RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 CACNA1AO00555 2505 aa12.58□□□□□ -0.4
TMEM260-206ENST00000555046 USP17L10C9JJH3 530 aa12.58□□□□□ -0.4
TMEM260-206ENST00000555046 ZNF213O14771 459 aa12.58□□□□□ -0.4
TMEM260-206ENST00000555046 EIF5BO60841 1220 aaKnown RBP12.58□□□□□ -0.4
TMEM260-206ENST00000555046 CYP2D6P10635 497 aa12.58□□□□□ -0.4
TMEM260-206ENST00000555046 USP14P54578 494 aa12.58□□□□□ -0.4
TMEM260-206ENST00000555046 SPP2Q13103 211 aa12.58□□□□□ -0.4
TMEM260-206ENST00000555046 PABPC4Q13310 644 aaKnown RBP eCLIP12.58□□□□□ -0.4
TMEM260-206ENST00000555046 RAB3GAP1Q15042 981 aa12.58□□□□□ -0.4
TMEM260-206ENST00000555046 DYNLL2Q96FJ2 89 aa12.58□□□□□ -0.4
TMEM260-206ENST00000555046 RNF41Q9H4P4 317 aaPredicted RBP12.58□□□□□ -0.4
TMEM260-206ENST00000555046 SH2D4AQ9H788 454 aa12.58□□□□□ -0.4
TMEM260-206ENST00000555046 DNAJC18Q9H819 358 aa12.58□□□□□ -0.4
TMEM260-206ENST00000555046 KANSL2Q9H9L4 492 aa12.58□□□□□ -0.4
TMEM260-206ENST00000555046 TMOD4Q9NZQ9 345 aa12.58□□□□□ -0.4
TMEM260-206ENST00000555046 ANAPC4Q9UJX5 808 aa12.58□□□□□ -0.4
TMEM260-206ENST00000555046 ZBTB21Q9ULJ3 1066 aa12.58□□□□□ -0.4
TMEM260-206ENST00000555046 ZMYM6O95789 1325 aa12.58□□□□□ -0.4
TMEM260-206ENST00000555046 LAMA2P24043 3122 aaKnown RBP12.57□□□□□ -0.4
TMEM260-206ENST00000555046 PRUNE2Q8WUY3 3088 aa12.57□□□□□ -0.4
TMEM260-206ENST00000555046 TRIM75PA6NK02 468 aa12.57□□□□□ -0.4
TMEM260-206ENST00000555046 SOX1O00570 391 aaPredicted RBP12.57□□□□□ -0.4
TMEM260-206ENST00000555046 GDF11O95390 407 aa12.57□□□□□ -0.4
TMEM260-206ENST00000555046 TBC1D8O95759 1140 aa12.57□□□□□ -0.4
TMEM260-206ENST00000555046 GJA5P36382 358 aa12.57□□□□□ -0.4
TMEM260-206ENST00000555046 BACE1P56817 501 aa12.57□□□□□ -0.4
TMEM260-206ENST00000555046 IMMTQ16891 758 aaKnown RBP12.57□□□□□ -0.4
TMEM260-206ENST00000555046 ANKRD23Q86SG2 305 aa12.57□□□□□ -0.4
TMEM260-206ENST00000555046 ZNF589Q86UQ0 364 aaPredicted RBP12.57□□□□□ -0.4
TMEM260-206ENST00000555046 PRO3102Q9H379 93 aa12.57□□□□□ -0.4
TMEM260-206ENST00000555046 ZFYVE28Q9HCC9 887 aa12.57□□□□□ -0.4
TMEM260-206ENST00000555046 EPB41L4AQ9HCS5 686 aaPredicted RBP12.57□□□□□ -0.4
TMEM260-206ENST00000555046 SLC45A1Q9Y2W3 748 aa12.57□□□□□ -0.4
TMEM260-206ENST00000555046 ECM29Q5VYK3 1845 aa12.57□□□□□ -0.4
TMEM260-206ENST00000555046 CYP2D7A0A087X1C5 515 aa12.56□□□□□ -0.4
TMEM260-206ENST00000555046 A0A0G2JLL6 359 aaPredicted RBP12.56□□□□□ -0.4
TMEM260-206ENST00000555046 SGSM2O43147 1006 aa12.56□□□□□ -0.4
TMEM260-206ENST00000555046 SLURP2P0DP57 97 aa12.56□□□□□ -0.4
TMEM260-206ENST00000555046 VPS53Q5VIR6 699 aa12.56□□□□□ -0.4
TMEM260-206ENST00000555046 USP17L2Q6R6M4 530 aa12.56□□□□□ -0.4
TMEM260-206ENST00000555046 MFSD6Q6ZSS7 791 aa12.56□□□□□ -0.4
TMEM260-206ENST00000555046 PRRT2Q7Z6L0 340 aaPredicted RBP12.56□□□□□ -0.4
TMEM260-206ENST00000555046 PROCA1Q8NCQ7 364 aaPredicted RBP12.56□□□□□ -0.4
TMEM260-206ENST00000555046 BRI3BPQ8WY22 251 aa12.56□□□□□ -0.4
TMEM260-206ENST00000555046 FEZ1Q99689 392 aa12.56□□□□□ -0.4
TMEM260-206ENST00000555046 CFHR5Q9BXR6 569 aa12.56□□□□□ -0.4
TMEM260-206ENST00000555046 ARHGEF10LQ9HCE6 1279 aa12.56□□□□□ -0.4
TMEM260-206ENST00000555046 MAST2Q6P0Q8 1798 aa12.56□□□□□ -0.4
TMEM260-206ENST00000555046 GPR25O00155 361 aa12.55□□□□□ -0.4
TMEM260-206ENST00000555046 CDC45O75419 566 aa12.55□□□□□ -0.4
TMEM260-206ENST00000555046 TSPY3P0CV98 308 aa12.55□□□□□ -0.4
TMEM260-206ENST00000555046 TSPY8P0CW00 308 aa12.55□□□□□ -0.4
TMEM260-206ENST00000555046 OSBPP22059 807 aa12.55□□□□□ -0.4
TMEM260-206ENST00000555046 RRP1BQ14684 758 aaKnown RBP12.55□□□□□ -0.4
TMEM260-206ENST00000555046 ARHGEF6Q15052 776 aa12.55□□□□□ -0.4
TMEM260-206ENST00000555046 CCDC178Q5BJE1 867 aa12.55□□□□□ -0.4
TMEM260-206ENST00000555046 NOM1Q5C9Z4 860 aaKnown RBP12.55□□□□□ -0.4
TMEM260-206ENST00000555046 SH3D19Q5HYK7 790 aa12.55□□□□□ -0.4
TMEM260-206ENST00000555046 LRCH3Q96II8 777 aa12.55□□□□□ -0.4
TMEM260-206ENST00000555046 KIAA1683Q9H0B3 1180 aa12.55□□□□□ -0.4
TMEM260-206ENST00000555046 PNMA3Q9UL41 463 aa12.55□□□□□ -0.4
TMEM260-206ENST00000555046 DOCK2Q92608 1830 aa12.54□□□□□ -0.4
TMEM260-206ENST00000555046 BTBD19C9JJ37 291 aa12.54□□□□□ -0.4
TMEM260-206ENST00000555046 PDHXO00330 501 aa12.54□□□□□ -0.4
TMEM260-206ENST00000555046 ORC4O43929 436 aa12.54□□□□□ -0.4
TMEM260-206ENST00000555046 FGRP09769 529 aa12.54□□□□□ -0.4
TMEM260-206ENST00000555046 COL9A1P20849 921 aa12.54□□□□□ -0.4
TMEM260-206ENST00000555046 RASA1P20936 1047 aa12.54□□□□□ -0.4
TMEM260-206ENST00000555046 TRDNQ13061 729 aa12.54□□□□□ -0.4
TMEM260-206ENST00000555046 SEPT2Q15019 361 aa12.54□□□□□ -0.4
TMEM260-206ENST00000555046 AKNAD1Q5T1N1 836 aa12.54□□□□□ -0.4
TMEM260-206ENST00000555046 GADL1Q6ZQY3 521 aa12.54□□□□□ -0.4
TMEM260-206ENST00000555046 SLC44A5Q8NCS7 719 aa12.54□□□□□ -0.4
TMEM260-206ENST00000555046 PARK7Q99497 189 aaKnown RBP12.54□□□□□ -0.4
TMEM260-206ENST00000555046 PTPN18Q99952 460 aa12.54□□□□□ -0.4
TMEM260-206ENST00000555046 CNNM2Q9H8M5 875 aa12.54□□□□□ -0.4
TMEM260-206ENST00000555046 TOMM22Q9NS69 142 aa12.54□□□□□ -0.4
TMEM260-206ENST00000555046 SYNPO2Q9UMS6 1093 aa12.54□□□□□ -0.4
TMEM260-206ENST00000555046 AGTPBP1Q9UPW5 1226 aa12.54□□□□□ -0.4
TMEM260-206ENST00000555046 ROBO3Q96MS0 1386 aa12.54□□□□□ -0.4
TMEM260-206ENST00000555046 AK9Q5TCS8 1911 aa12.53□□□□□ -0.4
TMEM260-206ENST00000555046 TSPY2A6NKD2 308 aa12.53□□□□□ -0.4
TMEM260-206ENST00000555046 FOXP2O15409 715 aa12.53□□□□□ -0.4
TMEM260-206ENST00000555046 RANBP6O60518 1105 aaKnown RBP12.53□□□□□ -0.4
TMEM260-206ENST00000555046 AKR1B1P15121 316 aa12.53□□□□□ -0.4
TMEM260-206ENST00000555046 TFAP4Q01664 338 aa12.53□□□□□ -0.4
TMEM260-206ENST00000555046 ICA1Q05084 483 aa12.53□□□□□ -0.4
TMEM260-206ENST00000555046 MTMR2Q13614 643 aa12.53□□□□□ -0.4
TMEM260-206ENST00000555046 TAF1CQ15572 869 aaPredicted RBP12.53□□□□□ -0.4
TMEM260-206ENST00000555046 STK11IPQ8N1F8 1099 aa12.53□□□□□ -0.4
TMEM260-206ENST00000555046 NEDD1Q8NHV4 660 aa12.53□□□□□ -0.4
TMEM260-206ENST00000555046 STAG1Q8WVM7 1258 aa12.53□□□□□ -0.4
TMEM260-206ENST00000555046 LPAR1Q92633 364 aa12.53□□□□□ -0.4
TMEM260-206ENST00000555046 ESR2Q92731 530 aa12.53□□□□□ -0.4
TMEM260-206ENST00000555046 MAP4K1Q92918 833 aa12.53□□□□□ -0.4
TMEM260-206ENST00000555046 ESYT1Q9BSJ8 1104 aa12.53□□□□□ -0.4
TMEM260-206ENST00000555046 KRT23Q9C075 422 aa12.53□□□□□ -0.4
TMEM260-206ENST00000555046 GOPCQ9HD26 462 aa12.53□□□□□ -0.4
TMEM260-206ENST00000555046 NYAP2Q9P242 653 aa12.53□□□□□ -0.4
TMEM260-206ENST00000555046 IGF2BP3O00425 579 aaKnown RBP eCLIP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms