RNA–Protein interactions for RNA: ENST00000554423.1

IFT43-208, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-208ENST00000554423 XAGE3Q8WTP9 111 aa4.07□□□□□ -1.76
IFT43-208ENST00000554423 SYTL4Q96C24 671 aaPredicted RBP4.07□□□□□ -1.76
IFT43-208ENST00000554423 RHOVQ96L33 236 aa4.07□□□□□ -1.76
IFT43-208ENST00000554423 TRIT1Q9H3H1 467 aaKnown RBP4.07□□□□□ -1.76
IFT43-208ENST00000554423 METTL5Q9NRN9 209 aaKnown RBP4.07□□□□□ -1.76
IFT43-208ENST00000554423 KBTBD4Q9NVX7 518 aa4.07□□□□□ -1.76
IFT43-208ENST00000554423 TJP2Q9UDY2 1190 aa4.07□□□□□ -1.76
IFT43-208ENST00000554423 PRR36Q9H6K5 1346 aa4.06□□□□□ -1.76
IFT43-208ENST00000554423 HTR3BO95264 441 aa4.06□□□□□ -1.76
IFT43-208ENST00000554423 CD8BP10966 210 aa4.06□□□□□ -1.76
IFT43-208ENST00000554423 ZNF165P49910 485 aa4.06□□□□□ -1.76
IFT43-208ENST00000554423 FAM160A1Q05DH4 1040 aa4.06□□□□□ -1.76
IFT43-208ENST00000554423 PKN1Q16512 942 aa4.06□□□□□ -1.76
IFT43-208ENST00000554423 REC114Q7Z4M0 266 aa4.06□□□□□ -1.76
IFT43-208ENST00000554423 SPRED2Q7Z698 418 aa4.06□□□□□ -1.76
IFT43-208ENST00000554423 UBE3DQ7Z6J8 389 aa4.06□□□□□ -1.76
IFT43-208ENST00000554423 CDH24Q86UP0 819 aa4.06□□□□□ -1.76
IFT43-208ENST00000554423 SPACA3Q8IXA5 215 aa4.06□□□□□ -1.76
IFT43-208ENST00000554423 CYB5D2Q8WUJ1 264 aa4.06□□□□□ -1.76
IFT43-208ENST00000554423 ZNF296Q8WUU4 475 aaPredicted RBP4.06□□□□□ -1.76
IFT43-208ENST00000554423 CCDC74BQ96LY2 380 aa4.06□□□□□ -1.76
IFT43-208ENST00000554423 ASCC2Q9H1I8 757 aaPredicted RBP4.06□□□□□ -1.76
IFT43-208ENST00000554423 GPATCH2Q9NW75 528 aa4.06□□□□□ -1.76
IFT43-208ENST00000554423 PLAGL2Q9UPG8 496 aa4.06□□□□□ -1.76
IFT43-208ENST00000554423 F6X3S4 739 aa4.05□□□□□ -1.76
IFT43-208ENST00000554423 GBP1P32455 592 aa4.05□□□□□ -1.76
IFT43-208ENST00000554423 MCM4P33991 863 aa4.05□□□□□ -1.76
IFT43-208ENST00000554423 ZP2Q05996 745 aa4.05□□□□□ -1.76
IFT43-208ENST00000554423 RAD51AP2Q09MP3 1159 aa4.05□□□□□ -1.76
IFT43-208ENST00000554423 APOBRQ0VD83 1088 aa4.05□□□□□ -1.76
IFT43-208ENST00000554423 NKPD1Q17RQ9 610 aa4.05□□□□□ -1.76
IFT43-208ENST00000554423 ZNF792Q3KQV3 632 aa4.05□□□□□ -1.76
IFT43-208ENST00000554423 CDKAL1Q5VV42 579 aa4.05□□□□□ -1.76
IFT43-208ENST00000554423 TMPRSS7Q7RTY8 843 aa4.05□□□□□ -1.76
IFT43-208ENST00000554423 ATG4DQ86TL0 474 aaPredicted RBP4.05□□□□□ -1.76
IFT43-208ENST00000554423 SLFN12Q8IYM2 578 aa4.05□□□□□ -1.76
IFT43-208ENST00000554423 PHACTR4Q8IZ21 702 aa4.05□□□□□ -1.76
IFT43-208ENST00000554423 REXO1Q8N1G1 1221 aaKnown RBP4.05□□□□□ -1.76
IFT43-208ENST00000554423 RNF34Q969K3 372 aa4.05□□□□□ -1.76
IFT43-208ENST00000554423 ACSF2Q96CM8 615 aaPredicted RBP4.05□□□□□ -1.76
IFT43-208ENST00000554423 LRRC3Q9BY71 257 aa4.05□□□□□ -1.76
IFT43-208ENST00000554423 KCNQ5Q9NR82 932 aa4.05□□□□□ -1.76
IFT43-208ENST00000554423 REV1Q9UBZ9 1251 aa4.05□□□□□ -1.76
IFT43-208ENST00000554423 CAPN6Q9Y6Q1 641 aa4.05□□□□□ -1.76
IFT43-208ENST00000554423 SCAMP3O14828 347 aaKnown RBP4.04□□□□□ -1.76
IFT43-208ENST00000554423 TLR3O15455 904 aaKnown RBP4.04□□□□□ -1.76
IFT43-208ENST00000554423 GREM1O60565 184 aa4.04□□□□□ -1.76
IFT43-208ENST00000554423 IMPDH2P12268 514 aa4.04□□□□□ -1.76
IFT43-208ENST00000554423 RAG1P15918 1043 aa4.04□□□□□ -1.76
IFT43-208ENST00000554423 VAMP1P23763 118 aa4.04□□□□□ -1.76
IFT43-208ENST00000554423 BUD31P41223 144 aaPredicted RBP4.04□□□□□ -1.76
IFT43-208ENST00000554423 AFMP43652 599 aa4.04□□□□□ -1.76
IFT43-208ENST00000554423 RNF4P78317 190 aa4.04□□□□□ -1.76
IFT43-208ENST00000554423 FBXL19Q6PCT2 694 aa4.04□□□□□ -1.76
IFT43-208ENST00000554423 ZNF574Q6ZN55 896 aaPredicted RBP4.04□□□□□ -1.76
IFT43-208ENST00000554423 CBLL1Q75N03 491 aa4.04□□□□□ -1.76
IFT43-208ENST00000554423 KIAA0825Q8IV33 1275 aa4.04□□□□□ -1.76
IFT43-208ENST00000554423 RIN3Q8TB24 985 aa4.04□□□□□ -1.76
IFT43-208ENST00000554423 NKD1Q969G9 470 aa4.04□□□□□ -1.76
IFT43-208ENST00000554423 UBE2FQ969M7 185 aa4.04□□□□□ -1.76
IFT43-208ENST00000554423 SPATA32Q96LK8 384 aa4.04□□□□□ -1.76
IFT43-208ENST00000554423 HSPA12BQ96MM6 686 aa4.04□□□□□ -1.76
IFT43-208ENST00000554423 DPH2Q9BQC3 489 aaPredicted RBP4.04□□□□□ -1.76
IFT43-208ENST00000554423 SPON2Q9BUD6 331 aa4.04□□□□□ -1.76
IFT43-208ENST00000554423 NT5C1AQ9BXI3 368 aa4.04□□□□□ -1.76
IFT43-208ENST00000554423 ASPNQ9BXN1 380 aa4.04□□□□□ -1.76
IFT43-208ENST00000554423 KRTAP9-3Q9BYQ3 159 aa4.04□□□□□ -1.76
IFT43-208ENST00000554423 BACH2Q9BYV9 841 aa4.04□□□□□ -1.76
IFT43-208ENST00000554423 RC3H2Q9HBD1 1191 aaKnown RBP4.04□□□□□ -1.76
IFT43-208ENST00000554423 COPRSQ9NQ92 184 aa4.04□□□□□ -1.76
IFT43-208ENST00000554423 GMIPQ9P107 970 aa4.04□□□□□ -1.76
IFT43-208ENST00000554423 KLHL3Q9UH77 587 aa4.04□□□□□ -1.76
IFT43-208ENST00000554423 CCDC9Q9Y3X0 531 aaKnown RBP4.04□□□□□ -1.76
IFT43-208ENST00000554423 PCDHB14Q9Y5E9 798 aa4.04□□□□□ -1.76
IFT43-208ENST00000554423 CORINQ9Y5Q5 1042 aa4.04□□□□□ -1.76
IFT43-208ENST00000554423 PITPNM2Q9BZ72 1349 aa4.03□□□□□ -1.76
IFT43-208ENST00000554423 H3BS24 57 aa4.03□□□□□ -1.76
IFT43-208ENST00000554423 GRIN3BO60391 1043 aa4.03□□□□□ -1.76
IFT43-208ENST00000554423 ATE1O95260 518 aa4.03□□□□□ -1.76
IFT43-208ENST00000554423 CCNFP41002 786 aa4.03□□□□□ -1.76
IFT43-208ENST00000554423 SEZ6Q53EL9 994 aa4.03□□□□□ -1.76
IFT43-208ENST00000554423 DNAJB8Q8NHS0 232 aa4.03□□□□□ -1.76
IFT43-208ENST00000554423 RNF141Q8WVD5 230 aa4.03□□□□□ -1.76
IFT43-208ENST00000554423 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.03□□□□□ -1.76
IFT43-208ENST00000554423 EHMT1Q9H9B1 1298 aa4.03□□□□□ -1.76
IFT43-208ENST00000554423 BRMS1Q9HCU9 246 aa4.03□□□□□ -1.76
IFT43-208ENST00000554423 ZSWIM5Q9P217 1185 aa4.03□□□□□ -1.76
IFT43-208ENST00000554423 UPK3BL1B0FP48 263 aa4.02□□□□□ -1.77
IFT43-208ENST00000554423 UPK3BL2E5RIL1 263 aa4.02□□□□□ -1.77
IFT43-208ENST00000554423 RGS13O14921 159 aa4.02□□□□□ -1.77
IFT43-208ENST00000554423 RAC2P15153 192 aa4.02□□□□□ -1.77
IFT43-208ENST00000554423 ITGB5P18084 799 aa4.02□□□□□ -1.77
IFT43-208ENST00000554423 GARTP22102 1010 aa4.02□□□□□ -1.77
IFT43-208ENST00000554423 TRIM26Q12899 539 aaPredicted RBP4.02□□□□□ -1.77
IFT43-208ENST00000554423 CLEC16AQ2KHT3 1053 aa4.02□□□□□ -1.77
IFT43-208ENST00000554423 NFXL1Q6ZNB6 911 aa4.02□□□□□ -1.77
IFT43-208ENST00000554423 USP48Q86UV5 1035 aa4.02□□□□□ -1.77
IFT43-208ENST00000554423 ZNF654Q8IZM8 581 aa4.02□□□□□ -1.77
IFT43-208ENST00000554423 ENOX1Q8TC92 643 aaKnown RBP4.02□□□□□ -1.77
IFT43-208ENST00000554423 GPR62Q9BZJ7 368 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms