RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 IL25Q9H293 177 aa29.25■■■□□ 2.27
SDR39U1-221ENST00000556707 ANAPC4Q9UJX5 808 aa29.25■■■□□ 2.27
SDR39U1-221ENST00000556707 PDHXO00330 501 aa29.24■■■□□ 2.27
SDR39U1-221ENST00000556707 PDE4BQ07343 736 aa29.24■■■□□ 2.27
SDR39U1-221ENST00000556707 ZFYVE28Q9HCC9 887 aa29.24■■■□□ 2.27
SDR39U1-221ENST00000556707 LAMA4Q16363 1823 aa29.24■■■□□ 2.27
SDR39U1-221ENST00000556707 DSCC1Q9BVC3 393 aa29.23■■■□□ 2.27
SDR39U1-221ENST00000556707 AGTPBP1Q9UPW5 1226 aa29.23■■■□□ 2.27
SDR39U1-221ENST00000556707 SLC45A1Q9Y2W3 748 aa29.23■■■□□ 2.27
SDR39U1-221ENST00000556707 GPR25O00155 361 aa29.22■■■□□ 2.27
SDR39U1-221ENST00000556707 PRDM1O75626 825 aa29.22■■■□□ 2.27
SDR39U1-221ENST00000556707 CTDSPL2Q05D32 466 aa29.22■■■□□ 2.27
SDR39U1-221ENST00000556707 ACER1Q8TDN7 264 aa29.22■■■□□ 2.27
SDR39U1-221ENST00000556707 TMOD4Q9NZQ9 345 aa29.22■■■□□ 2.27
SDR39U1-221ENST00000556707 USP17L2Q6R6M4 530 aa29.21■■■□□ 2.27
SDR39U1-221ENST00000556707 ZNF444Q8N0Y2 327 aaPredicted RBP29.21■■■□□ 2.27
SDR39U1-221ENST00000556707 FEZ1Q99689 392 aa29.21■■■□□ 2.27
SDR39U1-221ENST00000556707 KIAA1683Q9H0B3 1180 aa29.21■■■□□ 2.27
SDR39U1-221ENST00000556707 MYH4Q9Y623 1939 aa29.2■■■□□ 2.27
SDR39U1-221ENST00000556707 SGSM2O43147 1006 aa29.2■■■□□ 2.26
SDR39U1-221ENST00000556707 ICA1Q05084 483 aa29.2■■■□□ 2.26
SDR39U1-221ENST00000556707 DGKZQ13574 1117 aa29.2■■■□□ 2.26
SDR39U1-221ENST00000556707 TREML2Q5T2D2 321 aa29.2■■■□□ 2.26
SDR39U1-221ENST00000556707 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.2■■■□□ 2.26
SDR39U1-221ENST00000556707 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.2■■■□□ 2.26
SDR39U1-221ENST00000556707 USP14P54578 494 aa29.19■■■□□ 2.26
SDR39U1-221ENST00000556707 PARK7Q99497 189 aaKnown RBP29.19■■■□□ 2.26
SDR39U1-221ENST00000556707 KANSL2Q9H9L4 492 aa29.19■■■□□ 2.26
SDR39U1-221ENST00000556707 EMILIN3Q9NT22 766 aa29.19■■■□□ 2.26
SDR39U1-221ENST00000556707 TLR2O60603 784 aa29.18■■■□□ 2.26
SDR39U1-221ENST00000556707 CLEC10AQ8IUN9 316 aa29.18■■■□□ 2.26
SDR39U1-221ENST00000556707 SIAH1Q8IUQ4 282 aa29.18■■■□□ 2.26
SDR39U1-221ENST00000556707 ZNF296Q8WUU4 475 aaPredicted RBP29.18■■■□□ 2.26
SDR39U1-221ENST00000556707 C12orf42Q96LP6 360 aa29.18■■■□□ 2.26
SDR39U1-221ENST00000556707 A0A1W2PRG0 241 aa29.17■■■□□ 2.26
SDR39U1-221ENST00000556707 FGRP09769 529 aa29.17■■■□□ 2.26
SDR39U1-221ENST00000556707 HAND2P61296 217 aa29.17■■■□□ 2.26
SDR39U1-221ENST00000556707 PABPC4Q13310 644 aaKnown RBP eCLIP29.17■■■□□ 2.26
SDR39U1-221ENST00000556707 ZYXQ15942 572 aaKnown RBP29.17■■■□□ 2.26
SDR39U1-221ENST00000556707 ARHGEF10LQ9HCE6 1279 aa29.17■■■□□ 2.26
SDR39U1-221ENST00000556707 TACC3Q9Y6A5 838 aa29.17■■■□□ 2.26
SDR39U1-221ENST00000556707 FKTNO75072 461 aa29.16■■■□□ 2.26
SDR39U1-221ENST00000556707 COL13A1Q5TAT6 717 aaPredicted RBP29.16■■■□□ 2.26
SDR39U1-221ENST00000556707 INCENPQ9NQS7 918 aa29.16■■■□□ 2.26
SDR39U1-221ENST00000556707 CTNNA3Q9UI47 895 aa29.16■■■□□ 2.26
SDR39U1-221ENST00000556707 PNMA3Q9UL41 463 aa29.16■■■□□ 2.26
SDR39U1-221ENST00000556707 ADGRA2Q96PE1 1338 aa29.16■■■□□ 2.26
SDR39U1-221ENST00000556707 PLIN4Q96Q06 1357 aa29.15■■■□□ 2.26
SDR39U1-221ENST00000556707 ORC4O43929 436 aa29.15■■■□□ 2.26
SDR39U1-221ENST00000556707 CYP2C8P10632 490 aa29.15■■■□□ 2.26
SDR39U1-221ENST00000556707 NEDD1Q8NHV4 660 aa29.15■■■□□ 2.26
SDR39U1-221ENST00000556707 NBPF3Q9H094 633 aa29.15■■■□□ 2.26
SDR39U1-221ENST00000556707 SH2D4AQ9H788 454 aa29.15■■■□□ 2.26
SDR39U1-221ENST00000556707 TMX2Q9Y320 296 aa29.15■■■□□ 2.26
SDR39U1-221ENST00000556707 IGKV6D-41A0A0C4DH26 115 aa29.14■■■□□ 2.26
SDR39U1-221ENST00000556707 ZNF213O14771 459 aa29.14■■■□□ 2.26
SDR39U1-221ENST00000556707 TSPY3P0CV98 308 aa29.14■■■□□ 2.26
SDR39U1-221ENST00000556707 TSPY8P0CW00 308 aa29.14■■■□□ 2.26
SDR39U1-221ENST00000556707 EEF2P13639 858 aaKnown RBP29.14■■■□□ 2.26
SDR39U1-221ENST00000556707 HOXA7P31268 230 aaPredicted RBP29.14■■■□□ 2.26
SDR39U1-221ENST00000556707 TFAP4Q01664 338 aa29.14■■■□□ 2.26
SDR39U1-221ENST00000556707 PCP11498 1178 aaKnown RBP29.13■■■□□ 2.25
SDR39U1-221ENST00000556707 PTH1RQ03431 593 aa29.13■■■□□ 2.25
SDR39U1-221ENST00000556707 FAM47AQ5JRC9 791 aa29.13■■■□□ 2.25
SDR39U1-221ENST00000556707 AKNAD1Q5T1N1 836 aa29.13■■■□□ 2.25
SDR39U1-221ENST00000556707 ESYT1Q9BSJ8 1104 aa29.13■■■□□ 2.25
SDR39U1-221ENST00000556707 ASCC2Q9H1I8 757 aaPredicted RBP29.13■■■□□ 2.25
SDR39U1-221ENST00000556707 NYAP2Q9P242 653 aa29.13■■■□□ 2.25
SDR39U1-221ENST00000556707 OSBPP22059 807 aa29.12■■■□□ 2.25
SDR39U1-221ENST00000556707 ATP2B2Q01814 1243 aa29.12■■■□□ 2.25
SDR39U1-221ENST00000556707 SP3Q02447 781 aa29.12■■■□□ 2.25
SDR39U1-221ENST00000556707 IMMTQ16891 758 aaKnown RBP29.12■■■□□ 2.25
SDR39U1-221ENST00000556707 C17orf99Q6UX52 265 aa29.12■■■□□ 2.25
SDR39U1-221ENST00000556707 TBC1D10CQ8IV04 446 aa29.12■■■□□ 2.25
SDR39U1-221ENST00000556707 STAG1Q8WVM7 1258 aa29.12■■■□□ 2.25
SDR39U1-221ENST00000556707 VCAM1P19320 739 aa29.11■■■□□ 2.25
SDR39U1-221ENST00000556707 MFSD6Q6ZSS7 791 aa29.11■■■□□ 2.25
SDR39U1-221ENST00000556707 SMCR8Q8TEV9 937 aaPredicted RBP29.11■■■□□ 2.25
SDR39U1-221ENST00000556707 CEP95Q96GE4 821 aa29.11■■■□□ 2.25
SDR39U1-221ENST00000556707 RNF41Q9H4P4 317 aaPredicted RBP29.11■■■□□ 2.25
SDR39U1-221ENST00000556707 TOMM22Q9NS69 142 aa29.11■■■□□ 2.25
SDR39U1-221ENST00000556707 CPA4Q9UI42 421 aa29.11■■■□□ 2.25
SDR39U1-221ENST00000556707 TSPY2A6NKD2 308 aa29.1■■■□□ 2.25
SDR39U1-221ENST00000556707 RANBP6O60518 1105 aaKnown RBP29.1■■■□□ 2.25
SDR39U1-221ENST00000556707 CDC45O75419 566 aa29.1■■■□□ 2.25
SDR39U1-221ENST00000556707 IRX3P78415 501 aaPredicted RBP29.1■■■□□ 2.25
SDR39U1-221ENST00000556707 VCPKMTQ9H867 229 aa29.1■■■□□ 2.25
SDR39U1-221ENST00000556707 MTMR4Q9NYA4 1195 aa29.1■■■□□ 2.25
SDR39U1-221ENST00000556707 RRP12Q5JTH9 1297 aaKnown RBP29.09■■■□□ 2.25
SDR39U1-221ENST00000556707 LPAR1Q92633 364 aa29.09■■■□□ 2.25
SDR39U1-221ENST00000556707 ERO1AQ96HE7 468 aa29.09■■■□□ 2.25
SDR39U1-221ENST00000556707 U3KPZ7 1027 aaPredicted RBP29.09■■■□□ 2.25
SDR39U1-221ENST00000556707 USP17L15C9J2P7 530 aa29.08■■■□□ 2.25
SDR39U1-221ENST00000556707 USP17L13C9JLJ4 530 aa29.08■■■□□ 2.25
SDR39U1-221ENST00000556707 USP17L11C9JVI0 530 aa29.08■■■□□ 2.25
SDR39U1-221ENST00000556707 USP17L18D6R9N7 530 aa29.08■■■□□ 2.25
SDR39U1-221ENST00000556707 USP17L22D6RA61 530 aa29.08■■■□□ 2.25
SDR39U1-221ENST00000556707 USP17L17D6RBQ6 530 aa29.08■■■□□ 2.25
SDR39U1-221ENST00000556707 USP17L19D6RCP7 530 aa29.08■■■□□ 2.25
SDR39U1-221ENST00000556707 USP17L20D6RJB6 530 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms