RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 CCDC184Q52MB2 194 aa6.07□□□□□ -1.44
ATXN3-231ENST00000554994 TBC1D9BQ66K14 1250 aa6.07□□□□□ -1.44
ATXN3-231ENST00000554994 STYK1Q6J9G0 422 aa6.07□□□□□ -1.44
ATXN3-231ENST00000554994 Q7L0L9 218 aa6.07□□□□□ -1.44
ATXN3-231ENST00000554994 NPM2Q86SE8 214 aaKnown RBP6.07□□□□□ -1.44
ATXN3-231ENST00000554994 USP48Q86UV5 1035 aa6.07□□□□□ -1.44
ATXN3-231ENST00000554994 IL17REQ8NFR9 667 aa6.07□□□□□ -1.44
ATXN3-231ENST00000554994 RHPN1Q8TCX5 695 aa6.07□□□□□ -1.44
ATXN3-231ENST00000554994 C7orf43Q8WVR3 580 aa6.07□□□□□ -1.44
ATXN3-231ENST00000554994 JDP2Q8WYK2 163 aa6.07□□□□□ -1.44
ATXN3-231ENST00000554994 BHMTQ93088 406 aa6.07□□□□□ -1.44
ATXN3-231ENST00000554994 CEP63Q96MT8 703 aa6.07□□□□□ -1.44
ATXN3-231ENST00000554994 UBE2OQ9C0C9 1292 aaKnown RBP6.07□□□□□ -1.44
ATXN3-231ENST00000554994 PCMTD2Q9NV79 361 aa6.07□□□□□ -1.44
ATXN3-231ENST00000554994 NCAPD2Q15021 1401 aa6.07□□□□□ -1.44
ATXN3-231ENST00000554994 BACH1O14867 736 aa6.06□□□□□ -1.44
ATXN3-231ENST00000554994 CANXP27824 592 aaKnown RBP6.06□□□□□ -1.44
ATXN3-231ENST00000554994 NOS2P35228 1153 aa6.06□□□□□ -1.44
ATXN3-231ENST00000554994 TAF7Q15545 349 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-231ENST00000554994 NFE2L2Q16236 605 aa6.06□□□□□ -1.44
ATXN3-231ENST00000554994 MAP7D1Q3KQU3 841 aa6.06□□□□□ -1.44
ATXN3-231ENST00000554994 SLC51AQ86UW1 340 aa6.06□□□□□ -1.44
ATXN3-231ENST00000554994 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.06□□□□□ -1.44
ATXN3-231ENST00000554994 DMRTC2Q8IXT2 367 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-231ENST00000554994 TRPM4Q8TD43 1214 aa6.06□□□□□ -1.44
ATXN3-231ENST00000554994 RUNDC1Q96C34 613 aa6.06□□□□□ -1.44
ATXN3-231ENST00000554994 MASTLQ96GX5 879 aa6.06□□□□□ -1.44
ATXN3-231ENST00000554994 THUMPD2Q9BTF0 503 aaKnown RBP6.06□□□□□ -1.44
ATXN3-231ENST00000554994 GBA2Q9HCG7 927 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-231ENST00000554994 BRD7Q9NPI1 651 aa6.06□□□□□ -1.44
ATXN3-231ENST00000554994 ADARB2Q9NS39 739 aaKnown RBP6.06□□□□□ -1.44
ATXN3-231ENST00000554994 ZBTB1Q9Y2K1 713 aa6.06□□□□□ -1.44
ATXN3-231ENST00000554994 RANBP2P49792 3224 aaKnown RBP6.06□□□□□ -1.44
ATXN3-231ENST00000554994 ARFGEF2Q9Y6D5 1785 aa6.06□□□□□ -1.44
ATXN3-231ENST00000554994 SHTN1A0MZ66 631 aa6.05□□□□□ -1.44
ATXN3-231ENST00000554994 EML1O00423 815 aa6.05□□□□□ -1.44
ATXN3-231ENST00000554994 APAF1O14727 1248 aa6.05□□□□□ -1.44
ATXN3-231ENST00000554994 KCNQ3O43525 872 aa6.05□□□□□ -1.44
ATXN3-231ENST00000554994 PLA2G5P39877 138 aa6.05□□□□□ -1.44
ATXN3-231ENST00000554994 TMPOP42166 694 aaKnown RBP6.05□□□□□ -1.44
ATXN3-231ENST00000554994 HIRAP54198 1017 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-231ENST00000554994 SH3PXD2AQ5TCZ1 1133 aa6.05□□□□□ -1.44
ATXN3-231ENST00000554994 DIEXFQ68CQ4 756 aaKnown RBP6.05□□□□□ -1.44
ATXN3-231ENST00000554994 NGEFQ8N5V2 710 aa6.05□□□□□ -1.44
ATXN3-231ENST00000554994 CNBD1Q8NA66 436 aa6.05□□□□□ -1.44
ATXN3-231ENST00000554994 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.05□□□□□ -1.44
ATXN3-231ENST00000554994 HSH2DQ96JZ2 352 aa6.05□□□□□ -1.44
ATXN3-231ENST00000554994 KRTAP4-7Q9BYR0 210 aa6.05□□□□□ -1.44
ATXN3-231ENST00000554994 R3HDMLQ9H3Y0 253 aa6.05□□□□□ -1.44
ATXN3-231ENST00000554994 GPRC5DQ9NZD1 345 aa6.05□□□□□ -1.44
ATXN3-231ENST00000554994 SCHIP1Q9P0W5 487 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-231ENST00000554994 RNF112Q9ULX5 631 aa6.05□□□□□ -1.44
ATXN3-231ENST00000554994 BRCA2P51587 3418 aa6.04□□□□□ -1.44
ATXN3-231ENST00000554994 SFI1A8K8P3 1242 aa6.04□□□□□ -1.44
ATXN3-231ENST00000554994 ADM5C9JUS6 153 aa6.04□□□□□ -1.44
ATXN3-231ENST00000554994 HTATSF1O43719 755 aaKnown RBP6.04□□□□□ -1.44
ATXN3-231ENST00000554994 SSTR4P31391 388 aa6.04□□□□□ -1.44
ATXN3-231ENST00000554994 TXKP42681 527 aa6.04□□□□□ -1.44
ATXN3-231ENST00000554994 GMPSP49915 693 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-231ENST00000554994 ZNF790Q6PG37 636 aa6.04□□□□□ -1.44
ATXN3-231ENST00000554994 CDC37L1Q7L3B6 337 aa6.04□□□□□ -1.44
ATXN3-231ENST00000554994 RASAL3Q86YV0 1011 aa6.04□□□□□ -1.44
ATXN3-231ENST00000554994 RTKN2Q8IZC4 609 aa6.04□□□□□ -1.44
ATXN3-231ENST00000554994 FMR1NBQ8N0W7 255 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-231ENST00000554994 LARGE2Q8N3Y3 721 aa6.04□□□□□ -1.44
ATXN3-231ENST00000554994 DEFB123Q8N688 67 aa6.04□□□□□ -1.44
ATXN3-231ENST00000554994 FAM122AQ96E09 287 aa6.04□□□□□ -1.44
ATXN3-231ENST00000554994 FMNL2Q96PY5 1086 aa6.04□□□□□ -1.44
ATXN3-231ENST00000554994 PLEKHF1Q96S99 279 aa6.04□□□□□ -1.44
ATXN3-231ENST00000554994 TRIM17Q9Y577 477 aa6.04□□□□□ -1.44
ATXN3-231ENST00000554994 UNC80Q8N2C7 3258 aa6.04□□□□□ -1.44
ATXN3-231ENST00000554994 NUP98P52948 1817 aa6.04□□□□□ -1.44
ATXN3-231ENST00000554994 LAMB4A4D0S4 1761 aa6.03□□□□□ -1.44
ATXN3-231ENST00000554994 RBBP6Q7Z6E9 1792 aaKnown RBP6.03□□□□□ -1.44
ATXN3-231ENST00000554994 UBR2Q8IWV8 1755 aa6.03□□□□□ -1.44
ATXN3-231ENST00000554994 FKTNO75072 461 aa6.03□□□□□ -1.44
ATXN3-231ENST00000554994 STARD3NLO95772 234 aa6.03□□□□□ -1.44
ATXN3-231ENST00000554994 A1BGP04217 495 aa6.03□□□□□ -1.44
ATXN3-231ENST00000554994 EIF2S2P20042 333 aaKnown RBP6.03□□□□□ -1.44
ATXN3-231ENST00000554994 IREB2P48200 963 aaKnown RBP6.03□□□□□ -1.44
ATXN3-231ENST00000554994 PIP4K2AP48426 406 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-231ENST00000554994 ST5P78524 1137 aa6.03□□□□□ -1.44
ATXN3-231ENST00000554994 LMOD3Q0VAK6 560 aa6.03□□□□□ -1.44
ATXN3-231ENST00000554994 IRF5Q13568 498 aa6.03□□□□□ -1.44
ATXN3-231ENST00000554994 TEAD4Q15561 434 aa6.03□□□□□ -1.44
ATXN3-231ENST00000554994 INTS3Q68E01 1043 aaKnown RBP6.03□□□□□ -1.44
ATXN3-231ENST00000554994 SLC9A9Q8IVB4 645 aa6.03□□□□□ -1.44
ATXN3-231ENST00000554994 C2orf69Q8N8R5 385 aa6.03□□□□□ -1.44
ATXN3-231ENST00000554994 ZNF496Q96IT1 587 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-231ENST00000554994 SSBP4Q9BWG4 385 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-231ENST00000554994 PRM3Q9NNZ6 103 aa6.03□□□□□ -1.44
ATXN3-231ENST00000554994 ZNF358Q9NW07 568 aa6.03□□□□□ -1.44
ATXN3-231ENST00000554994 TSPYL4Q9UJ04 414 aa6.03□□□□□ -1.44
ATXN3-231ENST00000554994 SLC6A14Q9UN76 642 aa6.03□□□□□ -1.44
ATXN3-231ENST00000554994 KCNH4Q9UQ05 1017 aa6.03□□□□□ -1.44
ATXN3-231ENST00000554994 GTF3C3Q9Y5Q9 886 aa6.03□□□□□ -1.44
ATXN3-231ENST00000554994 HTTP42858 3142 aa6.03□□□□□ -1.44
ATXN3-231ENST00000554994 CACNA1FO60840 1977 aa6.02□□□□□ -1.45
ATXN3-231ENST00000554994 SERTM1A2A2V5 107 aa6.02□□□□□ -1.45
ATXN3-231ENST00000554994 CYP19A1P11511 503 aaPredicted RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms