RNA–Protein interactions for RNA: ENST00000556071.5

LINC00871-202, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-202ENST00000556071 CDCP2Q5VXM1 449 aa9.43□□□□□ -0.9
LINC00871-202ENST00000556071 NLRC3Q7RTR2 1065 aa9.43□□□□□ -0.9
LINC00871-202ENST00000556071 SEC16BQ96JE7 1060 aa9.43□□□□□ -0.9
LINC00871-202ENST00000556071 CCDC74BQ96LY2 380 aa9.43□□□□□ -0.9
LINC00871-202ENST00000556071 CNNM2Q9H8M5 875 aa9.43□□□□□ -0.9
LINC00871-202ENST00000556071 IGF2BP3O00425 579 aaKnown RBP eCLIP9.42□□□□□ -0.9
LINC00871-202ENST00000556071 ATF4P18848 351 aaPredicted RBP9.42□□□□□ -0.9
LINC00871-202ENST00000556071 POLR2BP30876 1174 aaKnown RBP9.42□□□□□ -0.9
LINC00871-202ENST00000556071 GNL2Q13823 731 aaKnown RBP9.42□□□□□ -0.9
LINC00871-202ENST00000556071 MSMPQ1L6U9 139 aa9.42□□□□□ -0.9
LINC00871-202ENST00000556071 INTS5Q6P9B9 1019 aaKnown RBP9.42□□□□□ -0.9
LINC00871-202ENST00000556071 PLD6Q8N2A8 252 aaKnown RBP9.42□□□□□ -0.9
LINC00871-202ENST00000556071 CEP131Q9UPN4 1083 aa9.42□□□□□ -0.9
LINC00871-202ENST00000556071 MAPK8IP1Q9UQF2 711 aa9.42□□□□□ -0.9
LINC00871-202ENST00000556071 PRR33A8MZF0 331 aa9.41□□□□□ -0.9
LINC00871-202ENST00000556071 RGS13O14921 159 aa9.41□□□□□ -0.9
LINC00871-202ENST00000556071 NME1P15531 152 aaKnown RBP9.41□□□□□ -0.9
LINC00871-202ENST00000556071 ITIH2P19823 946 aa9.41□□□□□ -0.9
LINC00871-202ENST00000556071 ETV3P41162 512 aa9.41□□□□□ -0.9
LINC00871-202ENST00000556071 SFRP5Q5T4F7 317 aa9.41□□□□□ -0.9
LINC00871-202ENST00000556071 ZNF746Q6NUN9 644 aaPredicted RBP9.41□□□□□ -0.9
LINC00871-202ENST00000556071 ARHGAP27Q6ZUM4 889 aa9.41□□□□□ -0.9
LINC00871-202ENST00000556071 UBOX5O94941 541 aa9.4□□□□□ -0.9
LINC00871-202ENST00000556071 LSRQ86X29 649 aaPredicted RBP9.4□□□□□ -0.9
LINC00871-202ENST00000556071 RBBP8NLQ8NC74 664 aaPredicted RBP9.4□□□□□ -0.9
LINC00871-202ENST00000556071 SRRTQ9BXP5 876 aaKnown RBP9.4□□□□□ -0.9
LINC00871-202ENST00000556071 MKNK2Q9HBH9 465 aa9.4□□□□□ -0.9
LINC00871-202ENST00000556071 SCO2A0A1W2PP80 73 aa9.39□□□□□ -0.91
LINC00871-202ENST00000556071 GNAT3A8MTJ3 354 aa9.39□□□□□ -0.91
LINC00871-202ENST00000556071 KIAA1324LA8MWY0 1029 aaPredicted RBP9.39□□□□□ -0.91
LINC00871-202ENST00000556071 CEACAM5P06731 702 aa9.39□□□□□ -0.91
LINC00871-202ENST00000556071 GBP1P32455 592 aa9.39□□□□□ -0.91
LINC00871-202ENST00000556071 ZC3H6P61129 1189 aaKnown RBP9.39□□□□□ -0.91
LINC00871-202ENST00000556071 RUFY4Q6ZNE9 571 aa9.39□□□□□ -0.91
LINC00871-202ENST00000556071 NETO1Q8TDF5 533 aa9.39□□□□□ -0.91
LINC00871-202ENST00000556071 PLAGL2Q9UPG8 496 aa9.39□□□□□ -0.91
LINC00871-202ENST00000556071 TNFRSF10CO14798 259 aa9.38□□□□□ -0.91
LINC00871-202ENST00000556071 CBX7O95931 251 aa9.38□□□□□ -0.91
LINC00871-202ENST00000556071 ZNF865P0CJ78 1059 aaPredicted RBP9.38□□□□□ -0.91
LINC00871-202ENST00000556071 ACRP10323 421 aa9.38□□□□□ -0.91
LINC00871-202ENST00000556071 SPINK2P20155 84 aa9.38□□□□□ -0.91
LINC00871-202ENST00000556071 CYP7A1P22680 504 aa9.38□□□□□ -0.91
LINC00871-202ENST00000556071 EIF6P56537 245 aaKnown RBP9.38□□□□□ -0.91
LINC00871-202ENST00000556071 LRP8Q14114 963 aa9.38□□□□□ -0.91
LINC00871-202ENST00000556071 VPS37DQ86XT2 251 aa9.38□□□□□ -0.91
LINC00871-202ENST00000556071 CRBNQ96SW2 442 aa9.38□□□□□ -0.91
LINC00871-202ENST00000556071 SLC9A7Q96T83 725 aa9.38□□□□□ -0.91
LINC00871-202ENST00000556071 COL17A1Q9UMD9 1497 aaPredicted RBP9.38□□□□□ -0.91
LINC00871-202ENST00000556071 FAM86C2PA6NEL3 165 aa9.37□□□□□ -0.91
LINC00871-202ENST00000556071 DNAJA1P31689 397 aaKnown RBP9.37□□□□□ -0.91
LINC00871-202ENST00000556071 GIPRP48546 466 aa9.37□□□□□ -0.91
LINC00871-202ENST00000556071 NKPD1Q17RQ9 610 aa9.37□□□□□ -0.91
LINC00871-202ENST00000556071 NAALADL2Q58DX5 795 aa9.37□□□□□ -0.91
LINC00871-202ENST00000556071 C22orf34Q6ZV56 151 aa9.37□□□□□ -0.91
LINC00871-202ENST00000556071 DTX1Q86Y01 620 aa9.37□□□□□ -0.91
LINC00871-202ENST00000556071 SPACA3Q8IXA5 215 aa9.37□□□□□ -0.91
LINC00871-202ENST00000556071 MFSD4AQ8N468 514 aa9.37□□□□□ -0.91
LINC00871-202ENST00000556071 CPLX3Q8WVH0 158 aa9.37□□□□□ -0.91
LINC00871-202ENST00000556071 SHDQ96IW2 340 aa9.37□□□□□ -0.91
LINC00871-202ENST00000556071 KREMEN1Q96MU8 473 aa9.37□□□□□ -0.91
LINC00871-202ENST00000556071 TM9SF2Q99805 663 aa9.37□□□□□ -0.91
LINC00871-202ENST00000556071 PCMTD2Q9NV79 361 aa9.37□□□□□ -0.91
LINC00871-202ENST00000556071 HYAL3O43820 417 aaPredicted RBP9.36□□□□□ -0.91
LINC00871-202ENST00000556071 IFI16Q16666 785 aaKnown RBP9.36□□□□□ -0.91
LINC00871-202ENST00000556071 SLC43A3Q8NBI5 491 aa9.36□□□□□ -0.91
LINC00871-202ENST00000556071 COX4I2Q96KJ9 171 aa9.36□□□□□ -0.91
LINC00871-202ENST00000556071 STRIP2Q9ULQ0 834 aa9.36□□□□□ -0.91
LINC00871-202ENST00000556071 CAPN6Q9Y6Q1 641 aa9.36□□□□□ -0.91
LINC00871-202ENST00000556071 FGRP09769 529 aa9.35□□□□□ -0.91
LINC00871-202ENST00000556071 ARID5AQ03989 594 aa9.35□□□□□ -0.91
LINC00871-202ENST00000556071 INTS3Q68E01 1043 aaKnown RBP9.35□□□□□ -0.91
LINC00871-202ENST00000556071 RNF141Q8WVD5 230 aa9.35□□□□□ -0.91
LINC00871-202ENST00000556071 Q96M66 194 aa9.35□□□□□ -0.91
LINC00871-202ENST00000556071 TNKS2Q9H2K2 1166 aa9.35□□□□□ -0.91
LINC00871-202ENST00000556071 BSDC1Q9NW68 430 aaPredicted RBP9.35□□□□□ -0.91
LINC00871-202ENST00000556071 FAM155AB1AL88 458 aaPredicted RBP9.34□□□□□ -0.91
LINC00871-202ENST00000556071 LRRN2O75325 713 aa9.34□□□□□ -0.91
LINC00871-202ENST00000556071 GUCY2CP25092 1073 aa9.34□□□□□ -0.91
LINC00871-202ENST00000556071 CCNFP41002 786 aa9.34□□□□□ -0.91
LINC00871-202ENST00000556071 KIR3DL1P43629 444 aa9.34□□□□□ -0.91
LINC00871-202ENST00000556071 CHMP4BP1P59074 171 aa9.34□□□□□ -0.91
LINC00871-202ENST00000556071 TNK2Q07912 1038 aa9.34□□□□□ -0.91
LINC00871-202ENST00000556071 ZYXQ15942 572 aaKnown RBP9.34□□□□□ -0.91
LINC00871-202ENST00000556071 ARTNQ5T4W7 220 aa9.34□□□□□ -0.91
LINC00871-202ENST00000556071 MCF2L2Q86YR7 1114 aa9.34□□□□□ -0.91
LINC00871-202ENST00000556071 TMEM192Q8IY95 271 aa9.34□□□□□ -0.91
LINC00871-202ENST00000556071 TAB3Q8N5C8 712 aaPredicted RBP9.34□□□□□ -0.91
LINC00871-202ENST00000556071 ANAPC16Q96DE5 110 aa9.34□□□□□ -0.91
LINC00871-202ENST00000556071 SLC6A18Q96N87 628 aa9.34□□□□□ -0.91
LINC00871-202ENST00000556071 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.34□□□□□ -0.91
LINC00871-202ENST00000556071 KRTAP9-2Q9BYQ4 174 aa9.34□□□□□ -0.91
LINC00871-202ENST00000556071 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.34□□□□□ -0.91
LINC00871-202ENST00000556071 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.33□□□□□ -0.92
LINC00871-202ENST00000556071 CLEC3AO75596 197 aa9.33□□□□□ -0.92
LINC00871-202ENST00000556071 CDKAL1Q5VV42 579 aa9.33□□□□□ -0.92
LINC00871-202ENST00000556071 FAM169BQ8N8A8 192 aa9.33□□□□□ -0.92
LINC00871-202ENST00000556071 VWCEQ96DN2 955 aa9.33□□□□□ -0.92
LINC00871-202ENST00000556071 C8orf37Q96NL8 207 aa9.33□□□□□ -0.92
LINC00871-202ENST00000556071 GMLQ99445 158 aa9.33□□□□□ -0.92
LINC00871-202ENST00000556071 MRVI1Q9Y6F6 885 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms