RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 HTTP42858 3142 aa13.85□□□□□ -0.19
SLIRP-205ENST00000556310 M0R2C6 588 aa13.84□□□□□ -0.19
SLIRP-205ENST00000556310 GNAT2P19087 354 aa13.84□□□□□ -0.19
SLIRP-205ENST00000556310 HMGCS2P54868 508 aa13.84□□□□□ -0.19
SLIRP-205ENST00000556310 MTMR2Q13614 643 aa13.84□□□□□ -0.19
SLIRP-205ENST00000556310 CERKLQ49MI3 558 aaPredicted RBP13.84□□□□□ -0.19
SLIRP-205ENST00000556310 SH3D19Q5HYK7 790 aa13.84□□□□□ -0.19
SLIRP-205ENST00000556310 GIMAP6Q6P9H5 292 aa13.84□□□□□ -0.19
SLIRP-205ENST00000556310 CD99L2Q8TCZ2 262 aa13.84□□□□□ -0.19
SLIRP-205ENST00000556310 ARPP21Q9UBL0 812 aaPredicted RBP13.84□□□□□ -0.19
SLIRP-205ENST00000556310 SWAP70Q9UH65 585 aa13.84□□□□□ -0.19
SLIRP-205ENST00000556310 MGAMO43451 1857 aa13.84□□□□□ -0.19
SLIRP-205ENST00000556310 USP17L12C9JPN9 530 aa13.83□□□□□ -0.2
SLIRP-205ENST00000556310 USP17L21D6R901 530 aa13.83□□□□□ -0.2
SLIRP-205ENST00000556310 BACE1P56817 501 aa13.83□□□□□ -0.2
SLIRP-205ENST00000556310 ABCB5Q2M3G0 1257 aa13.83□□□□□ -0.2
SLIRP-205ENST00000556310 ZMYM1Q5SVZ6 1142 aa13.83□□□□□ -0.2
SLIRP-205ENST00000556310 C12orf60Q5U649 245 aa13.83□□□□□ -0.2
SLIRP-205ENST00000556310 C17orf99Q6UX52 265 aa13.83□□□□□ -0.2
SLIRP-205ENST00000556310 TICAM2Q86XR7 235 aa13.83□□□□□ -0.2
SLIRP-205ENST00000556310 OSBPL3Q9H4L5 887 aa13.83□□□□□ -0.2
SLIRP-205ENST00000556310 GREB1LQ9C091 1923 aaPredicted RBP13.83□□□□□ -0.2
SLIRP-205ENST00000556310 ROBO3Q96MS0 1386 aa13.83□□□□□ -0.2
SLIRP-205ENST00000556310 CYP2D7A0A087X1C5 515 aa13.82□□□□□ -0.2
SLIRP-205ENST00000556310 GSG1L2A8MUP6 293 aa13.82□□□□□ -0.2
SLIRP-205ENST00000556310 C19orf81C9J6K1 198 aa13.82□□□□□ -0.2
SLIRP-205ENST00000556310 CYP2C8P10632 490 aa13.82□□□□□ -0.2
SLIRP-205ENST00000556310 TREML2Q5T2D2 321 aa13.82□□□□□ -0.2
SLIRP-205ENST00000556310 CTR9Q6PD62 1173 aa13.82□□□□□ -0.2
SLIRP-205ENST00000556310 FBXO46Q6PJ61 603 aaPredicted RBP13.82□□□□□ -0.2
SLIRP-205ENST00000556310 C16orf86Q6ZW13 317 aa13.82□□□□□ -0.2
SLIRP-205ENST00000556310 OTOP1Q7RTM1 612 aa13.82□□□□□ -0.2
SLIRP-205ENST00000556310 PLEKHM2Q8IWE5 1019 aa13.82□□□□□ -0.2
SLIRP-205ENST00000556310 SLC44A5Q8NCS7 719 aa13.82□□□□□ -0.2
SLIRP-205ENST00000556310 DYNLL2Q96FJ2 89 aa13.82□□□□□ -0.2
SLIRP-205ENST00000556310 EPB41L4AQ9HCS5 686 aaPredicted RBP13.82□□□□□ -0.2
SLIRP-205ENST00000556310 CABP5Q9NP86 173 aa13.82□□□□□ -0.2
SLIRP-205ENST00000556310 PNMA3Q9UL41 463 aa13.82□□□□□ -0.2
SLIRP-205ENST00000556310 TRPC6Q9Y210 931 aa13.82□□□□□ -0.2
SLIRP-205ENST00000556310 TRIM17Q9Y577 477 aa13.82□□□□□ -0.2
SLIRP-205ENST00000556310 USP17L10C9JJH3 530 aa13.81□□□□□ -0.2
SLIRP-205ENST00000556310 PABPC4Q13310 644 aaKnown RBP eCLIP13.81□□□□□ -0.23e-8■□□□□ 8.6
SLIRP-205ENST00000556310 RAB3GAP1Q15042 981 aa13.81□□□□□ -0.2
SLIRP-205ENST00000556310 ARHGEF6Q15052 776 aa13.81□□□□□ -0.2
SLIRP-205ENST00000556310 SBK1Q52WX2 424 aa13.81□□□□□ -0.2
SLIRP-205ENST00000556310 SEC62Q99442 399 aaKnown RBP13.81□□□□□ -0.2
SLIRP-205ENST00000556310 EFCC1Q9HA90 598 aa13.81□□□□□ -0.2
SLIRP-205ENST00000556310 TMOD4Q9NZQ9 345 aa13.81□□□□□ -0.2
SLIRP-205ENST00000556310 CPA4Q9UI42 421 aa13.81□□□□□ -0.2
SLIRP-205ENST00000556310 GALR2O43603 387 aaPredicted RBP13.8□□□□□ -0.2
SLIRP-205ENST00000556310 BCRP11274 1271 aa13.8□□□□□ -0.2
SLIRP-205ENST00000556310 TDO2P48775 406 aa13.8□□□□□ -0.2
SLIRP-205ENST00000556310 LACTBP83111 547 aaPredicted RBP13.8□□□□□ -0.2
SLIRP-205ENST00000556310 CAP1Q01518 475 aa13.8□□□□□ -0.2
SLIRP-205ENST00000556310 KIF22Q14807 665 aa13.8□□□□□ -0.2
SLIRP-205ENST00000556310 TMEM179Q6ZVK1 233 aa13.8□□□□□ -0.2
SLIRP-205ENST00000556310 SMCR8Q8TEV9 937 aaPredicted RBP13.8□□□□□ -0.2
SLIRP-205ENST00000556310 CCDC17Q96LX7 622 aa13.8□□□□□ -0.2
SLIRP-205ENST00000556310 FEZ1Q99689 392 aa13.8□□□□□ -0.2
SLIRP-205ENST00000556310 TMEM106CQ9BVX2 250 aa13.8□□□□□ -0.2
SLIRP-205ENST00000556310 TRIM6-TRIM34B2RNG4 842 aa13.79□□□□□ -0.2
SLIRP-205ENST00000556310 PATL2C9JE40 543 aaKnown RBP13.79□□□□□ -0.2
SLIRP-205ENST00000556310 SMIM22K7EJ46 135 aa13.79□□□□□ -0.2
SLIRP-205ENST00000556310 MPHOSPH10O00566 681 aaKnown RBP13.79□□□□□ -0.2
SLIRP-205ENST00000556310 APPP05067 770 aa13.79□□□□□ -0.2
SLIRP-205ENST00000556310 GUCY1A2P33402 732 aa13.79□□□□□ -0.2
SLIRP-205ENST00000556310 CDK8P49336 464 aa13.79□□□□□ -0.2
SLIRP-205ENST00000556310 USP14P54578 494 aa13.79□□□□□ -0.2
SLIRP-205ENST00000556310 SEPT2Q15019 361 aa13.79□□□□□ -0.2
SLIRP-205ENST00000556310 USP17L2Q6R6M4 530 aa13.79□□□□□ -0.2
SLIRP-205ENST00000556310 C12orf42Q96LP6 360 aa13.79□□□□□ -0.2
SLIRP-205ENST00000556310 NACAP1Q9BZK3 213 aa13.79□□□□□ -0.2
SLIRP-205ENST00000556310 KIAA1683Q9H0B3 1180 aa13.79□□□□□ -0.2
SLIRP-205ENST00000556310 HPS5Q9UPZ3 1129 aa13.79□□□□□ -0.2
SLIRP-205ENST00000556310 AKR1B1P15121 316 aa13.78□□□□□ -0.2
SLIRP-205ENST00000556310 OSBPP22059 807 aa13.78□□□□□ -0.2
SLIRP-205ENST00000556310 HOXA7P31268 230 aaPredicted RBP13.78□□□□□ -0.2
SLIRP-205ENST00000556310 IFNL3Q8IZI9 196 aa13.78□□□□□ -0.2
SLIRP-205ENST00000556310 ACER1Q8TDN7 264 aa13.78□□□□□ -0.2
SLIRP-205ENST00000556310 ARHGAP39Q9C0H5 1083 aa13.78□□□□□ -0.2
SLIRP-205ENST00000556310 NAPBQ9H115 298 aa13.78□□□□□ -0.2
SLIRP-205ENST00000556310 ASCC2Q9H1I8 757 aaPredicted RBP13.78□□□□□ -0.2
SLIRP-205ENST00000556310 HELLSQ9NRZ9 838 aa13.78□□□□□ -0.2
SLIRP-205ENST00000556310 EMILIN3Q9NT22 766 aa13.78□□□□□ -0.2
SLIRP-205ENST00000556310 A0A0D9SFI3 127 aa13.77□□□□□ -0.21
SLIRP-205ENST00000556310 CCDC85CA6NKD9 419 aa13.77□□□□□ -0.21
SLIRP-205ENST00000556310 MINDY4BA8MYZ0 360 aa13.77□□□□□ -0.21
SLIRP-205ENST00000556310 GNRH1P01148 92 aa13.77□□□□□ -0.21
SLIRP-205ENST00000556310 PDE4AP27815 886 aa13.77□□□□□ -0.21
SLIRP-205ENST00000556310 GCLCP48506 637 aaPredicted RBP13.77□□□□□ -0.21
SLIRP-205ENST00000556310 IRX3P78415 501 aaPredicted RBP13.77□□□□□ -0.21
SLIRP-205ENST00000556310 ICA1Q05084 483 aa13.77□□□□□ -0.21
SLIRP-205ENST00000556310 ZYXQ15942 572 aaKnown RBP13.77□□□□□ -0.21
SLIRP-205ENST00000556310 LAMA4Q16363 1823 aa13.77□□□□□ -0.21
SLIRP-205ENST00000556310 FAM110CQ1W6H9 321 aa13.77□□□□□ -0.21
SLIRP-205ENST00000556310 PARP14Q460N5 1801 aa13.77□□□□□ -0.21
SLIRP-205ENST00000556310 CCDC129Q6ZRS4 1044 aa13.77□□□□□ -0.21
SLIRP-205ENST00000556310 RILPL2Q969X0 211 aa13.77□□□□□ -0.21
SLIRP-205ENST00000556310 FAM227BQ96M60 508 aa13.77□□□□□ -0.21
SLIRP-205ENST00000556310 PTPN22Q9Y2R2 807 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms