RNA–Protein interactions for RNA: ENST00000554822.5

LINC01550-204, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 3

Gene LINC01550, Length 852 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-204ENST00000554822 VSIG10LQ86VR7 867 aa7.78□□□□□ -1.16
LINC01550-204ENST00000554822 PCGF6Q9BYE7 350 aa7.78□□□□□ -1.16
LINC01550-204ENST00000554822 MKNK2Q9HBH9 465 aa7.78□□□□□ -1.16
LINC01550-204ENST00000554822 PRDM5Q9NQX1 630 aaPredicted RBP7.78□□□□□ -1.16
LINC01550-204ENST00000554822 CCDC9Q9Y3X0 531 aaKnown RBP7.78□□□□□ -1.16
LINC01550-204ENST00000554822 OAS3Q9Y6K5 1087 aaKnown RBP7.78□□□□□ -1.16
LINC01550-204ENST00000554822 KIF21AQ7Z4S6 1674 aa7.78□□□□□ -1.16
LINC01550-204ENST00000554822 TOPBP1Q92547 1522 aa7.78□□□□□ -1.16
LINC01550-204ENST00000554822 PDS5BQ9NTI5 1447 aa7.78□□□□□ -1.16
LINC01550-204ENST00000554822 RAPGEF2Q9Y4G8 1499 aa7.77□□□□□ -1.17
LINC01550-204ENST00000554822 IGF2BP3O00425 579 aaKnown RBP eCLIP7.77□□□□□ -1.17
LINC01550-204ENST00000554822 CRKP46108 304 aa7.77□□□□□ -1.17
LINC01550-204ENST00000554822 IFI16Q16666 785 aaKnown RBP7.77□□□□□ -1.17
LINC01550-204ENST00000554822 ZNF394Q53GI3 561 aa7.77□□□□□ -1.17
LINC01550-204ENST00000554822 CDH24Q86UP0 819 aa7.77□□□□□ -1.17
LINC01550-204ENST00000554822 BCL7CQ8WUZ0 217 aaPredicted RBP7.77□□□□□ -1.17
LINC01550-204ENST00000554822 BRMS1Q9HCU9 246 aa7.77□□□□□ -1.17
LINC01550-204ENST00000554822 UBP1Q9NZI7 540 aa7.77□□□□□ -1.17
LINC01550-204ENST00000554822 PRR36Q9H6K5 1346 aa7.77□□□□□ -1.17
LINC01550-204ENST00000554822 ROBO2Q9HCK4 1378 aa7.76□□□□□ -1.17
LINC01550-204ENST00000554822 VAMP1P23763 118 aa7.76□□□□□ -1.17
LINC01550-204ENST00000554822 CWF19L2Q2TBE0 894 aaKnown RBP7.76□□□□□ -1.17
LINC01550-204ENST00000554822 TMEM201Q5SNT2 666 aa7.76□□□□□ -1.17
LINC01550-204ENST00000554822 ZNF574Q6ZN55 896 aaPredicted RBP7.76□□□□□ -1.17
LINC01550-204ENST00000554822 USP48Q86UV5 1035 aa7.76□□□□□ -1.17
LINC01550-204ENST00000554822 TP53INP2Q8IXH6 220 aa7.76□□□□□ -1.17
LINC01550-204ENST00000554822 FAM13CQ8NE31 585 aa7.76□□□□□ -1.17
LINC01550-204ENST00000554822 FLCNQ8NFG4 579 aa7.76□□□□□ -1.17
LINC01550-204ENST00000554822 RNF34Q969K3 372 aa7.76□□□□□ -1.17
LINC01550-204ENST00000554822 METTL5Q9NRN9 209 aaKnown RBP7.76□□□□□ -1.17
LINC01550-204ENST00000554822 KIAA1522Q9P206 1035 aaPredicted RBP7.76□□□□□ -1.17
LINC01550-204ENST00000554822 REV1Q9UBZ9 1251 aa7.76□□□□□ -1.17
LINC01550-204ENST00000554822 MAPK8IP1Q9UQF2 711 aa7.76□□□□□ -1.17
LINC01550-204ENST00000554822 ADGRL1O94910 1474 aa7.75□□□□□ -1.17
LINC01550-204ENST00000554822 WDR97A6NE52 1622 aa7.75□□□□□ -1.17
LINC01550-204ENST00000554822 ABCA10Q8WWZ4 1543 aa7.75□□□□□ -1.17
LINC01550-204ENST00000554822 GNAT3A8MTJ3 354 aa7.75□□□□□ -1.17
LINC01550-204ENST00000554822 PRR33A8MZF0 331 aa7.75□□□□□ -1.17
LINC01550-204ENST00000554822 CHURC1-FNTBB4DL54 471 aa7.75□□□□□ -1.17
LINC01550-204ENST00000554822 HTR3BO95264 441 aa7.75□□□□□ -1.17
LINC01550-204ENST00000554822 CD96P40200 585 aa7.75□□□□□ -1.17
LINC01550-204ENST00000554822 SFRP5Q5T4F7 317 aa7.75□□□□□ -1.17
LINC01550-204ENST00000554822 SPRED2Q7Z698 418 aa7.75□□□□□ -1.17
LINC01550-204ENST00000554822 LRRC3Q9BY71 257 aa7.75□□□□□ -1.17
LINC01550-204ENST00000554822 KLHL3Q9UH77 587 aa7.75□□□□□ -1.17
LINC01550-204ENST00000554822 SLC5A6Q9Y289 635 aa7.75□□□□□ -1.17
LINC01550-204ENST00000554822 PCDHB14Q9Y5E9 798 aa7.75□□□□□ -1.17
LINC01550-204ENST00000554822 PCDHGB7Q9Y5F8 929 aa7.75□□□□□ -1.17
LINC01550-204ENST00000554822 TMEM265A0A087WTH1 108 aa7.74□□□□□ -1.17
LINC01550-204ENST00000554822 SCAMP3O14828 347 aaKnown RBP7.74□□□□□ -1.17
LINC01550-204ENST00000554822 DNAJA2O60884 412 aa7.74□□□□□ -1.17
LINC01550-204ENST00000554822 CBX7O95931 251 aa7.74□□□□□ -1.17
LINC01550-204ENST00000554822 AOC3Q16853 763 aa7.74□□□□□ -1.17
LINC01550-204ENST00000554822 NKPD1Q17RQ9 610 aa7.74□□□□□ -1.17
LINC01550-204ENST00000554822 SEZ6Q53EL9 994 aa7.74□□□□□ -1.17
LINC01550-204ENST00000554822 NPM2Q86SE8 214 aaKnown RBP7.74□□□□□ -1.17
LINC01550-204ENST00000554822 WFDC3Q8IUB2 231 aa7.74□□□□□ -1.17
LINC01550-204ENST00000554822 SPACA3Q8IXA5 215 aa7.74□□□□□ -1.17
LINC01550-204ENST00000554822 MISP3Q96FF7 219 aa7.74□□□□□ -1.17
LINC01550-204ENST00000554822 EAF1Q96JC9 268 aaPredicted RBP7.74□□□□□ -1.17
LINC01550-204ENST00000554822 FBXL18Q96ME1 805 aa7.74□□□□□ -1.17
LINC01550-204ENST00000554822 SPON2Q9BUD6 331 aa7.74□□□□□ -1.17
LINC01550-204ENST00000554822 TNKS2Q9H2K2 1166 aa7.74□□□□□ -1.17
LINC01550-204ENST00000554822 PAK6Q9NQU5 681 aaPredicted RBP7.74□□□□□ -1.17
LINC01550-204ENST00000554822 VAV3Q9UKW4 847 aa7.74□□□□□ -1.17
LINC01550-204ENST00000554822 POLA1P09884 1462 aaPredicted RBP7.74□□□□□ -1.17
LINC01550-204ENST00000554822 URB2Q14146 1524 aaKnown RBP7.73□□□□□ -1.17
LINC01550-204ENST00000554822 CLIP1P30622 1438 aa7.73□□□□□ -1.17
LINC01550-204ENST00000554822 YARSP54577 528 aaKnown RBP7.73□□□□□ -1.17
LINC01550-204ENST00000554822 PRKCQQ04759 706 aa7.73□□□□□ -1.17
LINC01550-204ENST00000554822 APOBRQ0VD83 1088 aa7.73□□□□□ -1.17
LINC01550-204ENST00000554822 ZNF746Q6NUN9 644 aaPredicted RBP7.73□□□□□ -1.17
LINC01550-204ENST00000554822 KIAA0825Q8IV33 1275 aa7.73□□□□□ -1.17
LINC01550-204ENST00000554822 ABI1Q8IZP0 508 aa7.73□□□□□ -1.17
LINC01550-204ENST00000554822 STK11IPQ8N1F8 1099 aa7.73□□□□□ -1.17
LINC01550-204ENST00000554822 HRASLS5Q96KN8 279 aa7.73□□□□□ -1.17
LINC01550-204ENST00000554822 CEP131Q9UPN4 1083 aa7.73□□□□□ -1.17
LINC01550-204ENST00000554822 CD8BP10966 210 aa7.72□□□□□ -1.17
LINC01550-204ENST00000554822 MCM4P33991 863 aa7.72□□□□□ -1.17
LINC01550-204ENST00000554822 RACK1P63244 317 aaKnown RBP7.72□□□□□ -1.17
LINC01550-204ENST00000554822 DNAJB8Q8NHS0 232 aa7.72□□□□□ -1.17
LINC01550-204ENST00000554822 PPP1R13LQ8WUF5 828 aa7.72□□□□□ -1.17
LINC01550-204ENST00000554822 NKD1Q969G9 470 aa7.72□□□□□ -1.17
LINC01550-204ENST00000554822 NT5C1AQ9BXI3 368 aa7.72□□□□□ -1.17
LINC01550-204ENST00000554822 KRTAP9-2Q9BYQ4 174 aa7.72□□□□□ -1.17
LINC01550-204ENST00000554822 SNX11Q9Y5W9 270 aa7.72□□□□□ -1.17
LINC01550-204ENST00000554822 CUL7Q14999 1698 aa7.72□□□□□ -1.17
LINC01550-204ENST00000554822 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.71□□□□□ -1.18
LINC01550-204ENST00000554822 FAM155AB1AL88 458 aaPredicted RBP7.71□□□□□ -1.18
LINC01550-204ENST00000554822 ZNF865P0CJ78 1059 aaPredicted RBP7.71□□□□□ -1.18
LINC01550-204ENST00000554822 CLCQ05315 142 aa7.71□□□□□ -1.18
LINC01550-204ENST00000554822 CDKAL1Q5VV42 579 aa7.71□□□□□ -1.18
LINC01550-204ENST00000554822 C9orf131Q5VYM1 1079 aa7.71□□□□□ -1.18
LINC01550-204ENST00000554822 GK5Q6ZS86 529 aa7.71□□□□□ -1.18
LINC01550-204ENST00000554822 METTL16Q86W50 562 aaKnown RBP7.71□□□□□ -1.18
LINC01550-204ENST00000554822 SLFN12Q8IYM2 578 aa7.71□□□□□ -1.18
LINC01550-204ENST00000554822 MFSD4AQ8N468 514 aa7.71□□□□□ -1.18
LINC01550-204ENST00000554822 CYB5D2Q8WUJ1 264 aa7.71□□□□□ -1.18
LINC01550-204ENST00000554822 DDX41Q9UJV9 622 aaKnown RBP7.71□□□□□ -1.18
LINC01550-204ENST00000554822 SLC22A31A6NKX4 558 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms