RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 GUCY1A2P33402 732 aa16.14■□□□□ 0.17
TGFB3-204ENST00000556285 RAB3GAP1Q15042 981 aa16.14■□□□□ 0.17
TGFB3-204ENST00000556285 ABCB5Q2M3G0 1257 aa16.14■□□□□ 0.17
TGFB3-204ENST00000556285 CERKLQ49MI3 558 aaPredicted RBP16.14■□□□□ 0.17
TGFB3-204ENST00000556285 HSP90AB4PQ58FF6 505 aa16.14■□□□□ 0.17
TGFB3-204ENST00000556285 SLC9C2Q5TAH2 1124 aa16.14■□□□□ 0.17
TGFB3-204ENST00000556285 TTC6Q86TZ1 520 aa16.14■□□□□ 0.17
TGFB3-204ENST00000556285 C7orf61Q8IZ16 206 aa16.14■□□□□ 0.17
TGFB3-204ENST00000556285 DNAJC2Q99543 621 aaKnown RBP16.14■□□□□ 0.17
TGFB3-204ENST00000556285 RTN4Q9NQC3 1192 aaKnown RBP16.14■□□□□ 0.17
TGFB3-204ENST00000556285 ZMYND8Q9ULU4 1186 aaPredicted RBP16.14■□□□□ 0.17
TGFB3-204ENST00000556285 PFASO15067 1338 aa16.14■□□□□ 0.17
TGFB3-204ENST00000556285 ZNF532Q9HCE3 1301 aa16.14■□□□□ 0.17
TGFB3-204ENST00000556285 TCRBV5S4A2TA0A5A2 114 aa16.13■□□□□ 0.17
TGFB3-204ENST00000556285 CNMDO75829 334 aa16.13■□□□□ 0.17
TGFB3-204ENST00000556285 CYP2D6P10635 497 aa16.13■□□□□ 0.17
TGFB3-204ENST00000556285 SYN1P17600 705 aa16.13■□□□□ 0.17
TGFB3-204ENST00000556285 ERVK-9P63128 1117 aa16.13■□□□□ 0.17
TGFB3-204ENST00000556285 ERVK-24P63145 666 aa16.13■□□□□ 0.17
TGFB3-204ENST00000556285 MAP3K21Q5TCX8 1036 aa16.13■□□□□ 0.17
TGFB3-204ENST00000556285 CERS3Q8IU89 383 aa16.13■□□□□ 0.17
TGFB3-204ENST00000556285 RPAP2Q8IXW5 612 aaPredicted RBP16.13■□□□□ 0.17
TGFB3-204ENST00000556285 CLASRPQ8N2M8 674 aaKnown RBP16.13■□□□□ 0.17
TGFB3-204ENST00000556285 LCORLQ8N3X6 602 aa16.13■□□□□ 0.17
TGFB3-204ENST00000556285 USP6NLQ92738 828 aa16.13■□□□□ 0.17
TGFB3-204ENST00000556285 KIF1BPQ96EK5 621 aa16.13■□□□□ 0.17
TGFB3-204ENST00000556285 FEZ1Q99689 392 aa16.13■□□□□ 0.17
TGFB3-204ENST00000556285 NR2E3Q9Y5X4 410 aa16.13■□□□□ 0.17
TGFB3-204ENST00000556285 A0A0G2JMZ2 1700 aa16.13■□□□□ 0.17
TGFB3-204ENST00000556285 RPTORQ8N122 1335 aa16.13■□□□□ 0.17
TGFB3-204ENST00000556285 COL11A1P12107 1806 aaPredicted RBP16.12■□□□□ 0.17
TGFB3-204ENST00000556285 CHGBP05060 677 aa16.12■□□□□ 0.17
TGFB3-204ENST00000556285 POLR3DP05423 398 aaPredicted RBP16.12■□□□□ 0.17
TGFB3-204ENST00000556285 IFIT2P09913 472 aaKnown RBP16.12■□□□□ 0.17
TGFB3-204ENST00000556285 GABPAQ06546 454 aa16.12■□□□□ 0.17
TGFB3-204ENST00000556285 TTF1Q15361 905 aaPredicted RBP16.12■□□□□ 0.17
TGFB3-204ENST00000556285 GPR142Q7Z601 462 aa16.12■□□□□ 0.17
TGFB3-204ENST00000556285 NECAB2Q7Z6G3 386 aa16.12■□□□□ 0.17
TGFB3-204ENST00000556285 SDR42E1Q8WUS8 393 aa16.12■□□□□ 0.17
TGFB3-204ENST00000556285 C12orf42Q96LP6 360 aa16.12■□□□□ 0.17
TGFB3-204ENST00000556285 GDF15Q99988 308 aa16.12■□□□□ 0.17
TGFB3-204ENST00000556285 NUDT12Q9BQG2 462 aa16.12■□□□□ 0.17
TGFB3-204ENST00000556285 KIAA1683Q9H0B3 1180 aa16.12■□□□□ 0.17
TGFB3-204ENST00000556285 HMX1Q9NP08 348 aaPredicted RBP16.12■□□□□ 0.17
TGFB3-204ENST00000556285 ZNFX1Q9P2E3 1918 aaKnown RBP16.11■□□□□ 0.17
TGFB3-204ENST00000556285 LTBP2Q14767 1821 aa16.11■□□□□ 0.17
TGFB3-204ENST00000556285 SMIM22K7EJ46 135 aa16.11■□□□□ 0.17
TGFB3-204ENST00000556285 PRKAB2O43741 272 aa16.11■□□□□ 0.17
TGFB3-204ENST00000556285 MS4A1P11836 297 aa16.11■□□□□ 0.17
TGFB3-204ENST00000556285 PRKAR2AP13861 404 aaKnown RBP16.11■□□□□ 0.17
TGFB3-204ENST00000556285 VCAM1P19320 739 aa16.11■□□□□ 0.17
TGFB3-204ENST00000556285 CCND3P30281 292 aaPredicted RBP16.11■□□□□ 0.17
TGFB3-204ENST00000556285 MAPK4P31152 587 aa16.11■□□□□ 0.17
TGFB3-204ENST00000556285 SEPT2Q15019 361 aa16.11■□□□□ 0.17
TGFB3-204ENST00000556285 MORN1Q5T089 497 aa16.11■□□□□ 0.17
TGFB3-204ENST00000556285 C20orf194Q5TEA3 1177 aa16.11■□□□□ 0.17
TGFB3-204ENST00000556285 CATSPERGQ6ZRH7 1159 aa16.11■□□□□ 0.17
TGFB3-204ENST00000556285 SLC44A5Q8NCS7 719 aa16.11■□□□□ 0.17
TGFB3-204ENST00000556285 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.11■□□□□ 0.17
TGFB3-204ENST00000556285 CRNKL1Q9BZJ0 848 aaKnown RBP16.11■□□□□ 0.17
TGFB3-204ENST00000556285 BOLA2Q9H3K6 86 aa16.11■□□□□ 0.17
TGFB3-204ENST00000556285 ARMT1Q9H993 441 aa16.11■□□□□ 0.17
TGFB3-204ENST00000556285 MCM9Q9NXL9 1143 aa16.11■□□□□ 0.17
TGFB3-204ENST00000556285 OGDHLQ9ULD0 1010 aa16.11■□□□□ 0.17
TGFB3-204ENST00000556285 DDX19BQ9UMR2 479 aa16.11■□□□□ 0.17
TGFB3-204ENST00000556285 MYH7P12883 1935 aa16.1■□□□□ 0.17
TGFB3-204ENST00000556285 A0A1W2PRG0 241 aa16.1■□□□□ 0.17
TGFB3-204ENST00000556285 USP17L15C9J2P7 530 aa16.1■□□□□ 0.17
TGFB3-204ENST00000556285 USP17L13C9JLJ4 530 aa16.1■□□□□ 0.17
TGFB3-204ENST00000556285 USP17L11C9JVI0 530 aa16.1■□□□□ 0.17
TGFB3-204ENST00000556285 USP17L18D6R9N7 530 aa16.1■□□□□ 0.17
TGFB3-204ENST00000556285 USP17L22D6RA61 530 aa16.1■□□□□ 0.17
TGFB3-204ENST00000556285 USP17L17D6RBQ6 530 aa16.1■□□□□ 0.17
TGFB3-204ENST00000556285 USP17L19D6RCP7 530 aa16.1■□□□□ 0.17
TGFB3-204ENST00000556285 USP17L20D6RJB6 530 aa16.1■□□□□ 0.17
TGFB3-204ENST00000556285 CACNB2Q08289 660 aaPredicted RBP16.1■□□□□ 0.17
TGFB3-204ENST00000556285 USP17L24Q0WX57 530 aa16.1■□□□□ 0.17
TGFB3-204ENST00000556285 TMED8Q6PL24 325 aaPredicted RBP16.1■□□□□ 0.17
TGFB3-204ENST00000556285 PLEKHH3Q7Z736 793 aa16.1■□□□□ 0.17
TGFB3-204ENST00000556285 SOCS4Q8WXH5 440 aa16.1■□□□□ 0.17
TGFB3-204ENST00000556285 DCP1AQ9NPI6 582 aaPredicted RBP16.1■□□□□ 0.17
TGFB3-204ENST00000556285 FLRT1Q9NZU1 646 aa16.1■□□□□ 0.17
TGFB3-204ENST00000556285 BTBD7Q9P203 1132 aa16.1■□□□□ 0.17
TGFB3-204ENST00000556285 HMMRO75330 724 aa16.09■□□□□ 0.17
TGFB3-204ENST00000556285 XRCC5P13010 732 aaKnown RBP16.09■□□□□ 0.17
TGFB3-204ENST00000556285 KIAA1755Q5JYT7 1200 aa16.09■□□□□ 0.17
TGFB3-204ENST00000556285 LHX8Q68G74 356 aa16.09■□□□□ 0.17
TGFB3-204ENST00000556285 ANKLE1Q8NAG6 615 aa16.09■□□□□ 0.17
TGFB3-204ENST00000556285 DYNLL2Q96FJ2 89 aa16.09■□□□□ 0.17
TGFB3-204ENST00000556285 C11orf49Q9H6J7 331 aa16.09■□□□□ 0.17
TGFB3-204ENST00000556285 RPAP3Q9H6T3 665 aaPredicted RBP16.09■□□□□ 0.17
TGFB3-204ENST00000556285 CABP5Q9NP86 173 aa16.09■□□□□ 0.17
TGFB3-204ENST00000556285 RCAN3Q9UKA8 241 aa16.09■□□□□ 0.17
TGFB3-204ENST00000556285 RABGAP1Q9Y3P9 1069 aa16.09■□□□□ 0.17
TGFB3-204ENST00000556285 CYP2D7A0A087X1C5 515 aa16.08■□□□□ 0.16
TGFB3-204ENST00000556285 MPHOSPH10O00566 681 aaKnown RBP16.08■□□□□ 0.16
TGFB3-204ENST00000556285 SMARCA5O60264 1052 aaPredicted RBP16.08■□□□□ 0.16
TGFB3-204ENST00000556285 RAB11FIP3O75154 756 aa16.08■□□□□ 0.16
TGFB3-204ENST00000556285 MBD4O95243 580 aa16.08■□□□□ 0.16
TGFB3-204ENST00000556285 ZKSCAN1P17029 563 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms