RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 SEPT2Q15019 361 aa9□□□□□ -0.97
TDP1-214ENST00000556063 SPRYD7Q5W111 196 aa9□□□□□ -0.97
TDP1-214ENST00000556063 REM2Q8IYK8 340 aaPredicted RBP9□□□□□ -0.97
TDP1-214ENST00000556063 ZNF280CQ8ND82 737 aa9□□□□□ -0.97
TDP1-214ENST00000556063 KCNB2Q92953 911 aa9□□□□□ -0.97
TDP1-214ENST00000556063 OTUD5Q96G74 571 aa9□□□□□ -0.97
TDP1-214ENST00000556063 WNK4Q96J92 1243 aa9□□□□□ -0.97
TDP1-214ENST00000556063 TTC14Q96N46 770 aa9□□□□□ -0.97
TDP1-214ENST00000556063 NEK1Q96PY6 1258 aa9□□□□□ -0.97
TDP1-214ENST00000556063 WDR18Q9BV38 432 aa9□□□□□ -0.97
TDP1-214ENST00000556063 NBPF3Q9H094 633 aa9□□□□□ -0.97
TDP1-214ENST00000556063 TCP11L1Q9NUJ3 509 aa9□□□□□ -0.97
TDP1-214ENST00000556063 ATAD5Q96QE3 1844 aa9□□□□□ -0.97
TDP1-214ENST00000556063 PLIN4Q96Q06 1357 aa8.99□□□□□ -0.97
TDP1-214ENST00000556063 OTOFQ9HC10 1997 aa8.99□□□□□ -0.97
TDP1-214ENST00000556063 MANSC4A6NHS7 340 aaPredicted RBP8.99□□□□□ -0.97
TDP1-214ENST00000556063 TTLL1O95922 423 aa8.99□□□□□ -0.97
TDP1-214ENST00000556063 SLC10A3P09131 477 aa8.99□□□□□ -0.97
TDP1-214ENST00000556063 GTF2A2P52657 109 aa8.99□□□□□ -0.97
TDP1-214ENST00000556063 USP14P54578 494 aa8.99□□□□□ -0.97
TDP1-214ENST00000556063 INHBEP58166 350 aa8.99□□□□□ -0.97
TDP1-214ENST00000556063 ATP2B2Q01814 1243 aa8.99□□□□□ -0.97
TDP1-214ENST00000556063 SPP2Q13103 211 aa8.99□□□□□ -0.97
TDP1-214ENST00000556063 GRM1Q13255 1194 aa8.99□□□□□ -0.97
TDP1-214ENST00000556063 RRP1BQ14684 758 aaKnown RBP8.99□□□□□ -0.97
TDP1-214ENST00000556063 FAM47AQ5JRC9 791 aa8.99□□□□□ -0.97
TDP1-214ENST00000556063 BLOC1S2Q6QNY1 142 aa8.99□□□□□ -0.97
TDP1-214ENST00000556063 FASTKD5Q7L8L6 764 aaKnown RBP8.99□□□□□ -0.97
TDP1-214ENST00000556063 RASAL3Q86YV0 1011 aa8.99□□□□□ -0.97
TDP1-214ENST00000556063 CAPNS2Q96L46 248 aa8.99□□□□□ -0.97
TDP1-214ENST00000556063 MTA3Q9BTC8 594 aa8.99□□□□□ -0.97
TDP1-214ENST00000556063 BACH2Q9BYV9 841 aa8.99□□□□□ -0.97
TDP1-214ENST00000556063 INCENPQ9NQS7 918 aa8.99□□□□□ -0.97
TDP1-214ENST00000556063 TMOD4Q9NZQ9 345 aa8.99□□□□□ -0.97
TDP1-214ENST00000556063 ZSWIM5Q9P217 1185 aa8.99□□□□□ -0.97
TDP1-214ENST00000556063 NYAP2Q9P242 653 aa8.99□□□□□ -0.97
TDP1-214ENST00000556063 SYNPO2Q9UMS6 1093 aa8.99□□□□□ -0.97
TDP1-214ENST00000556063 NEDD4P46934 1319 aa8.99□□□□□ -0.97
TDP1-214ENST00000556063 TRIM75PA6NK02 468 aa8.98□□□□□ -0.97
TDP1-214ENST00000556063 USP17L10C9JJH3 530 aa8.98□□□□□ -0.97
TDP1-214ENST00000556063 IRF6O14896 467 aa8.98□□□□□ -0.97
TDP1-214ENST00000556063 SEC24BO95487 1268 aa8.98□□□□□ -0.97
TDP1-214ENST00000556063 TOP1P11387 765 aaKnown RBP8.98□□□□□ -0.97
TDP1-214ENST00000556063 CETPP11597 493 aa8.98□□□□□ -0.97
TDP1-214ENST00000556063 EEF2P13639 858 aaKnown RBP8.98□□□□□ -0.97
TDP1-214ENST00000556063 MAP2K2P36507 400 aa8.98□□□□□ -0.97
TDP1-214ENST00000556063 BACE1P56817 501 aa8.98□□□□□ -0.97
TDP1-214ENST00000556063 FGD1P98174 961 aa8.98□□□□□ -0.97
TDP1-214ENST00000556063 SREBF2Q12772 1141 aa8.98□□□□□ -0.97
TDP1-214ENST00000556063 OTUD7BQ6GQQ9 843 aa8.98□□□□□ -0.97
TDP1-214ENST00000556063 CYP4F22Q6NT55 531 aa8.98□□□□□ -0.97
TDP1-214ENST00000556063 USP17L2Q6R6M4 530 aa8.98□□□□□ -0.97
TDP1-214ENST00000556063 DHX32Q7L7V1 743 aaKnown RBP8.98□□□□□ -0.97
TDP1-214ENST00000556063 DGKHQ86XP1 1220 aa8.98□□□□□ -0.97
TDP1-214ENST00000556063 RASEFQ8IZ41 740 aa8.98□□□□□ -0.97
TDP1-214ENST00000556063 TMTC2Q8N394 836 aa8.98□□□□□ -0.97
TDP1-214ENST00000556063 CEP95Q96GE4 821 aa8.98□□□□□ -0.97
TDP1-214ENST00000556063 TMEM87BQ96K49 555 aa8.98□□□□□ -0.97
TDP1-214ENST00000556063 JAKMIP1Q96N16 626 aaKnown RBP8.98□□□□□ -0.97
TDP1-214ENST00000556063 ZSCAN10Q96SZ4 725 aaPredicted RBP8.98□□□□□ -0.97
TDP1-214ENST00000556063 C22orf23Q9BZE7 217 aa8.98□□□□□ -0.97
TDP1-214ENST00000556063 TM6SF1Q9BZW5 370 aa8.98□□□□□ -0.97
TDP1-214ENST00000556063 KIAA1683Q9H0B3 1180 aa8.98□□□□□ -0.97
TDP1-214ENST00000556063 GOPCQ9HD26 462 aa8.98□□□□□ -0.97
TDP1-214ENST00000556063 MTMR4Q9NYA4 1195 aa8.98□□□□□ -0.97
TDP1-214ENST00000556063 STX8Q9UNK0 236 aa8.98□□□□□ -0.97
TDP1-214ENST00000556063 KCNH4Q9UQ05 1017 aa8.98□□□□□ -0.97
TDP1-214ENST00000556063 TMX2Q9Y320 296 aa8.98□□□□□ -0.97
TDP1-214ENST00000556063 AFG3L2Q9Y4W6 797 aa8.98□□□□□ -0.97
TDP1-214ENST00000556063 SNX14Q9Y5W7 946 aa8.98□□□□□ -0.97
TDP1-214ENST00000556063 WDR19Q8NEZ3 1342 aa8.98□□□□□ -0.97
TDP1-214ENST00000556063 IGKV6D-41A0A0C4DH26 115 aa8.97□□□□□ -0.97
TDP1-214ENST00000556063 IFIT3O14879 490 aaKnown RBP8.97□□□□□ -0.97
TDP1-214ENST00000556063 GUCY1A2P33402 732 aa8.97□□□□□ -0.97
TDP1-214ENST00000556063 JAG1P78504 1218 aa8.97□□□□□ -0.97
TDP1-214ENST00000556063 PABPC4Q13310 644 aaKnown RBP eCLIP8.97□□□□□ -0.97
TDP1-214ENST00000556063 STOX1Q6ZVD7 989 aa8.97□□□□□ -0.97
TDP1-214ENST00000556063 MB21D2Q8IYB1 491 aaPredicted RBP8.97□□□□□ -0.97
TDP1-214ENST00000556063 IL27Q8NEV9 243 aa8.97□□□□□ -0.97
TDP1-214ENST00000556063 LPAR1Q92633 364 aa8.97□□□□□ -0.97
TDP1-214ENST00000556063 MKL1Q969V6 931 aa8.97□□□□□ -0.97
TDP1-214ENST00000556063 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.97□□□□□ -0.97
TDP1-214ENST00000556063 CLIP2Q9UDT6 1046 aa8.97□□□□□ -0.97
TDP1-214ENST00000556063 CYP46A1Q9Y6A2 500 aa8.97□□□□□ -0.97
TDP1-214ENST00000556063 TACC3Q9Y6A5 838 aa8.97□□□□□ -0.97
TDP1-214ENST00000556063 WDR33Q9C0J8 1336 aaKnown RBP8.97□□□□□ -0.97
TDP1-214ENST00000556063 GREB1LQ9C091 1923 aaPredicted RBP8.96□□□□□ -0.97
TDP1-214ENST00000556063 MYH4Q9Y623 1939 aa8.96□□□□□ -0.97
TDP1-214ENST00000556063 CCL15-CCL14A0A0B4J2E2 113 aa8.96□□□□□ -0.98
TDP1-214ENST00000556063 A0A0G2JLL6 359 aaPredicted RBP8.96□□□□□ -0.98
TDP1-214ENST00000556063 FAM155AB1AL88 458 aaPredicted RBP8.96□□□□□ -0.98
TDP1-214ENST00000556063 PRC1O43663 620 aa8.96□□□□□ -0.98
TDP1-214ENST00000556063 RAD21O60216 631 aa8.96□□□□□ -0.98
TDP1-214ENST00000556063 CASTP20810 708 aaKnown RBP8.96□□□□□ -0.98
TDP1-214ENST00000556063 VEGFBP49765 207 aa8.96□□□□□ -0.98
TDP1-214ENST00000556063 HTRA3P83110 453 aa8.96□□□□□ -0.98
TDP1-214ENST00000556063 MKRN3Q13064 507 aaKnown RBP8.96□□□□□ -0.98
TDP1-214ENST00000556063 MTMR2Q13614 643 aa8.96□□□□□ -0.98
TDP1-214ENST00000556063 WTAPQ15007 396 aa8.96□□□□□ -0.98
TDP1-214ENST00000556063 CCL15Q16663 113 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms