RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 SEPT2Q15019 361 aa14.66□□□□□ -0.06
SHMT2-221ENST00000555773 RAB3GAP1Q15042 981 aa14.66□□□□□ -0.06
SHMT2-221ENST00000555773 MOB2Q70IA6 237 aa14.66□□□□□ -0.06
SHMT2-221ENST00000555773 NKX2-3Q8TAU0 364 aa14.66□□□□□ -0.06
SHMT2-221ENST00000555773 MKL1Q969V6 931 aa14.66□□□□□ -0.06
SHMT2-221ENST00000555773 WDR18Q9BV38 432 aa14.66□□□□□ -0.06
SHMT2-221ENST00000555773 AS3MTQ9HBK9 375 aa14.66□□□□□ -0.06
SHMT2-221ENST00000555773 PDRG1Q9NUG6 133 aa14.66□□□□□ -0.06
SHMT2-221ENST00000555773 SYNPO2Q9UMS6 1093 aa14.66□□□□□ -0.06
SHMT2-221ENST00000555773 FGD1P98174 961 aa14.65□□□□□ -0.06
SHMT2-221ENST00000555773 PPATQ06203 517 aa14.65□□□□□ -0.06
SHMT2-221ENST00000555773 ANKRD1Q15327 319 aa14.65□□□□□ -0.06
SHMT2-221ENST00000555773 TMEM67Q5HYA8 995 aa14.65□□□□□ -0.06
SHMT2-221ENST00000555773 CHST3Q7LGC8 479 aa14.65□□□□□ -0.06
SHMT2-221ENST00000555773 ERO1BQ86YB8 467 aa14.65□□□□□ -0.06
SHMT2-221ENST00000555773 CEP95Q96GE4 821 aa14.65□□□□□ -0.06
SHMT2-221ENST00000555773 UPF3BQ9BZI7 483 aaKnown RBP14.65□□□□□ -0.06
SHMT2-221ENST00000555773 SNCAIPQ9Y6H5 919 aa14.65□□□□□ -0.06
SHMT2-221ENST00000555773 TNKSO95271 1327 aa14.65□□□□□ -0.06
SHMT2-221ENST00000555773 NMT2O60551 498 aa14.64□□□□□ -0.07
SHMT2-221ENST00000555773 CPA1P15085 419 aa14.64□□□□□ -0.07
SHMT2-221ENST00000555773 HUNKP57058 714 aa14.64□□□□□ -0.07
SHMT2-221ENST00000555773 ICA1Q05084 483 aa14.64□□□□□ -0.07
SHMT2-221ENST00000555773 WTAPQ15007 396 aa14.64□□□□□ -0.07
SHMT2-221ENST00000555773 SEC23AQ15436 765 aa14.64□□□□□ -0.07
SHMT2-221ENST00000555773 SAPCD2Q86UD0 394 aa14.64□□□□□ -0.07
SHMT2-221ENST00000555773 SIAH1Q8IUQ4 282 aa14.64□□□□□ -0.07
SHMT2-221ENST00000555773 ENAHQ8N8S7 591 aaPredicted RBP14.64□□□□□ -0.07
SHMT2-221ENST00000555773 HHIPL1Q96JK4 782 aa14.64□□□□□ -0.07
SHMT2-221ENST00000555773 ZKSCAN3Q9BRR0 538 aa14.64□□□□□ -0.07
SHMT2-221ENST00000555773 AGXT2Q9BYV1 514 aa14.64□□□□□ -0.07
SHMT2-221ENST00000555773 SH2D4AQ9H788 454 aa14.64□□□□□ -0.07
SHMT2-221ENST00000555773 ARHGEF10LQ9HCE6 1279 aa14.64□□□□□ -0.07
SHMT2-221ENST00000555773 CLIP2Q9UDT6 1046 aa14.64□□□□□ -0.07
SHMT2-221ENST00000555773 STX8Q9UNK0 236 aa14.64□□□□□ -0.07
SHMT2-221ENST00000555773 TLL2Q9Y6L7 1015 aa14.64□□□□□ -0.07
SHMT2-221ENST00000555773 ZHX2Q9Y6X8 837 aa14.64□□□□□ -0.07
SHMT2-221ENST00000555773 SPDYE5A6NIY4 337 aa14.63□□□□□ -0.07
SHMT2-221ENST00000555773 SH2B2O14492 632 aaPredicted RBP14.63□□□□□ -0.07
SHMT2-221ENST00000555773 ST18O60284 1047 aa14.63□□□□□ -0.07
SHMT2-221ENST00000555773 TOP1P11387 765 aaKnown RBP14.63□□□□□ -0.07
SHMT2-221ENST00000555773 EEF2P13639 858 aaKnown RBP14.63□□□□□ -0.07
SHMT2-221ENST00000555773 APLP1P51693 650 aa14.63□□□□□ -0.07
SHMT2-221ENST00000555773 COL9A3Q14050 684 aaPredicted RBP14.63□□□□□ -0.07
SHMT2-221ENST00000555773 SHROOM1Q2M3G4 852 aaPredicted RBP14.63□□□□□ -0.07
SHMT2-221ENST00000555773 IFIT1BQ5T764 474 aaKnown RBP14.63□□□□□ -0.07
SHMT2-221ENST00000555773 RCSD1Q6JBY9 416 aa14.63□□□□□ -0.07
SHMT2-221ENST00000555773 Q6ZUG5 572 aa14.63□□□□□ -0.07
SHMT2-221ENST00000555773 ZNF280CQ8ND82 737 aa14.63□□□□□ -0.07
SHMT2-221ENST00000555773 CLMNQ96JQ2 1002 aa14.63□□□□□ -0.07
SHMT2-221ENST00000555773 ELP3Q9H9T3 547 aa14.63□□□□□ -0.07
SHMT2-221ENST00000555773 SIPA1L1O43166 1804 aa14.62□□□□□ -0.07
SHMT2-221ENST00000555773 C19orf81C9J6K1 198 aa14.62□□□□□ -0.07
SHMT2-221ENST00000555773 USP17L10C9JJH3 530 aa14.62□□□□□ -0.07
SHMT2-221ENST00000555773 CXCL11O14625 94 aa14.62□□□□□ -0.07
SHMT2-221ENST00000555773 EVCP57679 992 aa14.62□□□□□ -0.07
SHMT2-221ENST00000555773 SGMS1Q86VZ5 419 aa14.62□□□□□ -0.07
SHMT2-221ENST00000555773 TCEANC2Q96MN5 208 aa14.62□□□□□ -0.07
SHMT2-221ENST00000555773 TMEM47Q9BQJ4 181 aa14.62□□□□□ -0.07
SHMT2-221ENST00000555773 LRRC2Q9BYS8 371 aa14.62□□□□□ -0.07
SHMT2-221ENST00000555773 KAT14Q9H8E8 782 aa14.62□□□□□ -0.07
SHMT2-221ENST00000555773 LY9Q9HBG7 655 aa14.62□□□□□ -0.07
SHMT2-221ENST00000555773 TMX2Q9Y320 296 aa14.62□□□□□ -0.07
SHMT2-221ENST00000555773 AFG3L2Q9Y4W6 797 aa14.62□□□□□ -0.07
SHMT2-221ENST00000555773 CCDC69A6NI79 296 aa14.61□□□□□ -0.07
SHMT2-221ENST00000555773 MCM2P49736 904 aa14.61□□□□□ -0.07
SHMT2-221ENST00000555773 USP14P54578 494 aa14.61□□□□□ -0.07
SHMT2-221ENST00000555773 ATP2B2Q01814 1243 aa14.61□□□□□ -0.07
SHMT2-221ENST00000555773 SPP2Q13103 211 aa14.61□□□□□ -0.07
SHMT2-221ENST00000555773 PPIL2Q13356 520 aa14.61□□□□□ -0.07
SHMT2-221ENST00000555773 RGMBQ6NW40 437 aa14.61□□□□□ -0.07
SHMT2-221ENST00000555773 SYNE3Q6ZMZ3 975 aa14.61□□□□□ -0.07
SHMT2-221ENST00000555773 NFXL1Q6ZNB6 911 aa14.61□□□□□ -0.07
SHMT2-221ENST00000555773 CATIPQ7Z7H3 387 aa14.61□□□□□ -0.07
SHMT2-221ENST00000555773 BRF1Q92994 677 aa14.61□□□□□ -0.07
SHMT2-221ENST00000555773 KIAA1683Q9H0B3 1180 aa14.61□□□□□ -0.07
SHMT2-221ENST00000555773 CREBZFQ9NS37 354 aa14.61□□□□□ -0.07
SHMT2-221ENST00000555773 ABT1Q9ULW3 272 aaKnown RBP14.61□□□□□ -0.07
SHMT2-221ENST00000555773 LAMB1P07942 1786 aa14.6□□□□□ -0.07
SHMT2-221ENST00000555773 PAPPA2Q9BXP8 1791 aa14.6□□□□□ -0.07
SHMT2-221ENST00000555773 LAMA4Q16363 1823 aa14.6□□□□□ -0.07
SHMT2-221ENST00000555773 A0A1W2PRG0 241 aa14.6□□□□□ -0.07
SHMT2-221ENST00000555773 CALM1P0DP23 149 aa14.6□□□□□ -0.07
SHMT2-221ENST00000555773 CALM2P0DP24 149 aa14.6□□□□□ -0.07
SHMT2-221ENST00000555773 CALM3P0DP25 149 aa14.6□□□□□ -0.07
SHMT2-221ENST00000555773 ZBTB48P10074 688 aaPredicted RBP14.6□□□□□ -0.07
SHMT2-221ENST00000555773 ZNF157P51786 506 aaPredicted RBP14.6□□□□□ -0.07
SHMT2-221ENST00000555773 BACE1P56817 501 aa14.6□□□□□ -0.07
SHMT2-221ENST00000555773 TOB2Q14106 344 aaPredicted RBP14.6□□□□□ -0.07
SHMT2-221ENST00000555773 GMCL1P1Q8NEA9 526 aa14.6□□□□□ -0.07
SHMT2-221ENST00000555773 ACER1Q8TDN7 264 aa14.6□□□□□ -0.07
SHMT2-221ENST00000555773 CCDC102AQ96A19 550 aa14.6□□□□□ -0.07
SHMT2-221ENST00000555773 OPTNQ96CV9 577 aa14.6□□□□□ -0.07
SHMT2-221ENST00000555773 GOPCQ9HD26 462 aa14.6□□□□□ -0.07
SHMT2-221ENST00000555773 GPHNQ9NQX3 736 aaPredicted RBP14.6□□□□□ -0.07
SHMT2-221ENST00000555773 KCNH4Q9UQ05 1017 aa14.6□□□□□ -0.07
SHMT2-221ENST00000555773 SLC12A7Q9Y666 1083 aa14.6□□□□□ -0.07
SHMT2-221ENST00000555773 F5H6K3 240 aa14.59□□□□□ -0.07
SHMT2-221ENST00000555773 IRF6O14896 467 aa14.59□□□□□ -0.07
SHMT2-221ENST00000555773 ECE1P42892 770 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms