RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 USP17L24Q0WX57 530 aa10.48□□□□□ -0.73
ACTN1-213ENST00000554508 IRF5Q13568 498 aa10.48□□□□□ -0.73
ACTN1-213ENST00000554508 ANKRD45Q5TZF3 282 aa10.48□□□□□ -0.73
ACTN1-213ENST00000554508 GIMAP6Q6P9H5 292 aa10.48□□□□□ -0.73
ACTN1-213ENST00000554508 SLAIN1Q8ND83 568 aa10.48□□□□□ -0.73
ACTN1-213ENST00000554508 PI4K2BQ8TCG2 481 aa10.48□□□□□ -0.73
ACTN1-213ENST00000554508 SH3TC2Q8TF17 1288 aa10.48□□□□□ -0.73
ACTN1-213ENST00000554508 APPBP2Q92624 585 aa10.48□□□□□ -0.73
ACTN1-213ENST00000554508 CCDC17Q96LX7 622 aa10.48□□□□□ -0.73
ACTN1-213ENST00000554508 STRBPQ96SI9 672 aaKnown RBP10.48□□□□□ -0.73
ACTN1-213ENST00000554508 FEZ1Q99689 392 aa10.48□□□□□ -0.73
ACTN1-213ENST00000554508 KIAA1683Q9H0B3 1180 aa10.48□□□□□ -0.73
ACTN1-213ENST00000554508 CHGBP05060 677 aa10.47□□□□□ -0.73
ACTN1-213ENST00000554508 CYP2D6P10635 497 aa10.47□□□□□ -0.73
ACTN1-213ENST00000554508 GNAT2P19087 354 aa10.47□□□□□ -0.73
ACTN1-213ENST00000554508 MX1P20591 662 aa10.47□□□□□ -0.73
ACTN1-213ENST00000554508 GUCY1A2P33402 732 aa10.47□□□□□ -0.73
ACTN1-213ENST00000554508 CDK8P49336 464 aa10.47□□□□□ -0.73
ACTN1-213ENST00000554508 FLT3LGP49771 235 aa10.47□□□□□ -0.73
ACTN1-213ENST00000554508 HERVK_113P62684 666 aa10.47□□□□□ -0.73
ACTN1-213ENST00000554508 IRX6P78412 446 aaPredicted RBP10.47□□□□□ -0.73
ACTN1-213ENST00000554508 PRKCZQ05513 592 aa10.47□□□□□ -0.73
ACTN1-213ENST00000554508 SEPT2Q15019 361 aa10.47□□□□□ -0.73
ACTN1-213ENST00000554508 SBK1Q52WX2 424 aa10.47□□□□□ -0.73
ACTN1-213ENST00000554508 TSHZ3Q63HK5 1081 aa10.47□□□□□ -0.73
ACTN1-213ENST00000554508 TMEM179Q6ZVK1 233 aa10.47□□□□□ -0.73
ACTN1-213ENST00000554508 C16orf86Q6ZW13 317 aa10.47□□□□□ -0.73
ACTN1-213ENST00000554508 PXYLP1Q8TE99 480 aa10.47□□□□□ -0.73
ACTN1-213ENST00000554508 ARPP21Q9UBL0 812 aaPredicted RBP10.47□□□□□ -0.73
ACTN1-213ENST00000554508 BIN2Q9UBW5 565 aaPredicted RBP10.47□□□□□ -0.73
ACTN1-213ENST00000554508 GABRQQ9UN88 632 aa10.47□□□□□ -0.73
ACTN1-213ENST00000554508 TNRC18O15417 2968 aaPredicted RBP10.47□□□□□ -0.73
ACTN1-213ENST00000554508 GSG1L2A8MUP6 293 aa10.46□□□□□ -0.73
ACTN1-213ENST00000554508 ADCY3O60266 1144 aa10.46□□□□□ -0.73
ACTN1-213ENST00000554508 CAPN2P17655 700 aa10.46□□□□□ -0.73
ACTN1-213ENST00000554508 EVX2Q03828 476 aa10.46□□□□□ -0.73
ACTN1-213ENST00000554508 ZYXQ15942 572 aaKnown RBP10.46□□□□□ -0.73
ACTN1-213ENST00000554508 CTR9Q6PD62 1173 aa10.46□□□□□ -0.73
ACTN1-213ENST00000554508 CATSPERGQ6ZRH7 1159 aa10.46□□□□□ -0.73
ACTN1-213ENST00000554508 GPRC5AQ8NFJ5 357 aa10.46□□□□□ -0.73
ACTN1-213ENST00000554508 ACER1Q8TDN7 264 aa10.46□□□□□ -0.73
ACTN1-213ENST00000554508 OSBP2Q969R2 916 aa10.46□□□□□ -0.73
ACTN1-213ENST00000554508 DYNLL2Q96FJ2 89 aa10.46□□□□□ -0.73
ACTN1-213ENST00000554508 RWDD1Q9H446 243 aaPredicted RBP10.46□□□□□ -0.73
ACTN1-213ENST00000554508 ARHGEF10LQ9HCE6 1279 aa10.46□□□□□ -0.73
ACTN1-213ENST00000554508 RBPJLQ9UBG7 517 aa10.46□□□□□ -0.73
ACTN1-213ENST00000554508 STAP2Q9UGK3 403 aa10.46□□□□□ -0.73
ACTN1-213ENST00000554508 PLXNB2O15031 1838 aa10.46□□□□□ -0.74
ACTN1-213ENST00000554508 SALL3Q9BXA9 1300 aa10.45□□□□□ -0.74
ACTN1-213ENST00000554508 CYP2D7A0A087X1C5 515 aa10.45□□□□□ -0.74
ACTN1-213ENST00000554508 PATL2C9JE40 543 aaKnown RBP10.45□□□□□ -0.74
ACTN1-213ENST00000554508 GPAA1O43292 621 aa10.45□□□□□ -0.74
ACTN1-213ENST00000554508 EN2P19622 333 aaPredicted RBP10.45□□□□□ -0.74
ACTN1-213ENST00000554508 MAPK4P31152 587 aa10.45□□□□□ -0.74
ACTN1-213ENST00000554508 ERVK-9P63128 1117 aa10.45□□□□□ -0.74
ACTN1-213ENST00000554508 ERVK-24P63145 666 aa10.45□□□□□ -0.74
ACTN1-213ENST00000554508 LBX2Q6XYB7 198 aa10.45□□□□□ -0.74
ACTN1-213ENST00000554508 TICAM2Q86XR7 235 aa10.45□□□□□ -0.74
ACTN1-213ENST00000554508 SLC44A5Q8NCS7 719 aa10.45□□□□□ -0.74
ACTN1-213ENST00000554508 NKX2-3Q8TAU0 364 aa10.45□□□□□ -0.74
ACTN1-213ENST00000554508 OTUD7AQ8TE49 926 aaPredicted RBP10.45□□□□□ -0.74
ACTN1-213ENST00000554508 FSD1Q9BTV5 496 aa10.45□□□□□ -0.74
ACTN1-213ENST00000554508 SH2D4AQ9H788 454 aa10.45□□□□□ -0.74
ACTN1-213ENST00000554508 HOXC10Q9NYD6 342 aa10.45□□□□□ -0.74
ACTN1-213ENST00000554508 GJD2Q9UKL4 321 aa10.45□□□□□ -0.74
ACTN1-213ENST00000554508 RABGAP1Q9Y3P9 1069 aa10.45□□□□□ -0.74
ACTN1-213ENST00000554508 A0A1W2PRG0 241 aa10.44□□□□□ -0.74
ACTN1-213ENST00000554508 GJB1P08034 283 aa10.44□□□□□ -0.74
ACTN1-213ENST00000554508 CCL5P13501 91 aa10.44□□□□□ -0.74
ACTN1-213ENST00000554508 AKR1B1P15121 316 aa10.44□□□□□ -0.74
ACTN1-213ENST00000554508 VCAM1P19320 739 aa10.44□□□□□ -0.74
ACTN1-213ENST00000554508 PDE1AP54750 535 aa10.44□□□□□ -0.74
ACTN1-213ENST00000554508 CCNA1P78396 465 aa10.44□□□□□ -0.74
ACTN1-213ENST00000554508 MTFR1Q15390 333 aa10.44□□□□□ -0.74
ACTN1-213ENST00000554508 ZMYM1Q5SVZ6 1142 aa10.44□□□□□ -0.74
ACTN1-213ENST00000554508 CCAR1Q8IX12 1150 aaKnown RBP10.44□□□□□ -0.74
ACTN1-213ENST00000554508 LPAR1Q92633 364 aa10.44□□□□□ -0.74
ACTN1-213ENST00000554508 EVI5LQ96CN4 794 aa10.44□□□□□ -0.74
ACTN1-213ENST00000554508 PAGR1Q9BTK6 254 aa10.44□□□□□ -0.74
ACTN1-213ENST00000554508 NACAP1Q9BZK3 213 aa10.44□□□□□ -0.74
ACTN1-213ENST00000554508 KANSL2Q9H9L4 492 aa10.44□□□□□ -0.74
ACTN1-213ENST00000554508 ZNF287Q9HBT7 754 aa10.44□□□□□ -0.74
ACTN1-213ENST00000554508 TXNRD2Q9NNW7 524 aa10.44□□□□□ -0.74
ACTN1-213ENST00000554508 TMX2Q9Y320 296 aa10.44□□□□□ -0.74
ACTN1-213ENST00000554508 RLFQ13129 1914 aa10.44□□□□□ -0.74
ACTN1-213ENST00000554508 GREB1LQ9C091 1923 aaPredicted RBP10.44□□□□□ -0.74
ACTN1-213ENST00000554508 ZNFX1Q9P2E3 1918 aaKnown RBP10.44□□□□□ -0.74
ACTN1-213ENST00000554508 MYH4Q9Y623 1939 aa10.44□□□□□ -0.74
ACTN1-213ENST00000554508 BRCA2P51587 3418 aa10.44□□□□□ -0.74
ACTN1-213ENST00000554508 PARP14Q460N5 1801 aa10.43□□□□□ -0.74
ACTN1-213ENST00000554508 MINDY4BA8MYZ0 360 aa10.43□□□□□ -0.74
ACTN1-213ENST00000554508 M0R2C6 588 aa10.43□□□□□ -0.74
ACTN1-213ENST00000554508 MYCP01106 439 aaPredicted RBP10.43□□□□□ -0.74
ACTN1-213ENST00000554508 APPP05067 770 aa10.43□□□□□ -0.74
ACTN1-213ENST00000554508 ELNP15502 786 aa10.43□□□□□ -0.74
ACTN1-213ENST00000554508 TDO2P48775 406 aa10.43□□□□□ -0.74
ACTN1-213ENST00000554508 ICA1Q05084 483 aa10.43□□□□□ -0.74
ACTN1-213ENST00000554508 COG2Q14746 738 aa10.43□□□□□ -0.74
ACTN1-213ENST00000554508 Q3C1V9 767 aa10.43□□□□□ -0.74
ACTN1-213ENST00000554508 SMC5Q8IY18 1101 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms