RNA–Protein interactions for RNA: ENST00000555451.1

XRCC3-213, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 409 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-213ENST00000555451 TRIM34Q9BYJ4 488 aa13□□□□□ -0.33
XRCC3-213ENST00000555451 GREB1LQ9C091 1923 aaPredicted RBP13□□□□□ -0.33
XRCC3-213ENST00000555451 CLRN2A0PK11 232 aa12.99□□□□□ -0.33
XRCC3-213ENST00000555451 DDTLA6NHG4 134 aaPredicted RBP12.99□□□□□ -0.33
XRCC3-213ENST00000555451 H7C1D1 291 aa12.99□□□□□ -0.33
XRCC3-213ENST00000555451 WNT10BO00744 389 aa12.99□□□□□ -0.33
XRCC3-213ENST00000555451 TNNI2P48788 182 aa12.99□□□□□ -0.33
XRCC3-213ENST00000555451 TNFAIP1Q13829 316 aa12.99□□□□□ -0.33
XRCC3-213ENST00000555451 PKP1Q13835 747 aa12.99□□□□□ -0.33
XRCC3-213ENST00000555451 EAPPQ56P03 285 aaPredicted RBP12.99□□□□□ -0.33
XRCC3-213ENST00000555451 PPP4R3BQ5MIZ7 849 aa12.99□□□□□ -0.33
XRCC3-213ENST00000555451 LARP1BQ659C4 914 aaKnown RBP12.99□□□□□ -0.33
XRCC3-213ENST00000555451 SH3BP5LQ7L8J4 393 aa12.99□□□□□ -0.33
XRCC3-213ENST00000555451 METTL16Q86W50 562 aaKnown RBP12.99□□□□□ -0.33
XRCC3-213ENST00000555451 RAB11FIP4Q86YS3 637 aa12.99□□□□□ -0.33
XRCC3-213ENST00000555451 ZFPM1Q8IX07 1006 aa12.99□□□□□ -0.33
XRCC3-213ENST00000555451 MICALL2Q8IY33 904 aa12.99□□□□□ -0.33
XRCC3-213ENST00000555451 RGS22Q8NE09 1264 aa12.99□□□□□ -0.33
XRCC3-213ENST00000555451 KAT14Q9H8E8 782 aa12.99□□□□□ -0.33
XRCC3-213ENST00000555451 IL17RBQ9NRM6 502 aa12.99□□□□□ -0.33
XRCC3-213ENST00000555451 RBM28Q9NW13 759 aaKnown RBP12.99□□□□□ -0.33
XRCC3-213ENST00000555451 ZDHHC9Q9Y397 364 aa12.99□□□□□ -0.33
XRCC3-213ENST00000555451 STK36Q9NRP7 1315 aa12.98□□□□□ -0.33
XRCC3-213ENST00000555451 SHTN1A0MZ66 631 aa12.98□□□□□ -0.33
XRCC3-213ENST00000555451 TCP10L2B9ZVM9 353 aa12.98□□□□□ -0.33
XRCC3-213ENST00000555451 NMT2O60551 498 aa12.98□□□□□ -0.33
XRCC3-213ENST00000555451 ZSCAN22P10073 491 aaPredicted RBP12.98□□□□□ -0.33
XRCC3-213ENST00000555451 RXRAP19793 462 aa12.98□□□□□ -0.33
XRCC3-213ENST00000555451 CDC27P30260 824 aa12.98□□□□□ -0.33
XRCC3-213ENST00000555451 SHMT1P34896 483 aa12.98□□□□□ -0.33
XRCC3-213ENST00000555451 NFKBIBQ15653 356 aa12.98□□□□□ -0.33
XRCC3-213ENST00000555451 RCSD1Q6JBY9 416 aa12.98□□□□□ -0.33
XRCC3-213ENST00000555451 FANCBQ8NB91 859 aa12.98□□□□□ -0.33
XRCC3-213ENST00000555451 CTCFLQ8NI51 663 aaPredicted RBP12.98□□□□□ -0.33
XRCC3-213ENST00000555451 NUP133Q8WUM0 1156 aa12.98□□□□□ -0.33
XRCC3-213ENST00000555451 DDX11Q96FC9 970 aa12.98□□□□□ -0.33
XRCC3-213ENST00000555451 MAP3K14Q99558 947 aa12.98□□□□□ -0.33
XRCC3-213ENST00000555451 MYL10Q9BUA6 226 aa12.98□□□□□ -0.33
XRCC3-213ENST00000555451 VEZTQ9HBM0 779 aa12.98□□□□□ -0.33
XRCC3-213ENST00000555451 FAM217BQ9NTX9 383 aaPredicted RBP12.98□□□□□ -0.33
XRCC3-213ENST00000555451 PGAP2Q9UHJ9 254 aa12.98□□□□□ -0.33
XRCC3-213ENST00000555451 HERC5Q9UII4 1024 aaKnown RBP12.98□□□□□ -0.33
XRCC3-213ENST00000555451 CNTNAP1P78357 1384 aa12.97□□□□□ -0.33
XRCC3-213ENST00000555451 IFNAR1P17181 557 aa12.97□□□□□ -0.33
XRCC3-213ENST00000555451 ADD1P35611 737 aaKnown RBP12.97□□□□□ -0.33
XRCC3-213ENST00000555451 NOVP48745 357 aa12.97□□□□□ -0.33
XRCC3-213ENST00000555451 HIRAP54198 1017 aaPredicted RBP12.97□□□□□ -0.33
XRCC3-213ENST00000555451 TROAPQ12815 778 aa12.97□□□□□ -0.33
XRCC3-213ENST00000555451 NTRK3Q16288 839 aa12.97□□□□□ -0.33
XRCC3-213ENST00000555451 KIF4BQ2VIQ3 1234 aa12.97□□□□□ -0.33
XRCC3-213ENST00000555451 NBPF9Q3BBW0 867 aa12.97□□□□□ -0.33
XRCC3-213ENST00000555451 TATDN1Q6P1N9 297 aa12.97□□□□□ -0.33
XRCC3-213ENST00000555451 CCDC144CPQ8IYA2 1237 aa12.97□□□□□ -0.33
XRCC3-213ENST00000555451 ZC3H15Q8WU90 426 aaKnown RBP12.97□□□□□ -0.33
XRCC3-213ENST00000555451 CSRNP1Q96S65 589 aa12.97□□□□□ -0.33
XRCC3-213ENST00000555451 DNAJC18Q9H819 358 aa12.97□□□□□ -0.33
XRCC3-213ENST00000555451 ORC3Q9UBD5 711 aaPredicted RBP12.97□□□□□ -0.33
XRCC3-213ENST00000555451 MTMR6Q9Y217 621 aa12.97□□□□□ -0.33
XRCC3-213ENST00000555451 CLEC11AQ9Y240 323 aa12.97□□□□□ -0.33
XRCC3-213ENST00000555451 ATP6V1DQ9Y5K8 247 aa12.97□□□□□ -0.33
XRCC3-213ENST00000555451 IGKV6D-41A0A0C4DH26 115 aa12.96□□□□□ -0.33
XRCC3-213ENST00000555451 VPS37CA5D8V6 355 aaPredicted RBP12.96□□□□□ -0.33
XRCC3-213ENST00000555451 DDX11L8A8MPP1 907 aa12.96□□□□□ -0.33
XRCC3-213ENST00000555451 ITGBL1O95965 494 aaPredicted RBP12.96□□□□□ -0.33
XRCC3-213ENST00000555451 F13A1P00488 732 aa12.96□□□□□ -0.33
XRCC3-213ENST00000555451 TOP1P11387 765 aaKnown RBP12.96□□□□□ -0.33
XRCC3-213ENST00000555451 AKR1B1P15121 316 aa12.96□□□□□ -0.33
XRCC3-213ENST00000555451 KIF5BP33176 963 aa12.96□□□□□ -0.33
XRCC3-213ENST00000555451 TRIM22Q8IYM9 498 aa12.96□□□□□ -0.33
XRCC3-213ENST00000555451 PNMA1Q8ND90 353 aa12.96□□□□□ -0.33
XRCC3-213ENST00000555451 TRPM4Q8TD43 1214 aa12.96□□□□□ -0.33
XRCC3-213ENST00000555451 WASF1Q92558 559 aa12.96□□□□□ -0.33
XRCC3-213ENST00000555451 STX8Q9UNK0 236 aa12.96□□□□□ -0.33
XRCC3-213ENST00000555451 PCNTO95613 3336 aa12.95□□□□□ -0.34
XRCC3-213ENST00000555451 PASKQ96RG2 1323 aa12.95□□□□□ -0.34
XRCC3-213ENST00000555451 GOLGA6L22H0YM25 854 aa12.95□□□□□ -0.34
XRCC3-213ENST00000555451 H3BQV1 296 aa12.95□□□□□ -0.34
XRCC3-213ENST00000555451 TBC1D12O60347 775 aa12.95□□□□□ -0.34
XRCC3-213ENST00000555451 BAG4O95429 457 aaKnown RBP12.95□□□□□ -0.34
XRCC3-213ENST00000555451 FMNL1O95466 1100 aaPredicted RBP12.95□□□□□ -0.34
XRCC3-213ENST00000555451 FDPSP14324 419 aaKnown RBP12.95□□□□□ -0.34
XRCC3-213ENST00000555451 PTMSP20962 102 aa12.95□□□□□ -0.34
XRCC3-213ENST00000555451 MCM4P33991 863 aa12.95□□□□□ -0.34
XRCC3-213ENST00000555451 SSRP1Q08945 709 aaKnown RBP12.95□□□□□ -0.34
XRCC3-213ENST00000555451 CERKLQ49MI3 558 aaPredicted RBP12.95□□□□□ -0.34
XRCC3-213ENST00000555451 RBM26Q5T8P6 1007 aaKnown RBP12.95□□□□□ -0.34
XRCC3-213ENST00000555451 SAMD7Q7Z3H4 446 aa12.95□□□□□ -0.34
XRCC3-213ENST00000555451 CEP95Q96GE4 821 aa12.95□□□□□ -0.34
XRCC3-213ENST00000555451 TMEM47Q9BQJ4 181 aa12.95□□□□□ -0.34
XRCC3-213ENST00000555451 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.95□□□□□ -0.34
XRCC3-213ENST00000555451 RNF26Q9BY78 433 aaPredicted RBP12.95□□□□□ -0.34
XRCC3-213ENST00000555451 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.95□□□□□ -0.34
XRCC3-213ENST00000555451 MTMR4Q9NYA4 1195 aa12.95□□□□□ -0.34
XRCC3-213ENST00000555451 MPHOSPH10O00566 681 aaKnown RBP12.94□□□□□ -0.34
XRCC3-213ENST00000555451 DTNBO60941 627 aa12.94□□□□□ -0.34
XRCC3-213ENST00000555451 TTLL1O95922 423 aa12.94□□□□□ -0.34
XRCC3-213ENST00000555451 EGFRP00533 1210 aa12.94□□□□□ -0.34
XRCC3-213ENST00000555451 GNAQP50148 359 aa12.94□□□□□ -0.34
XRCC3-213ENST00000555451 APLP1P51693 650 aa12.94□□□□□ -0.34
XRCC3-213ENST00000555451 GRM4Q14833 912 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms