RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 USP17L12C9JPN9 530 aa12.42□□□□□ -0.42
SHMT2-224ENST00000556737 USP17L21D6R901 530 aa12.42□□□□□ -0.42
SHMT2-224ENST00000556737 ERC2O15083 957 aa12.42□□□□□ -0.42
SHMT2-224ENST00000556737 GPAA1O43292 621 aa12.42□□□□□ -0.42
SHMT2-224ENST00000556737 FMNL1O95466 1100 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-224ENST00000556737 ZFYP08048 801 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-224ENST00000556737 GCLCP48506 637 aaPredicted RBP12.42□□□□□ -0.42
SHMT2-224ENST00000556737 SEPT2Q15019 361 aa12.42□□□□□ -0.42
SHMT2-224ENST00000556737 RAB3GAP1Q15042 981 aa12.42□□□□□ -0.42
SHMT2-224ENST00000556737 ANKRD45Q5TZF3 282 aa12.42□□□□□ -0.42
SHMT2-224ENST00000556737 CTR9Q6PD62 1173 aa12.42□□□□□ -0.42
SHMT2-224ENST00000556737 USP17L2Q6R6M4 530 aa12.42□□□□□ -0.42
SHMT2-224ENST00000556737 C16orf86Q6ZW13 317 aa12.42□□□□□ -0.42
SHMT2-224ENST00000556737 SMC5Q8IY18 1101 aa12.42□□□□□ -0.42
SHMT2-224ENST00000556737 STAP2Q9UGK3 403 aa12.42□□□□□ -0.42
SHMT2-224ENST00000556737 GABRQQ9UN88 632 aa12.42□□□□□ -0.42
SHMT2-224ENST00000556737 A0A1W2PRG0 241 aa12.41□□□□□ -0.42
SHMT2-224ENST00000556737 AKR1B1P15121 316 aa12.41□□□□□ -0.42
SHMT2-224ENST00000556737 VCAM1P19320 739 aa12.41□□□□□ -0.42
SHMT2-224ENST00000556737 HERVK_113P62684 666 aa12.41□□□□□ -0.42
SHMT2-224ENST00000556737 IRX3P78415 501 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-224ENST00000556737 ZYXQ15942 572 aaKnown RBP12.41□□□□□ -0.42
SHMT2-224ENST00000556737 CLEC10AQ8IUN9 316 aa12.41□□□□□ -0.42
SHMT2-224ENST00000556737 P2RX7Q99572 595 aaKnown RBP12.41□□□□□ -0.42
SHMT2-224ENST00000556737 FEZ1Q99689 392 aa12.41□□□□□ -0.42
SHMT2-224ENST00000556737 TXNRD2Q9NNW7 524 aa12.41□□□□□ -0.42
SHMT2-224ENST00000556737 ARPP21Q9UBL0 812 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-224ENST00000556737 DOCK3Q8IZD9 2030 aa12.4□□□□□ -0.42
SHMT2-224ENST00000556737 TNPO2O14787 897 aaKnown RBP12.4□□□□□ -0.42
SHMT2-224ENST00000556737 FOXP2O15409 715 aa12.4□□□□□ -0.42
SHMT2-224ENST00000556737 PEX10O60683 326 aa12.4□□□□□ -0.42
SHMT2-224ENST00000556737 IGHDP01880 384 aa12.4□□□□□ -0.42
SHMT2-224ENST00000556737 CDK8P49336 464 aa12.4□□□□□ -0.42
SHMT2-224ENST00000556737 PDE1AP54750 535 aa12.4□□□□□ -0.42
SHMT2-224ENST00000556737 SBK1Q52WX2 424 aa12.4□□□□□ -0.42
SHMT2-224ENST00000556737 ZMYM1Q5SVZ6 1142 aa12.4□□□□□ -0.42
SHMT2-224ENST00000556737 GIMAP6Q6P9H5 292 aa12.4□□□□□ -0.42
SHMT2-224ENST00000556737 TMEM179Q6ZVK1 233 aa12.4□□□□□ -0.42
SHMT2-224ENST00000556737 SIAH1Q8IUQ4 282 aa12.4□□□□□ -0.42
SHMT2-224ENST00000556737 SEC62Q99442 399 aaKnown RBP12.4□□□□□ -0.42
SHMT2-224ENST00000556737 FSD1Q9BTV5 496 aa12.4□□□□□ -0.42
SHMT2-224ENST00000556737 CABP5Q9NP86 173 aa12.4□□□□□ -0.42
SHMT2-224ENST00000556737 MPHOSPH10O00566 681 aaKnown RBP12.39□□□□□ -0.43
SHMT2-224ENST00000556737 HOXD10P28358 340 aa12.39□□□□□ -0.43
SHMT2-224ENST00000556737 GRK4P32298 578 aa12.39□□□□□ -0.43
SHMT2-224ENST00000556737 FLT3LGP49771 235 aa12.39□□□□□ -0.43
SHMT2-224ENST00000556737 USP14P54578 494 aa12.39□□□□□ -0.43
SHMT2-224ENST00000556737 RAET1EQ8TD07 263 aa12.39□□□□□ -0.43
SHMT2-224ENST00000556737 RBPJLQ9UBG7 517 aa12.39□□□□□ -0.43
SHMT2-224ENST00000556737 ZNF236Q9UL36 1845 aa12.39□□□□□ -0.43
SHMT2-224ENST00000556737 CNMDO75829 334 aa12.38□□□□□ -0.43
SHMT2-224ENST00000556737 ICA1Q05084 483 aa12.38□□□□□ -0.43
SHMT2-224ENST00000556737 IRF5Q13568 498 aa12.38□□□□□ -0.43
SHMT2-224ENST00000556737 MTFR1Q15390 333 aa12.38□□□□□ -0.43
SHMT2-224ENST00000556737 KIAA1755Q5JYT7 1200 aa12.38□□□□□ -0.43
SHMT2-224ENST00000556737 NBPF11Q86T75 865 aa12.38□□□□□ -0.43
SHMT2-224ENST00000556737 SLAIN1Q8ND83 568 aa12.38□□□□□ -0.43
SHMT2-224ENST00000556737 DDRGK1Q96HY6 314 aa12.38□□□□□ -0.43
SHMT2-224ENST00000556737 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.38□□□□□ -0.435e-8■■■□□ 18.8
SHMT2-224ENST00000556737 LNPKQ9C0E8 428 aa12.38□□□□□ -0.43
SHMT2-224ENST00000556737 RPAP3Q9H6T3 665 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-224ENST00000556737 KIAA0100Q14667 2235 aaKnown RBP12.38□□□□□ -0.43
SHMT2-224ENST00000556737 SPDYE16A6NNV3 312 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-224ENST00000556737 USP17L15C9J2P7 530 aa12.37□□□□□ -0.43
SHMT2-224ENST00000556737 USP17L13C9JLJ4 530 aa12.37□□□□□ -0.43
SHMT2-224ENST00000556737 USP17L11C9JVI0 530 aa12.37□□□□□ -0.43
SHMT2-224ENST00000556737 USP17L18D6R9N7 530 aa12.37□□□□□ -0.43
SHMT2-224ENST00000556737 USP17L22D6RA61 530 aa12.37□□□□□ -0.43
SHMT2-224ENST00000556737 USP17L17D6RBQ6 530 aa12.37□□□□□ -0.43
SHMT2-224ENST00000556737 USP17L19D6RCP7 530 aa12.37□□□□□ -0.43
SHMT2-224ENST00000556737 USP17L20D6RJB6 530 aa12.37□□□□□ -0.43
SHMT2-224ENST00000556737 GNAT2P19087 354 aa12.37□□□□□ -0.43
SHMT2-224ENST00000556737 EN2P19622 333 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-224ENST00000556737 RASA1P20936 1047 aa12.37□□□□□ -0.43
SHMT2-224ENST00000556737 ERVK-9P63128 1117 aa12.37□□□□□ -0.43
SHMT2-224ENST00000556737 ERVK-24P63145 666 aa12.37□□□□□ -0.43
SHMT2-224ENST00000556737 NUCB1Q02818 461 aa12.37□□□□□ -0.43
SHMT2-224ENST00000556737 USP17L24Q0WX57 530 aa12.37□□□□□ -0.43
SHMT2-224ENST00000556737 LRRFIP1Q32MZ4 808 aaKnown RBP12.37□□□□□ -0.43
SHMT2-224ENST00000556737 LBX2Q6XYB7 198 aa12.37□□□□□ -0.43
SHMT2-224ENST00000556737 CATSPERGQ6ZRH7 1159 aa12.37□□□□□ -0.43
SHMT2-224ENST00000556737 AMOTL1Q8IY63 956 aa12.37□□□□□ -0.43
SHMT2-224ENST00000556737 GTF3C2Q8WUA4 911 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-224ENST00000556737 SHISA4Q96DD7 197 aa12.37□□□□□ -0.43
SHMT2-224ENST00000556737 CCDC17Q96LX7 622 aa12.37□□□□□ -0.43
SHMT2-224ENST00000556737 RWDD1Q9H446 243 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-224ENST00000556737 GJD2Q9UKL4 321 aa12.37□□□□□ -0.43
SHMT2-224ENST00000556737 TMX2Q9Y320 296 aa12.37□□□□□ -0.43
SHMT2-224ENST00000556737 MYH4Q9Y623 1939 aa12.37□□□□□ -0.43
SHMT2-224ENST00000556737 LAMA4Q16363 1823 aa12.37□□□□□ -0.43
SHMT2-224ENST00000556737 PLIN4Q96Q06 1357 aa12.36□□□□□ -0.43
SHMT2-224ENST00000556737 ADCY3O60266 1144 aa12.36□□□□□ -0.43
SHMT2-224ENST00000556737 MYCP01106 439 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-224ENST00000556737 ELNP15502 786 aa12.36□□□□□ -0.43
SHMT2-224ENST00000556737 TDO2P48775 406 aa12.36□□□□□ -0.43
SHMT2-224ENST00000556737 Q3C1V9 767 aa12.36□□□□□ -0.43
SHMT2-224ENST00000556737 CCDC129Q6ZRS4 1044 aa12.36□□□□□ -0.43
SHMT2-224ENST00000556737 CHD1LQ86WJ1 897 aa12.36□□□□□ -0.43
SHMT2-224ENST00000556737 IFNL3Q8IZI9 196 aa12.36□□□□□ -0.43
SHMT2-224ENST00000556737 GPRC5AQ8NFJ5 357 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms