
IFT43-212ENST00000556742 SEPT2Q15019 361 aa12.82□□□□□ -0.36
IFT43-212ENST00000556742 MCMDC2Q4G0Z9 681 aa12.82□□□□□ -0.36
IFT43-212ENST00000556742 FEZ1Q99689 392 aa12.82□□□□□ -0.36
IFT43-212ENST00000556742 NAPBQ9H115 298 aa12.82□□□□□ -0.36
IFT43-212ENST00000556742 ASCC2Q9H1I8 757 aaPredicted RBP12.82□□□□□ -0.36
IFT43-212ENST00000556742 EMILIN3Q9NT22 766 aa12.82□□□□□ -0.36
IFT43-212ENST00000556742 COL11A1P12107 1806 aaPredicted RBP12.82□□□□□ -0.36
IFT43-212ENST00000556742 PLXNB2O15031 1838 aa12.81□□□□□ -0.36
IFT43-212ENST00000556742 A0A0D9SFI3 127 aa12.81□□□□□ -0.36
IFT43-212ENST00000556742 MINDY4BA8MYZ0 360 aa12.81□□□□□ -0.36
IFT43-212ENST00000556742 SMIM22K7EJ46 135 aa12.81□□□□□ -0.36
IFT43-212ENST00000556742 HIP1O00291 1037 aa12.81□□□□□ -0.36
IFT43-212ENST00000556742 FOXP2O15409 715 aa12.81□□□□□ -0.36
IFT43-212ENST00000556742 AKR1B1P15121 316 aa12.81□□□□□ -0.36
IFT43-212ENST00000556742 PDE4AP27815 886 aa12.81□□□□□ -0.36
IFT43-212ENST00000556742 MFAP1P55081 439 aaKnown RBP12.81□□□□□ -0.36
IFT43-212ENST00000556742 PRMT2P55345 433 aa12.81□□□□□ -0.36
IFT43-212ENST00000556742 CAP1Q01518 475 aa12.81□□□□□ -0.36
IFT43-212ENST00000556742 ALX1Q15699 326 aa12.81□□□□□ -0.36
IFT43-212ENST00000556742 FAM110CQ1W6H9 321 aa12.81□□□□□ -0.36
IFT43-212ENST00000556742 ACER1Q8TDN7 264 aa12.81□□□□□ -0.36
IFT43-212ENST00000556742 SH2D4AQ9H788 454 aa12.81□□□□□ -0.36
IFT43-212ENST00000556742 HPS5Q9UPZ3 1129 aa12.81□□□□□ -0.36
IFT43-212ENST00000556742 PTPN22Q9Y2R2 807 aa12.81□□□□□ -0.36
IFT43-212ENST00000556742 ZMYM6O95789 1325 aa12.81□□□□□ -0.36
IFT43-212ENST00000556742 SLC3A2P08195 630 aaKnown RBP12.8□□□□□ -0.36
IFT43-212ENST00000556742 SDSP20132 328 aa12.8□□□□□ -0.36
IFT43-212ENST00000556742 RASA1P20936 1047 aa12.8□□□□□ -0.36
IFT43-212ENST00000556742 IRX3P78415 501 aaPredicted RBP12.8□□□□□ -0.36
IFT43-212ENST00000556742 NMIQ13287 307 aaPredicted RBP12.8□□□□□ -0.36
IFT43-212ENST00000556742 CCDC129Q6ZRS4 1044 aa12.8□□□□□ -0.36
IFT43-212ENST00000556742 GTF3C2Q8WUA4 911 aaPredicted RBP12.8□□□□□ -0.36
IFT43-212ENST00000556742 FAM227BQ96M60 508 aa12.8□□□□□ -0.36
IFT43-212ENST00000556742 KANSL2Q9H9L4 492 aa12.8□□□□□ -0.36
IFT43-212ENST00000556742 MKNK2Q9HBH9 465 aa12.8□□□□□ -0.36
IFT43-212ENST00000556742 ARHGEF10LQ9HCE6 1279 aa12.8□□□□□ -0.36
IFT43-212ENST00000556742 TMX2Q9Y320 296 aa12.8□□□□□ -0.36
IFT43-212ENST00000556742 A0A1W2PRG0 241 aa12.79□□□□□ -0.36
IFT43-212ENST00000556742 USP17L15C9J2P7 530 aa12.79□□□□□ -0.36
IFT43-212ENST00000556742 USP17L13C9JLJ4 530 aa12.79□□□□□ -0.36
IFT43-212ENST00000556742 USP17L11C9JVI0 530 aa12.79□□□□□ -0.36
IFT43-212ENST00000556742 USP17L18D6R9N7 530 aa12.79□□□□□ -0.36
IFT43-212ENST00000556742 USP17L22D6RA61 530 aa12.79□□□□□ -0.36
IFT43-212ENST00000556742 USP17L17D6RBQ6 530 aa12.79□□□□□ -0.36
IFT43-212ENST00000556742 USP17L19D6RCP7 530 aa12.79□□□□□ -0.36
IFT43-212ENST00000556742 USP17L20D6RJB6 530 aa12.79□□□□□ -0.36
IFT43-212ENST00000556742 VCAM1P19320 739 aa12.79□□□□□ -0.36
IFT43-212ENST00000556742 PSMC4P43686 418 aa12.79□□□□□ -0.36
IFT43-212ENST00000556742 HERVK_113P62684 666 aa12.79□□□□□ -0.36
IFT43-212ENST00000556742 ICA1Q05084 483 aa12.79□□□□□ -0.36
IFT43-212ENST00000556742 PDE4BQ07343 736 aa12.79□□□□□ -0.36
IFT43-212ENST00000556742 PPARAQ07869 468 aa12.79□□□□□ -0.36
IFT43-212ENST00000556742 USP17L24Q0WX57 530 aa12.79□□□□□ -0.36
IFT43-212ENST00000556742 TTC22Q5TAA0 569 aa12.79□□□□□ -0.36
IFT43-212ENST00000556742 LPAR1Q92633 364 aa12.79□□□□□ -0.36
IFT43-212ENST00000556742 TRIM47Q96LD4 638 aa12.79□□□□□ -0.36
IFT43-212ENST00000556742 ARHGAP39Q9C0H5 1083 aa12.79□□□□□ -0.36
IFT43-212ENST00000556742 MORF4L1Q9UBU8 362 aa12.79□□□□□ -0.36
IFT43-212ENST00000556742 ANAPC4Q9UJX5 808 aa12.79□□□□□ -0.36
IFT43-212ENST00000556742 CCDC171Q6TFL3 1326 aa12.79□□□□□ -0.36
IFT43-212ENST00000556742 PLIN4Q96Q06 1357 aa12.79□□□□□ -0.36
IFT43-212ENST00000556742 ZNFX1Q9P2E3 1918 aaKnown RBP12.78□□□□□ -0.36
IFT43-212ENST00000556742 CCDC85CA6NKD9 419 aa12.78□□□□□ -0.36
IFT43-212ENST00000556742 CAPN15O75808 1086 aa12.78□□□□□ -0.36
IFT43-212ENST00000556742 HSPD1P10809 573 aaKnown RBP12.78□□□□□ -0.36
IFT43-212ENST00000556742 HOXD10P28358 340 aa12.78□□□□□ -0.36
IFT43-212ENST00000556742 CTGFP29279 349 aa12.78□□□□□ -0.36
IFT43-212ENST00000556742 FCGRTP55899 365 aa12.78□□□□□ -0.36
IFT43-212ENST00000556742 ZYXQ15942 572 aaKnown RBP12.78□□□□□ -0.36
IFT43-212ENST00000556742 VPS53Q5VIR6 699 aa12.78□□□□□ -0.36
IFT43-212ENST00000556742 LBX2Q6XYB7 198 aa12.78□□□□□ -0.36
IFT43-212ENST00000556742 CATSPERGQ6ZRH7 1159 aa12.78□□□□□ -0.36
IFT43-212ENST00000556742 CENPQQ7L2Z9 268 aaPredicted RBP12.78□□□□□ -0.36
IFT43-212ENST00000556742 SIAH1Q8IUQ4 282 aa12.78□□□□□ -0.36
IFT43-212ENST00000556742 ZNF444Q8N0Y2 327 aaPredicted RBP12.78□□□□□ -0.36
IFT43-212ENST00000556742 ANKRD13CQ8N6S4 541 aa12.78□□□□□ -0.36
IFT43-212ENST00000556742 P2RX7Q99572 595 aaKnown RBP12.78□□□□□ -0.36
IFT43-212ENST00000556742 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.78□□□□□ -0.36
IFT43-212ENST00000556742 DIAPH3Q9NSV4 1193 aa12.78□□□□□ -0.36
IFT43-212ENST00000556742 KIAA0100Q14667 2235 aaKnown RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms