RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 MORF4L1Q9UBU8 362 aa29.4■■■□□ 2.3
PRKCH-216ENST00000555542 CCL5P13501 91 aa29.39■■■□□ 2.3
PRKCH-216ENST00000555542 IRF5Q13568 498 aa29.39■■■□□ 2.3
PRKCH-216ENST00000555542 PRPF38BQ5VTL8 546 aaKnown RBP29.39■■■□□ 2.3
PRKCH-216ENST00000555542 GPRC5AQ8NFJ5 357 aa29.39■■■□□ 2.3
PRKCH-216ENST00000555542 GTF3C2Q8WUA4 911 aaPredicted RBP29.39■■■□□ 2.3
PRKCH-216ENST00000555542 C12orf42Q96LP6 360 aa29.39■■■□□ 2.3
PRKCH-216ENST00000555542 PAGR1Q9BTK6 254 aa29.39■■■□□ 2.3
PRKCH-216ENST00000555542 RNF208Q9H0X6 261 aa29.39■■■□□ 2.3
PRKCH-216ENST00000555542 TTC41PQ6P2S7 1318 aa29.39■■■□□ 2.3
PRKCH-216ENST00000555542 USP17L15C9J2P7 530 aa29.38■■■□□ 2.29
PRKCH-216ENST00000555542 USP17L13C9JLJ4 530 aa29.38■■■□□ 2.29
PRKCH-216ENST00000555542 USP17L12C9JPN9 530 aa29.38■■■□□ 2.29
PRKCH-216ENST00000555542 USP17L11C9JVI0 530 aa29.38■■■□□ 2.29
PRKCH-216ENST00000555542 USP17L21D6R901 530 aa29.38■■■□□ 2.29
PRKCH-216ENST00000555542 USP17L18D6R9N7 530 aa29.38■■■□□ 2.29
PRKCH-216ENST00000555542 USP17L22D6RA61 530 aa29.38■■■□□ 2.29
PRKCH-216ENST00000555542 USP17L17D6RBQ6 530 aa29.38■■■□□ 2.29
PRKCH-216ENST00000555542 USP17L19D6RCP7 530 aa29.38■■■□□ 2.29
PRKCH-216ENST00000555542 USP17L20D6RJB6 530 aa29.38■■■□□ 2.29
PRKCH-216ENST00000555542 USP17L24Q0WX57 530 aa29.38■■■□□ 2.29
PRKCH-216ENST00000555542 DOCK3Q8IZD9 2030 aa29.37■■■□□ 2.29
PRKCH-216ENST00000555542 CYP2D7A0A087X1C5 515 aa29.37■■■□□ 2.29
PRKCH-216ENST00000555542 GUCY1A2P33402 732 aa29.37■■■□□ 2.29
PRKCH-216ENST00000555542 LRRFIP1Q32MZ4 808 aaKnown RBP29.37■■■□□ 2.29
PRKCH-216ENST00000555542 TMEM179Q6ZVK1 233 aa29.37■■■□□ 2.29
PRKCH-216ENST00000555542 NKX2-3Q8TAU0 364 aa29.37■■■□□ 2.29
PRKCH-216ENST00000555542 PXYLP1Q8TE99 480 aa29.37■■■□□ 2.29
PRKCH-216ENST00000555542 PEX10O60683 326 aa29.36■■■□□ 2.29
PRKCH-216ENST00000555542 INHAP05111 366 aa29.36■■■□□ 2.29
PRKCH-216ENST00000555542 ZFYP08048 801 aaPredicted RBP29.36■■■□□ 2.29
PRKCH-216ENST00000555542 VCAM1P19320 739 aa29.36■■■□□ 2.29
PRKCH-216ENST00000555542 C12orf60Q5U649 245 aa29.36■■■□□ 2.29
PRKCH-216ENST00000555542 APPBP2Q92624 585 aa29.36■■■□□ 2.29
PRKCH-216ENST00000555542 CWC22Q9HCG8 908 aaKnown RBP29.36■■■□□ 2.29
PRKCH-216ENST00000555542 TXNRD2Q9NNW7 524 aa29.36■■■□□ 2.29
PRKCH-216ENST00000555542 RNF113AO15541 343 aaKnown RBP29.35■■■□□ 2.29
PRKCH-216ENST00000555542 ARPP21Q9UBL0 812 aaPredicted RBP29.35■■■□□ 2.29
PRKCH-216ENST00000555542 BRCA2P51587 3418 aa29.35■■■□□ 2.29
PRKCH-216ENST00000555542 GLRX3O76003 335 aaKnown RBP29.34■■■□□ 2.29
PRKCH-216ENST00000555542 CDK8P49336 464 aa29.34■■■□□ 2.29
PRKCH-216ENST00000555542 ERVK-9P63128 1117 aa29.34■■■□□ 2.29
PRKCH-216ENST00000555542 ERVK-24P63145 666 aa29.34■■■□□ 2.29
PRKCH-216ENST00000555542 OTUD7AQ8TE49 926 aaPredicted RBP29.34■■■□□ 2.29
PRKCH-216ENST00000555542 STRBPQ96SI9 672 aaKnown RBP29.34■■■□□ 2.29
PRKCH-216ENST00000555542 UNC93B1Q9H1C4 597 aa29.34■■■□□ 2.29
PRKCH-216ENST00000555542 RPAP3Q9H6T3 665 aaPredicted RBP29.34■■■□□ 2.29
PRKCH-216ENST00000555542 RBPJLQ9UBG7 517 aa29.34■■■□□ 2.29
PRKCH-216ENST00000555542 AKR1B1P15121 316 aa29.33■■■□□ 2.29
PRKCH-216ENST00000555542 MX1P20591 662 aa29.33■■■□□ 2.29
PRKCH-216ENST00000555542 ANKRD45Q5TZF3 282 aa29.33■■■□□ 2.29
PRKCH-216ENST00000555542 CTR9Q6PD62 1173 aa29.33■■■□□ 2.29
PRKCH-216ENST00000555542 CATSPERGQ6ZRH7 1159 aa29.33■■■□□ 2.29
PRKCH-216ENST00000555542 CCDC17Q96LX7 622 aa29.33■■■□□ 2.29
PRKCH-216ENST00000555542 ARHGEF10LQ9HCE6 1279 aa29.33■■■□□ 2.29
PRKCH-216ENST00000555542 GJB1P08034 283 aa29.32■■■□□ 2.28
PRKCH-216ENST00000555542 MAPK4P31152 587 aa29.32■■■□□ 2.28
PRKCH-216ENST00000555542 C16orf86Q6ZW13 317 aa29.32■■■□□ 2.28
PRKCH-216ENST00000555542 OSBP2Q969R2 916 aa29.32■■■□□ 2.28
PRKCH-216ENST00000555542 FSD1Q9BTV5 496 aa29.32■■■□□ 2.28
PRKCH-216ENST00000555542 SMIM22K7EJ46 135 aa29.31■■■□□ 2.28
PRKCH-216ENST00000555542 ICA1Q05084 483 aa29.31■■■□□ 2.28
PRKCH-216ENST00000555542 PI4K2BQ8TCG2 481 aa29.31■■■□□ 2.28
PRKCH-216ENST00000555542 GCC1Q96CN9 775 aa29.31■■■□□ 2.28
PRKCH-216ENST00000555542 SH2D4AQ9H788 454 aa29.31■■■□□ 2.28
PRKCH-216ENST00000555542 A0A1W2PRG0 241 aa29.3■■■□□ 2.28
PRKCH-216ENST00000555542 GPAA1O43292 621 aa29.3■■■□□ 2.28
PRKCH-216ENST00000555542 APPP05067 770 aa29.3■■■□□ 2.28
PRKCH-216ENST00000555542 GJA8P48165 433 aa29.3■■■□□ 2.28
PRKCH-216ENST00000555542 Q3C1V9 767 aa29.3■■■□□ 2.28
PRKCH-216ENST00000555542 SOCS4Q8WXH5 440 aa29.3■■■□□ 2.28
PRKCH-216ENST00000555542 NUDT12Q9BQG2 462 aa29.3■■■□□ 2.28
PRKCH-216ENST00000555542 TANGO6Q9C0B7 1094 aa29.3■■■□□ 2.28
PRKCH-216ENST00000555542 RABGAP1Q9Y3P9 1069 aa29.3■■■□□ 2.28
PRKCH-216ENST00000555542 GNAT2P19087 354 aa29.29■■■□□ 2.28
PRKCH-216ENST00000555542 CYP2B6P20813 491 aa29.29■■■□□ 2.28
PRKCH-216ENST00000555542 TDO2P48775 406 aa29.29■■■□□ 2.28
PRKCH-216ENST00000555542 CCNA1P78396 465 aa29.29■■■□□ 2.28
PRKCH-216ENST00000555542 ATP2B2Q01814 1243 aa29.29■■■□□ 2.28
PRKCH-216ENST00000555542 WDR78Q5VTH9 848 aa29.29■■■□□ 2.28
PRKCH-216ENST00000555542 CLEC10AQ8IUN9 316 aa29.29■■■□□ 2.28
PRKCH-216ENST00000555542 STK11IPQ8N1F8 1099 aa29.29■■■□□ 2.28
PRKCH-216ENST00000555542 SHISA4Q96DD7 197 aa29.29■■■□□ 2.28
PRKCH-216ENST00000555542 GJD2Q9UKL4 321 aa29.29■■■□□ 2.28
PRKCH-216ENST00000555542 MINDY4BA8MYZ0 360 aa29.28■■■□□ 2.28
PRKCH-216ENST00000555542 HMGCRP04035 888 aa29.28■■■□□ 2.28
PRKCH-216ENST00000555542 HDAC1Q13547 482 aaPredicted RBP29.28■■■□□ 2.28
PRKCH-216ENST00000555542 GIMAP6Q6P9H5 292 aa29.28■■■□□ 2.28
PRKCH-216ENST00000555542 U2AF1L4Q8WU68 220 aaKnown RBP29.28■■■□□ 2.28
PRKCH-216ENST00000555542 PORCNQ9H237 461 aa29.28■■■□□ 2.28
PRKCH-216ENST00000555542 GSG1L2A8MUP6 293 aa29.27■■■□□ 2.28
PRKCH-216ENST00000555542 M0R2C6 588 aa29.27■■■□□ 2.28
PRKCH-216ENST00000555542 GPR142Q7Z601 462 aa29.27■■■□□ 2.28
PRKCH-216ENST00000555542 PLXNB2O15031 1838 aa29.27■■■□□ 2.28
PRKCH-216ENST00000555542 PLEKHH3Q7Z736 793 aa29.26■■■□□ 2.27
PRKCH-216ENST00000555542 DEFB118Q96PH6 123 aa29.26■■■□□ 2.27
PRKCH-216ENST00000555542 MKNK2Q9HBH9 465 aa29.26■■■□□ 2.27
PRKCH-216ENST00000555542 SPDYE16A6NNV3 312 aaPredicted RBP29.25■■■□□ 2.27
PRKCH-216ENST00000555542 AAMPQ13685 434 aa29.25■■■□□ 2.27
PRKCH-216ENST00000555542 SBK1Q52WX2 424 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms