RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 WNT10AQ9GZT5 417 aa8.85□□□□□ -0.99
VRK1-205ENST00000555402 FBXO24O75426 580 aa8.84□□□□□ -0.99
VRK1-205ENST00000555402 ZNF16P17020 682 aaPredicted RBP8.84□□□□□ -0.99
VRK1-205ENST00000555402 KIR3DL1P43629 444 aa8.84□□□□□ -0.99
VRK1-205ENST00000555402 TMC7Q7Z402 723 aa8.84□□□□□ -0.99
VRK1-205ENST00000555402 ADAMTS10Q9H324 1103 aa8.84□□□□□ -0.99
VRK1-205ENST00000555402 PTPN11Q06124 597 aaPredicted RBP8.83□□□□□ -1
VRK1-205ENST00000555402 HDXQ7Z353 690 aa8.83□□□□□ -1
VRK1-205ENST00000555402 PLPPR2Q96GM1 343 aa8.83□□□□□ -1
VRK1-205ENST00000555402 COX4I2Q96KJ9 171 aa8.83□□□□□ -1
VRK1-205ENST00000555402 PPM1HQ9ULR3 514 aa8.83□□□□□ -1
VRK1-205ENST00000555402 UNCXA6NJT0 531 aa8.82□□□□□ -1
VRK1-205ENST00000555402 CYP7A1P22680 504 aa8.82□□□□□ -1
VRK1-205ENST00000555402 HID1Q8IV36 788 aa8.82□□□□□ -1
VRK1-205ENST00000555402 PNMA6FA0A0J9YX94 578 aa8.81□□□□□ -1
VRK1-205ENST00000555402 BMP7P18075 431 aa8.81□□□□□ -1
VRK1-205ENST00000555402 TRHRP34981 398 aaPredicted RBP8.81□□□□□ -1
VRK1-205ENST00000555402 ETF1P62495 437 aaKnown RBP8.81□□□□□ -1
VRK1-205ENST00000555402 EAPPQ56P03 285 aaPredicted RBP8.81□□□□□ -1
VRK1-205ENST00000555402 BAHD1Q8TBE0 780 aaPredicted RBP8.81□□□□□ -1
VRK1-205ENST00000555402 MRRFQ96E11 262 aaKnown RBP8.81□□□□□ -1
VRK1-205ENST00000555402 RNF32Q9H0A6 362 aa8.81□□□□□ -1
VRK1-205ENST00000555402 ZCCHC4Q9H5U6 513 aa8.81□□□□□ -1
VRK1-205ENST00000555402 CST3P01034 146 aaPredicted RBP8.8□□□□□ -1
VRK1-205ENST00000555402 DSC3Q14574 896 aa8.8□□□□□ -1
VRK1-205ENST00000555402 ENOX2Q16206 610 aaKnown RBP8.8□□□□□ -1
VRK1-205ENST00000555402 PRAMEF13Q5VWM6 474 aa8.8□□□□□ -1
VRK1-205ENST00000555402 PCNX4Q63HM2 1172 aa8.8□□□□□ -1
VRK1-205ENST00000555402 CDH24Q86UP0 819 aa8.8□□□□□ -1
VRK1-205ENST00000555402 CREG2Q8IUH2 290 aa8.8□□□□□ -1
VRK1-205ENST00000555402 XAGE3Q8WTP9 111 aa8.8□□□□□ -1
VRK1-205ENST00000555402 SRCIN1Q9C0H9 1055 aa8.8□□□□□ -1
VRK1-205ENST00000555402 MCOLN1Q9GZU1 580 aa8.8□□□□□ -1
VRK1-205ENST00000555402 SP110Q9HB58 689 aa8.8□□□□□ -1
VRK1-205ENST00000555402 WASH4PA8MWX3 477 aa8.79□□□□□ -1
VRK1-205ENST00000555402 FOXD2O60548 495 aaPredicted RBP8.79□□□□□ -1
VRK1-205ENST00000555402 DLG4P78352 724 aa8.79□□□□□ -1
VRK1-205ENST00000555402 PLCB3Q01970 1234 aa8.79□□□□□ -1
VRK1-205ENST00000555402 PIWIL2Q8TC59 973 aaKnown RBP8.79□□□□□ -1
VRK1-205ENST00000555402 ANKRD24Q8TF21 1146 aa8.79□□□□□ -1
VRK1-205ENST00000555402 BCL11AQ9H165 835 aa8.79□□□□□ -1
VRK1-205ENST00000555402 SNCAIPQ9Y6H5 919 aa8.79□□□□□ -1
VRK1-205ENST00000555402 A0A0G2JLL6 359 aaPredicted RBP8.78□□□□□ -1
VRK1-205ENST00000555402 OSBPL7Q9BZF2 842 aa8.78□□□□□ -1
VRK1-205ENST00000555402 CELA3AP09093 270 aa8.77□□□□□ -1.01
VRK1-205ENST00000555402 MAPK8P45983 427 aa8.77□□□□□ -1.01
VRK1-205ENST00000555402 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.77□□□□□ -1.01
VRK1-205ENST00000555402 FBXO33Q7Z6M2 555 aa8.77□□□□□ -1.01
VRK1-205ENST00000555402 IRF2BP1Q8IU81 584 aa8.77□□□□□ -1.01
VRK1-205ENST00000555402 C19orf44Q9H6X5 657 aa8.77□□□□□ -1.01
VRK1-205ENST00000555402 MYOCOSA0A1B0GUC4 107 aa8.76□□□□□ -1.01
VRK1-205ENST00000555402 TREHO43280 583 aa8.76□□□□□ -1.01
VRK1-205ENST00000555402 P4HBP07237 508 aaKnown RBP8.76□□□□□ -1.01
VRK1-205ENST00000555402 TPP2P29144 1249 aaPredicted RBP8.76□□□□□ -1.01
VRK1-205ENST00000555402 CDK8P49336 464 aa8.76□□□□□ -1.01
VRK1-205ENST00000555402 TAGLNQ01995 201 aaKnown RBP8.76□□□□□ -1.01
VRK1-205ENST00000555402 PDZD8Q8NEN9 1154 aa8.76□□□□□ -1.01
VRK1-205ENST00000555402 KCNC2Q96PR1 638 aa8.76□□□□□ -1.01
VRK1-205ENST00000555402 DUSP15Q9H1R2 295 aaPredicted RBP8.76□□□□□ -1.01
VRK1-205ENST00000555402 SLC6A17Q9H1V8 727 aa8.76□□□□□ -1.01
VRK1-205ENST00000555402 PEX10O60683 326 aa8.75□□□□□ -1.01
VRK1-205ENST00000555402 GRK4P32298 578 aa8.75□□□□□ -1.01
VRK1-205ENST00000555402 WIPI1Q5MNZ9 446 aaPredicted RBP8.75□□□□□ -1.01
VRK1-205ENST00000555402 ZNF605Q86T29 641 aa8.75□□□□□ -1.01
VRK1-205ENST00000555402 LILRA2Q8N149 483 aa8.75□□□□□ -1.01
VRK1-205ENST00000555402 GAL3ST3Q96A11 431 aa8.75□□□□□ -1.01
VRK1-205ENST00000555402 Q96M66 194 aa8.75□□□□□ -1.01
VRK1-205ENST00000555402 CNOT6Q9ULM6 557 aaKnown RBP8.75□□□□□ -1.01
VRK1-205ENST00000555402 SEMA7AO75326 666 aa8.74□□□□□ -1.01
VRK1-205ENST00000555402 ZGLP1P0C6A0 271 aa8.74□□□□□ -1.01
VRK1-205ENST00000555402 GAB4Q2WGN9 574 aa8.74□□□□□ -1.01
VRK1-205ENST00000555402 MARCH10Q8NA82 808 aaPredicted RBP8.74□□□□□ -1.01
VRK1-205ENST00000555402 KIAA1522Q9P206 1035 aaPredicted RBP8.74□□□□□ -1.01
VRK1-205ENST00000555402 TIGD5Q53EQ6 642 aa8.73□□□□□ -1.01
VRK1-205ENST00000555402 OXR1Q8N573 874 aa8.73□□□□□ -1.01
VRK1-205ENST00000555402 TRIT1Q9H3H1 467 aaKnown RBP8.73□□□□□ -1.01
VRK1-205ENST00000555402 GIPC1O14908 333 aa8.72□□□□□ -1.01
VRK1-205ENST00000555402 SYN1P17600 705 aa8.72□□□□□ -1.01
VRK1-205ENST00000555402 FMR1Q06787 632 aaKnown RBP eCLIP8.72□□□□□ -1.01
VRK1-205ENST00000555402 NFIXQ14938 502 aa8.72□□□□□ -1.01
VRK1-205ENST00000555402 ZNF385BQ569K4 471 aa8.72□□□□□ -1.01
VRK1-205ENST00000555402 TCERG1LQ5VWI1 586 aa8.72□□□□□ -1.01
VRK1-205ENST00000555402 TMEM132EQ6IEE7 984 aa8.72□□□□□ -1.01
VRK1-205ENST00000555402 DBX2Q6ZNG2 339 aa8.72□□□□□ -1.01
VRK1-205ENST00000555402 ZNF552Q9H707 407 aaPredicted RBP8.72□□□□□ -1.01
VRK1-205ENST00000555402 CWC22Q9HCG8 908 aaKnown RBP8.72□□□□□ -1.01
VRK1-205ENST00000555402 TEX51A0A1B0GUA7 166 aa8.71□□□□□ -1.02
VRK1-205ENST00000555402 FITM1A5D6W6 292 aa8.71□□□□□ -1.02
VRK1-205ENST00000555402 LDHBP07195 334 aaKnown RBP8.71□□□□□ -1.02
VRK1-205ENST00000555402 ETV3P41162 512 aa8.71□□□□□ -1.02
VRK1-205ENST00000555402 ATP2B2Q01814 1243 aa8.71□□□□□ -1.02
VRK1-205ENST00000555402 EGR3Q06889 387 aa8.71□□□□□ -1.02
VRK1-205ENST00000555402 FBF1Q8TES7 1133 aa8.71□□□□□ -1.02
VRK1-205ENST00000555402 DPH2Q9BQC3 489 aaPredicted RBP8.71□□□□□ -1.02
VRK1-205ENST00000555402 GCM1Q9NP62 436 aa8.71□□□□□ -1.02
VRK1-205ENST00000555402 TJP2Q9UDY2 1190 aa8.71□□□□□ -1.02
VRK1-205ENST00000555402 DUSP13Q9UII6 198 aa8.71□□□□□ -1.02
VRK1-205ENST00000555402 YBX2Q9Y2T7 364 aaKnown RBP8.71□□□□□ -1.02
VRK1-205ENST00000555402 KCTD3Q9Y597 815 aa8.71□□□□□ -1.02
VRK1-205ENST00000555402 GFRA2O00451 464 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms