RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 LRIT3Q3SXY7 679 aa29.52■■■□□ 2.32
FOXA1-204ENST00000554607 TTC6Q86TZ1 520 aa29.52■■■□□ 2.32
FOXA1-204ENST00000554607 CCDC8Q9H0W5 538 aaPredicted RBP29.52■■■□□ 2.32
FOXA1-204ENST00000554607 MYO5AQ9Y4I1 1855 aaKnown RBP29.52■■■□□ 2.32
FOXA1-204ENST00000554607 PFASO15067 1338 aa29.51■■■□□ 2.32
FOXA1-204ENST00000554607 COL6A1P12109 1028 aa29.51■■■□□ 2.31
FOXA1-204ENST00000554607 MIGA1Q8NAN2 632 aa29.51■■■□□ 2.31
FOXA1-204ENST00000554607 CCND3P30281 292 aaPredicted RBP29.5■■■□□ 2.31
FOXA1-204ENST00000554607 MAP3K12Q12852 859 aa29.5■■■□□ 2.31
FOXA1-204ENST00000554607 MAP2K5Q13163 448 aa29.5■■■□□ 2.31
FOXA1-204ENST00000554607 CCL14Q16627 93 aa29.5■■■□□ 2.31
FOXA1-204ENST00000554607 LHX8Q68G74 356 aa29.5■■■□□ 2.31
FOXA1-204ENST00000554607 POTEEQ6S8J3 1075 aa29.5■■■□□ 2.31
FOXA1-204ENST00000554607 FTSJ3Q8IY81 847 aaKnown RBP29.5■■■□□ 2.31
FOXA1-204ENST00000554607 TDHQ8IZJ6 230 aa29.5■■■□□ 2.31
FOXA1-204ENST00000554607 MAGEB6Q8N7X4 407 aa29.5■■■□□ 2.31
FOXA1-204ENST00000554607 EAF2Q96CJ1 260 aaPredicted RBP29.5■■■□□ 2.31
FOXA1-204ENST00000554607 EDC3Q96F86 508 aaKnown RBP29.5■■■□□ 2.31
FOXA1-204ENST00000554607 C1orf115Q9H7X2 142 aa29.5■■■□□ 2.31
FOXA1-204ENST00000554607 RAB3GAP1Q15042 981 aa29.49■■■□□ 2.31
FOXA1-204ENST00000554607 ZYXQ15942 572 aaKnown RBP29.49■■■□□ 2.31
FOXA1-204ENST00000554607 CERKLQ49MI3 558 aaPredicted RBP29.49■■■□□ 2.31
FOXA1-204ENST00000554607 CATSPERGQ6ZRH7 1159 aa29.49■■■□□ 2.31
FOXA1-204ENST00000554607 UBE2OQ9C0C9 1292 aaKnown RBP29.49■■■□□ 2.31
FOXA1-204ENST00000554607 KIAA1683Q9H0B3 1180 aa29.49■■■□□ 2.31
FOXA1-204ENST00000554607 CABP5Q9NP86 173 aa29.49■■■□□ 2.31
FOXA1-204ENST00000554607 TLR7Q9NYK1 1049 aaKnown RBP29.49■■■□□ 2.31
FOXA1-204ENST00000554607 MYH1P12882 1939 aa29.49■■■□□ 2.31
FOXA1-204ENST00000554607 ABCB5Q2M3G0 1257 aa29.48■■■□□ 2.31
FOXA1-204ENST00000554607 MFSD14CQ5VZR4 134 aa29.48■■■□□ 2.31
FOXA1-204ENST00000554607 DLL1O00548 723 aa29.47■■■□□ 2.31
FOXA1-204ENST00000554607 SLC15A5A6NIM6 579 aa29.46■■■□□ 2.31
FOXA1-204ENST00000554607 CNMDO75829 334 aa29.46■■■□□ 2.31
FOXA1-204ENST00000554607 WDR78Q5VTH9 848 aa29.46■■■□□ 2.31
FOXA1-204ENST00000554607 LBX2Q6XYB7 198 aa29.46■■■□□ 2.31
FOXA1-204ENST00000554607 ITPRIPQ8IWB1 547 aa29.46■■■□□ 2.31
FOXA1-204ENST00000554607 DEFB123Q8N688 67 aa29.46■■■□□ 2.31
FOXA1-204ENST00000554607 PTPREP23469 700 aa29.45■■■□□ 2.31
FOXA1-204ENST00000554607 IVNS1ABPQ9Y6Y0 642 aa29.45■■■□□ 2.31
FOXA1-204ENST00000554607 COL6A3P12111 3177 aa29.45■■■□□ 2.3
FOXA1-204ENST00000554607 VCAM1P19320 739 aa29.44■■■□□ 2.3
FOXA1-204ENST00000554607 ERC1Q8IUD2 1116 aa29.44■■■□□ 2.3
FOXA1-204ENST00000554607 MSCO60682 206 aa29.43■■■□□ 2.3
FOXA1-204ENST00000554607 LRRC26Q2I0M4 334 aa29.43■■■□□ 2.3
FOXA1-204ENST00000554607 ACER1Q8TDN7 264 aa29.43■■■□□ 2.3
FOXA1-204ENST00000554607 ANTXR1Q9H6X2 564 aa29.43■■■□□ 2.3
FOXA1-204ENST00000554607 HOXC6P09630 235 aa29.42■■■□□ 2.3
FOXA1-204ENST00000554607 ATP2B2Q01814 1243 aa29.42■■■□□ 2.3
FOXA1-204ENST00000554607 NDUFB9Q9Y6M9 179 aa29.42■■■□□ 2.3
FOXA1-204ENST00000554607 POLR3DP05423 398 aaPredicted RBP29.41■■■□□ 2.3
FOXA1-204ENST00000554607 SHMT1P34896 483 aa29.41■■■□□ 2.3
FOXA1-204ENST00000554607 TTF1Q15361 905 aaPredicted RBP29.41■■■□□ 2.3
FOXA1-204ENST00000554607 RPAP3Q9H6T3 665 aaPredicted RBP29.41■■■□□ 2.3
FOXA1-204ENST00000554607 DDX20Q9UHI6 824 aaKnown RBP29.41■■■□□ 2.3
FOXA1-204ENST00000554607 PLCD1P51178 756 aa29.4■■■□□ 2.3
FOXA1-204ENST00000554607 GRB14Q14449 540 aa29.4■■■□□ 2.3
FOXA1-204ENST00000554607 AACSQ86V21 672 aa29.4■■■□□ 2.3
FOXA1-204ENST00000554607 RIOK1Q9BRS2 568 aaKnown RBP29.4■■■□□ 2.3
FOXA1-204ENST00000554607 FLRT1Q9NZU1 646 aa29.4■■■□□ 2.3
FOXA1-204ENST00000554607 BTBD7Q9P203 1132 aa29.4■■■□□ 2.3
FOXA1-204ENST00000554607 MAGEB6P1A0A0J9YX57 407 aa29.39■■■□□ 2.3
FOXA1-204ENST00000554607 SPDYE16A6NNV3 312 aaPredicted RBP29.39■■■□□ 2.3
FOXA1-204ENST00000554607 CEP85Q6P2H3 762 aa29.39■■■□□ 2.3
FOXA1-204ENST00000554607 LPAR1Q92633 364 aa29.39■■■□□ 2.3
FOXA1-204ENST00000554607 SENP6Q9GZR1 1112 aaPredicted RBP29.39■■■□□ 2.3
FOXA1-204ENST00000554607 HOXC10Q9NYD6 342 aa29.39■■■□□ 2.3
FOXA1-204ENST00000554607 STXBP5LQ9Y2K9 1186 aa29.39■■■□□ 2.3
FOXA1-204ENST00000554607 CNGA1P29973 690 aa29.38■■■□□ 2.29
FOXA1-204ENST00000554607 HSP90AB4PQ58FF6 505 aa29.38■■■□□ 2.29
FOXA1-204ENST00000554607 Q7L0L9 218 aa29.38■■■□□ 2.29
FOXA1-204ENST00000554607 CRNKL1Q9BZJ0 848 aaKnown RBP29.38■■■□□ 2.29
FOXA1-204ENST00000554607 RLBP1P12271 317 aa29.37■■■□□ 2.29
FOXA1-204ENST00000554607 GUCY1A2P33402 732 aa29.37■■■□□ 2.29
FOXA1-204ENST00000554607 MDM2Q00987 491 aaPredicted RBP29.37■■■□□ 2.29
FOXA1-204ENST00000554607 MTMR10Q9NXD2 777 aa29.37■■■□□ 2.29
FOXA1-204ENST00000554607 EXOC6BQ9Y2D4 811 aa29.37■■■□□ 2.29
FOXA1-204ENST00000554607 STRNO43815 780 aa29.36■■■□□ 2.29
FOXA1-204ENST00000554607 GABPAQ06546 454 aa29.36■■■□□ 2.29
FOXA1-204ENST00000554607 COG2Q14746 738 aa29.36■■■□□ 2.29
FOXA1-204ENST00000554607 SEPT2Q15019 361 aa29.36■■■□□ 2.29
FOXA1-204ENST00000554607 NPLOC4Q8TAT6 608 aa29.36■■■□□ 2.29
FOXA1-204ENST00000554607 LBHD1Q9BQE6 289 aaPredicted RBP29.36■■■□□ 2.29
FOXA1-204ENST00000554607 DNM1LO00429 736 aa29.35■■■□□ 2.29
FOXA1-204ENST00000554607 SLC9C2Q5TAH2 1124 aa29.35■■■□□ 2.29
FOXA1-204ENST00000554607 DPP9Q86TI2 863 aa29.35■■■□□ 2.29
FOXA1-204ENST00000554607 MCM9Q9NXL9 1143 aa29.35■■■□□ 2.29
FOXA1-204ENST00000554607 MPHOSPH10O00566 681 aaKnown RBP29.34■■■□□ 2.29
FOXA1-204ENST00000554607 CYP2C19P33261 490 aa29.34■■■□□ 2.29
FOXA1-204ENST00000554607 A0A0C4DFX4 3053 aa29.34■■■□□ 2.29
FOXA1-204ENST00000554607 PRKAG2Q9UGJ0 569 aa29.33■■■□□ 2.29
FOXA1-204ENST00000554607 FRMPD3Q5JV73 1810 aa29.33■■■□□ 2.29
FOXA1-204ENST00000554607 PDE6AP16499 860 aa29.32■■■□□ 2.28
FOXA1-204ENST00000554607 OLFML2BQ68BL8 750 aa29.32■■■□□ 2.28
FOXA1-204ENST00000554607 ARRDC4Q8NCT1 418 aa29.32■■■□□ 2.28
FOXA1-204ENST00000554607 SHCBP1Q8NEM2 672 aa29.32■■■□□ 2.28
FOXA1-204ENST00000554607 MOV10L1Q9BXT6 1211 aaKnown RBP29.32■■■□□ 2.28
FOXA1-204ENST00000554607 TANGO6Q9C0B7 1094 aa29.32■■■□□ 2.28
FOXA1-204ENST00000554607 SLC5A4Q9NY91 659 aa29.32■■■□□ 2.28
FOXA1-204ENST00000554607 A0A1W2PRG0 241 aa29.31■■■□□ 2.28
FOXA1-204ENST00000554607 IGHA2P01877 340 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms