RNA–Protein interactions for RNA: ENST00000556071.5

LINC00871-202, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 554 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-202ENST00000556071 CDCP2Q5VXM1 449 aa9.43□□□□□ -0.9
LINC00871-202ENST00000556071 NLRC3Q7RTR2 1065 aa9.43□□□□□ -0.9
LINC00871-202ENST00000556071 SEC16BQ96JE7 1060 aa9.43□□□□□ -0.9
LINC00871-202ENST00000556071 CCDC74BQ96LY2 380 aa9.43□□□□□ -0.9
LINC00871-202ENST00000556071 CNNM2Q9H8M5 875 aa9.43□□□□□ -0.9
LINC00871-202ENST00000556071 IGF2BP3O00425 579 aaKnown RBP eCLIP9.42□□□□□ -0.9
LINC00871-202ENST00000556071 ATF4P18848 351 aaPredicted RBP9.42□□□□□ -0.9
LINC00871-202ENST00000556071 POLR2BP30876 1174 aaKnown RBP9.42□□□□□ -0.9
LINC00871-202ENST00000556071 GNL2Q13823 731 aaKnown RBP9.42□□□□□ -0.9
LINC00871-202ENST00000556071 MSMPQ1L6U9 139 aa9.42□□□□□ -0.9
LINC00871-202ENST00000556071 INTS5Q6P9B9 1019 aaKnown RBP9.42□□□□□ -0.9
LINC00871-202ENST00000556071 PLD6Q8N2A8 252 aaKnown RBP9.42□□□□□ -0.9
LINC00871-202ENST00000556071 CEP131Q9UPN4 1083 aa9.42□□□□□ -0.9
LINC00871-202ENST00000556071 MAPK8IP1Q9UQF2 711 aa9.42□□□□□ -0.9
LINC00871-202ENST00000556071 PRR33A8MZF0 331 aa9.41□□□□□ -0.9
LINC00871-202ENST00000556071 RGS13O14921 159 aa9.41□□□□□ -0.9
LINC00871-202ENST00000556071 NME1P15531 152 aaKnown RBP9.41□□□□□ -0.9
LINC00871-202ENST00000556071 ITIH2P19823 946 aa9.41□□□□□ -0.9
LINC00871-202ENST00000556071 ETV3P41162 512 aa9.41□□□□□ -0.9
LINC00871-202ENST00000556071 SFRP5Q5T4F7 317 aa9.41□□□□□ -0.9
LINC00871-202ENST00000556071 ZNF746Q6NUN9 644 aaPredicted RBP9.41□□□□□ -0.9
LINC00871-202ENST00000556071 ARHGAP27Q6ZUM4 889 aa9.41□□□□□ -0.9
LINC00871-202ENST00000556071 UBOX5O94941 541 aa9.4□□□□□ -0.9
LINC00871-202ENST00000556071 LSRQ86X29 649 aaPredicted RBP9.4□□□□□ -0.9
LINC00871-202ENST00000556071 RBBP8NLQ8NC74 664 aaPredicted RBP9.4□□□□□ -0.9
LINC00871-202ENST00000556071 SRRTQ9BXP5 876 aaKnown RBP9.4□□□□□ -0.9
LINC00871-202ENST00000556071 MKNK2Q9HBH9 465 aa9.4□□□□□ -0.9
LINC00871-202ENST00000556071 SCO2A0A1W2PP80 73 aa9.39□□□□□ -0.91
LINC00871-202ENST00000556071 GNAT3A8MTJ3 354 aa9.39□□□□□ -0.91
LINC00871-202ENST00000556071 KIAA1324LA8MWY0 1029 aaPredicted RBP9.39□□□□□ -0.91
LINC00871-202ENST00000556071 CEACAM5P06731 702 aa9.39□□□□□ -0.91
LINC00871-202ENST00000556071 GBP1P32455 592 aa9.39□□□□□ -0.91
LINC00871-202ENST00000556071 ZC3H6P61129 1189 aaKnown RBP9.39□□□□□ -0.91
LINC00871-202ENST00000556071 RUFY4Q6ZNE9 571 aa9.39□□□□□ -0.91
LINC00871-202ENST00000556071 NETO1Q8TDF5 533 aa9.39□□□□□ -0.91
LINC00871-202ENST00000556071 PLAGL2Q9UPG8 496 aa9.39□□□□□ -0.91
LINC00871-202ENST00000556071 TNFRSF10CO14798 259 aa9.38□□□□□ -0.91
LINC00871-202ENST00000556071 CBX7O95931 251 aa9.38□□□□□ -0.91
LINC00871-202ENST00000556071 ZNF865P0CJ78 1059 aaPredicted RBP9.38□□□□□ -0.91
LINC00871-202ENST00000556071 ACRP10323 421 aa9.38□□□□□ -0.91
LINC00871-202ENST00000556071 SPINK2P20155 84 aa9.38□□□□□ -0.91
LINC00871-202ENST00000556071 CYP7A1P22680 504 aa9.38□□□□□ -0.91
LINC00871-202ENST00000556071 EIF6P56537 245 aaKnown RBP9.38□□□□□ -0.91
LINC00871-202ENST00000556071 LRP8Q14114 963 aa9.38□□□□□ -0.91
LINC00871-202ENST00000556071 VPS37DQ86XT2 251 aa9.38□□□□□ -0.91
LINC00871-202ENST00000556071 CRBNQ96SW2 442 aa9.38□□□□□ -0.91
LINC00871-202ENST00000556071 SLC9A7Q96T83 725 aa9.38□□□□□ -0.91
LINC00871-202ENST00000556071 COL17A1Q9UMD9 1497 aaPredicted RBP9.38□□□□□ -0.91
LINC00871-202ENST00000556071 FAM86C2PA6NEL3 165 aa9.37□□□□□ -0.91
LINC00871-202ENST00000556071 DNAJA1P31689 397 aaKnown RBP9.37□□□□□ -0.91
LINC00871-202ENST00000556071 GIPRP48546 466 aa9.37□□□□□ -0.91
LINC00871-202ENST00000556071 NKPD1Q17RQ9 610 aa9.37□□□□□ -0.91
LINC00871-202ENST00000556071 NAALADL2Q58DX5 795 aa9.37□□□□□ -0.91
LINC00871-202ENST00000556071 C22orf34Q6ZV56 151 aa9.37□□□□□ -0.91
LINC00871-202ENST00000556071 DTX1Q86Y01 620 aa9.37□□□□□ -0.91
LINC00871-202ENST00000556071 SPACA3Q8IXA5 215 aa9.37□□□□□ -0.91
LINC00871-202ENST00000556071 MFSD4AQ8N468 514 aa9.37□□□□□ -0.91
LINC00871-202ENST00000556071 CPLX3Q8WVH0 158 aa9.37□□□□□ -0.91
LINC00871-202ENST00000556071 SHDQ96IW2 340 aa9.37□□□□□ -0.91
LINC00871-202ENST00000556071 KREMEN1Q96MU8 473 aa9.37□□□□□ -0.91
LINC00871-202ENST00000556071 TM9SF2Q99805 663 aa9.37□□□□□ -0.91
LINC00871-202ENST00000556071 PCMTD2Q9NV79 361 aa9.37□□□□□ -0.91
LINC00871-202ENST00000556071 HYAL3O43820 417 aaPredicted RBP9.36□□□□□ -0.91
LINC00871-202ENST00000556071 IFI16Q16666 785 aaKnown RBP9.36□□□□□ -0.91
LINC00871-202ENST00000556071 SLC43A3Q8NBI5 491 aa9.36□□□□□ -0.91
LINC00871-202ENST00000556071 COX4I2Q96KJ9 171 aa9.36□□□□□ -0.91
LINC00871-202ENST00000556071 STRIP2Q9ULQ0 834 aa9.36□□□□□ -0.91
LINC00871-202ENST00000556071 CAPN6Q9Y6Q1 641 aa9.36□□□□□ -0.91
LINC00871-202ENST00000556071 FGRP09769 529 aa9.35□□□□□ -0.91
LINC00871-202ENST00000556071 ARID5AQ03989 594 aa9.35□□□□□ -0.91
LINC00871-202ENST00000556071 INTS3Q68E01 1043 aaKnown RBP9.35□□□□□ -0.91
LINC00871-202ENST00000556071 RNF141Q8WVD5 230 aa9.35□□□□□ -0.91
LINC00871-202ENST00000556071 Q96M66 194 aa9.35□□□□□ -0.91
LINC00871-202ENST00000556071 TNKS2Q9H2K2 1166 aa9.35□□□□□ -0.91
LINC00871-202ENST00000556071 BSDC1Q9NW68 430 aaPredicted RBP9.35□□□□□ -0.91
LINC00871-202ENST00000556071 FAM155AB1AL88 458 aaPredicted RBP9.34□□□□□ -0.91
LINC00871-202ENST00000556071 LRRN2O75325 713 aa9.34□□□□□ -0.91
LINC00871-202ENST00000556071 GUCY2CP25092 1073 aa9.34□□□□□ -0.91
LINC00871-202ENST00000556071 CCNFP41002 786 aa9.34□□□□□ -0.91
LINC00871-202ENST00000556071 KIR3DL1P43629 444 aa9.34□□□□□ -0.91
LINC00871-202ENST00000556071 CHMP4BP1P59074 171 aa9.34□□□□□ -0.91
LINC00871-202ENST00000556071 TNK2Q07912 1038 aa9.34□□□□□ -0.91
LINC00871-202ENST00000556071 ZYXQ15942 572 aaKnown RBP9.34□□□□□ -0.91
LINC00871-202ENST00000556071 ARTNQ5T4W7 220 aa9.34□□□□□ -0.91
LINC00871-202ENST00000556071 MCF2L2Q86YR7 1114 aa9.34□□□□□ -0.91
LINC00871-202ENST00000556071 TMEM192Q8IY95 271 aa9.34□□□□□ -0.91
LINC00871-202ENST00000556071 TAB3Q8N5C8 712 aaPredicted RBP9.34□□□□□ -0.91
LINC00871-202ENST00000556071 ANAPC16Q96DE5 110 aa9.34□□□□□ -0.91
LINC00871-202ENST00000556071 SLC6A18Q96N87 628 aa9.34□□□□□ -0.91
LINC00871-202ENST00000556071 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.34□□□□□ -0.91
LINC00871-202ENST00000556071 KRTAP9-2Q9BYQ4 174 aa9.34□□□□□ -0.91
LINC00871-202ENST00000556071 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.34□□□□□ -0.91
LINC00871-202ENST00000556071 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.33□□□□□ -0.92
LINC00871-202ENST00000556071 CLEC3AO75596 197 aa9.33□□□□□ -0.92
LINC00871-202ENST00000556071 CDKAL1Q5VV42 579 aa9.33□□□□□ -0.92
LINC00871-202ENST00000556071 FAM169BQ8N8A8 192 aa9.33□□□□□ -0.92
LINC00871-202ENST00000556071 VWCEQ96DN2 955 aa9.33□□□□□ -0.92
LINC00871-202ENST00000556071 C8orf37Q96NL8 207 aa9.33□□□□□ -0.92
LINC00871-202ENST00000556071 GMLQ99445 158 aa9.33□□□□□ -0.92
LINC00871-202ENST00000556071 MRVI1Q9Y6F6 885 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms