RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 DHX15O43143 795 aaKnown RBP8.09□□□□□ -1.11
CKS1BP1-201ENST00000555221 SMARCA5O60264 1052 aaPredicted RBP8.09□□□□□ -1.11
CKS1BP1-201ENST00000555221 GJB6O95452 261 aa8.09□□□□□ -1.11
CKS1BP1-201ENST00000555221 POLR2BP30876 1174 aaKnown RBP8.09□□□□□ -1.11
CKS1BP1-201ENST00000555221 RASA3Q14644 834 aa8.09□□□□□ -1.11
CKS1BP1-201ENST00000555221 VHLLQ6RSH7 139 aa8.09□□□□□ -1.11
CKS1BP1-201ENST00000555221 C6orf15Q6UXA7 325 aaPredicted RBP8.09□□□□□ -1.11
CKS1BP1-201ENST00000555221 ZNF214Q9UL59 606 aaPredicted RBP8.09□□□□□ -1.11
CKS1BP1-201ENST00000555221 LTBP3Q9NS15 1303 aa8.08□□□□□ -1.12
CKS1BP1-201ENST00000555221 FAM95CA0A1B0GW59 222 aa8.08□□□□□ -1.12
CKS1BP1-201ENST00000555221 TLDC2A0PJX2 215 aa8.08□□□□□ -1.12
CKS1BP1-201ENST00000555221 FAM86C2PA6NEL3 165 aa8.08□□□□□ -1.12
CKS1BP1-201ENST00000555221 PDPK1O15530 556 aa8.08□□□□□ -1.12
CKS1BP1-201ENST00000555221 CLEC3AO75596 197 aa8.08□□□□□ -1.12
CKS1BP1-201ENST00000555221 UBOX5O94941 541 aa8.08□□□□□ -1.12
CKS1BP1-201ENST00000555221 CANXP27824 592 aaKnown RBP8.08□□□□□ -1.12
CKS1BP1-201ENST00000555221 PMS1P54277 932 aaKnown RBP8.08□□□□□ -1.12
CKS1BP1-201ENST00000555221 SLC7A5Q01650 507 aa8.08□□□□□ -1.12
CKS1BP1-201ENST00000555221 IFRD2Q12894 506 aaPredicted RBP8.08□□□□□ -1.12
CKS1BP1-201ENST00000555221 RASGRF1Q13972 1273 aa8.08□□□□□ -1.12
CKS1BP1-201ENST00000555221 PAOXQ6QHF9 649 aa8.08□□□□□ -1.12
CKS1BP1-201ENST00000555221 ARMC10Q8N2F6 343 aa8.08□□□□□ -1.12
CKS1BP1-201ENST00000555221 BAHD1Q8TBE0 780 aaPredicted RBP8.08□□□□□ -1.12
CKS1BP1-201ENST00000555221 MICAL1Q8TDZ2 1067 aa8.08□□□□□ -1.12
CKS1BP1-201ENST00000555221 XAGE3Q8WTP9 111 aa8.08□□□□□ -1.12
CKS1BP1-201ENST00000555221 SLC6A18Q96N87 628 aa8.08□□□□□ -1.12
CKS1BP1-201ENST00000555221 KCNF1Q9H3M0 494 aa8.08□□□□□ -1.12
CKS1BP1-201ENST00000555221 SUCOQ9UBS9 1254 aaKnown RBP8.08□□□□□ -1.12
CKS1BP1-201ENST00000555221 STK17AQ9UEE5 414 aa8.08□□□□□ -1.12
CKS1BP1-201ENST00000555221 GNPTABQ3T906 1256 aa8.07□□□□□ -1.12
CKS1BP1-201ENST00000555221 LETMD1Q6P1Q0 360 aa8.07□□□□□ -1.12
CKS1BP1-201ENST00000555221 EEPD1Q7L9B9 569 aa8.07□□□□□ -1.12
CKS1BP1-201ENST00000555221 GIMAP7Q8NHV1 300 aa8.07□□□□□ -1.12
CKS1BP1-201ENST00000555221 SMARCC1Q92922 1105 aaPredicted RBP8.07□□□□□ -1.12
CKS1BP1-201ENST00000555221 MIPEPQ99797 713 aa8.07□□□□□ -1.12
CKS1BP1-201ENST00000555221 KRBA1A5PL33 1030 aa8.06□□□□□ -1.12
CKS1BP1-201ENST00000555221 FAM221BA6H8Z2 402 aa8.06□□□□□ -1.12
CKS1BP1-201ENST00000555221 ETV3P41162 512 aa8.06□□□□□ -1.12
CKS1BP1-201ENST00000555221 CHRNA4P43681 627 aa8.06□□□□□ -1.12
CKS1BP1-201ENST00000555221 NFKBIBQ15653 356 aa8.06□□□□□ -1.12
CKS1BP1-201ENST00000555221 BEND4Q6ZU67 534 aa8.06□□□□□ -1.12
CKS1BP1-201ENST00000555221 CD163Q86VB7 1156 aa8.06□□□□□ -1.12
CKS1BP1-201ENST00000555221 TMEM192Q8IY95 271 aa8.06□□□□□ -1.12
CKS1BP1-201ENST00000555221 ST13P5Q8NFI4 369 aaPredicted RBP8.06□□□□□ -1.12
CKS1BP1-201ENST00000555221 DCAF5Q96JK2 942 aa8.06□□□□□ -1.12
CKS1BP1-201ENST00000555221 PSMG3-AS1Q96PY0 264 aa8.06□□□□□ -1.12
CKS1BP1-201ENST00000555221 LGR6Q9HBX8 967 aa8.06□□□□□ -1.12
CKS1BP1-201ENST00000555221 PRDM10Q9NQV6 1147 aa8.06□□□□□ -1.12
CKS1BP1-201ENST00000555221 CEP131Q9UPN4 1083 aa8.06□□□□□ -1.12
CKS1BP1-201ENST00000555221 B2RBV5 119 aa8.05□□□□□ -1.12
CKS1BP1-201ENST00000555221 RNF4P78317 190 aa8.05□□□□□ -1.12
CKS1BP1-201ENST00000555221 KIAA1211LQ6NV74 962 aa8.05□□□□□ -1.12
CKS1BP1-201ENST00000555221 SEZ6L2Q6UXD5 910 aa8.05□□□□□ -1.12
CKS1BP1-201ENST00000555221 CLEC10AQ8IUN9 316 aa8.05□□□□□ -1.12
CKS1BP1-201ENST00000555221 PPP1R13LQ8WUF5 828 aa8.05□□□□□ -1.12
CKS1BP1-201ENST00000555221 ZNF669Q96BR6 464 aaPredicted RBP8.05□□□□□ -1.12
CKS1BP1-201ENST00000555221 SSBP4Q9BWG4 385 aaPredicted RBP8.05□□□□□ -1.12
CKS1BP1-201ENST00000555221 EPN3Q9H201 632 aa8.05□□□□□ -1.12
CKS1BP1-201ENST00000555221 PCDHB10Q9UN67 800 aa8.05□□□□□ -1.12
CKS1BP1-201ENST00000555221 TBX22Q9Y458 520 aa8.05□□□□□ -1.12
CKS1BP1-201ENST00000555221 C1QTNF9BB2RNN3 333 aa8.04□□□□□ -1.12
CKS1BP1-201ENST00000555221 DYNC1LI2O43237 492 aaPredicted RBP8.04□□□□□ -1.12
CKS1BP1-201ENST00000555221 SLITRK5O94991 958 aa8.04□□□□□ -1.12
CKS1BP1-201ENST00000555221 NAT2P11245 290 aa8.04□□□□□ -1.12
CKS1BP1-201ENST00000555221 MTERF2Q49AM1 385 aa8.04□□□□□ -1.12
CKS1BP1-201ENST00000555221 DNAJB8Q8NHS0 232 aa8.04□□□□□ -1.12
CKS1BP1-201ENST00000555221 KLHL6Q8WZ60 621 aa8.04□□□□□ -1.12
CKS1BP1-201ENST00000555221 FAM83CQ9BQN1 747 aa8.04□□□□□ -1.12
CKS1BP1-201ENST00000555221 CADPSQ9ULU8 1353 aa8.03□□□□□ -1.12
CKS1BP1-201ENST00000555221 CYP7A1P22680 504 aa8.03□□□□□ -1.12
CKS1BP1-201ENST00000555221 ZNF143P52747 638 aaPredicted RBP8.03□□□□□ -1.12
CKS1BP1-201ENST00000555221 CDK5R2Q13319 367 aa8.03□□□□□ -1.12
CKS1BP1-201ENST00000555221 MRM1Q6IN84 353 aaKnown RBP8.03□□□□□ -1.12
CKS1BP1-201ENST00000555221 FAM177A1Q8N128 213 aaPredicted RBP8.03□□□□□ -1.12
CKS1BP1-201ENST00000555221 COX4I2Q96KJ9 171 aa8.03□□□□□ -1.12
CKS1BP1-201ENST00000555221 KREMEN1Q96MU8 473 aa8.03□□□□□ -1.12
CKS1BP1-201ENST00000555221 DNAJC7Q99615 494 aa8.03□□□□□ -1.12
CKS1BP1-201ENST00000555221 ASPNQ9BXN1 380 aa8.03□□□□□ -1.12
CKS1BP1-201ENST00000555221 C1GALT1Q9NS00 363 aa8.03□□□□□ -1.12
CKS1BP1-201ENST00000555221 GATA4P43694 442 aa8.02□□□□□ -1.13
CKS1BP1-201ENST00000555221 CDH24Q86UP0 819 aa8.02□□□□□ -1.13
CKS1BP1-201ENST00000555221 JAZF1Q86VZ6 243 aa8.02□□□□□ -1.13
CKS1BP1-201ENST00000555221 CCDC144CPQ8IYA2 1237 aa8.02□□□□□ -1.13
CKS1BP1-201ENST00000555221 TOP6BLQ8N6T0 577 aa8.02□□□□□ -1.13
CKS1BP1-201ENST00000555221 RNF141Q8WVD5 230 aa8.02□□□□□ -1.13
CKS1BP1-201ENST00000555221 MKRN2Q9H000 416 aaKnown RBP8.02□□□□□ -1.13
CKS1BP1-201ENST00000555221 SUSD5O60279 629 aa8.01□□□□□ -1.13
CKS1BP1-201ENST00000555221 NBPF12Q5TAG4 269 aaPredicted RBP8.01□□□□□ -1.13
CKS1BP1-201ENST00000555221 TDRD10Q5VZ19 366 aaKnown RBP8.01□□□□□ -1.13
CKS1BP1-201ENST00000555221 SDE2Q6IQ49 451 aa8.01□□□□□ -1.13
CKS1BP1-201ENST00000555221 PPFIBP1Q86W92 1011 aa8.01□□□□□ -1.13
CKS1BP1-201ENST00000555221 TP53INP1Q96A56 240 aa8.01□□□□□ -1.13
CKS1BP1-201ENST00000555221 DUSP23Q9BVJ7 150 aa8.01□□□□□ -1.13
CKS1BP1-201ENST00000555221 STOML1Q9UBI4 398 aa8.01□□□□□ -1.13
CKS1BP1-201ENST00000555221 TPX2Q9ULW0 747 aaKnown RBP8.01□□□□□ -1.13
CKS1BP1-201ENST00000555221 RAXQ9Y2V3 346 aa8.01□□□□□ -1.13
CKS1BP1-201ENST00000555221 MRPL42Q9Y6G3 142 aaKnown RBP8.01□□□□□ -1.13
CKS1BP1-201ENST00000555221 ANKRD34BA5PLL1 514 aa8□□□□□ -1.13
CKS1BP1-201ENST00000555221 IQCA1LA6NCM1 817 aa8□□□□□ -1.13
CKS1BP1-201ENST00000555221 C9IYK1 514 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms