RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 GOLGA8AA7E2F4 631 aa8.94□□□□□ -0.98
TDP1-209ENST00000554180 CPLX1O14810 134 aa8.94□□□□□ -0.98
TDP1-209ENST00000554180 NMT2O60551 498 aa8.94□□□□□ -0.98
TDP1-209ENST00000554180 TTLL1O95922 423 aa8.94□□□□□ -0.98
TDP1-209ENST00000554180 TOP1P11387 765 aaKnown RBP8.94□□□□□ -0.98
TDP1-209ENST00000554180 AKR1B1P15121 316 aa8.94□□□□□ -0.98
TDP1-209ENST00000554180 PDCP20941 246 aa8.94□□□□□ -0.98
TDP1-209ENST00000554180 EPHX2P34913 555 aa8.94□□□□□ -0.98
TDP1-209ENST00000554180 TROAPQ12815 778 aa8.94□□□□□ -0.98
TDP1-209ENST00000554180 STK3Q13188 491 aa8.94□□□□□ -0.98
TDP1-209ENST00000554180 DCAF15Q66K64 600 aa8.94□□□□□ -0.98
TDP1-209ENST00000554180 CPLX2Q6PUV4 134 aaKnown RBP8.94□□□□□ -0.98
TDP1-209ENST00000554180 MICU3Q86XE3 530 aa8.94□□□□□ -0.98
TDP1-209ENST00000554180 NECAB1Q8N987 351 aa8.94□□□□□ -0.98
TDP1-209ENST00000554180 SMARCC2Q8TAQ2 1214 aa8.94□□□□□ -0.98
TDP1-209ENST00000554180 DCPSQ96C86 337 aaKnown RBP8.94□□□□□ -0.98
TDP1-209ENST00000554180 CEP95Q96GE4 821 aa8.94□□□□□ -0.98
TDP1-209ENST00000554180 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.94□□□□□ -0.98
TDP1-209ENST00000554180 KANSL2Q9H9L4 492 aa8.94□□□□□ -0.98
TDP1-209ENST00000554180 SENP2Q9HC62 589 aa8.94□□□□□ -0.98
TDP1-209ENST00000554180 CABP5Q9NP86 173 aa8.94□□□□□ -0.98
TDP1-209ENST00000554180 RBM28Q9NW13 759 aaKnown RBP8.94□□□□□ -0.98
TDP1-209ENST00000554180 CHMP5Q9NZZ3 219 aa8.94□□□□□ -0.98
TDP1-209ENST00000554180 NAP1L2Q9ULW6 460 aaPredicted RBP8.94□□□□□ -0.98
TDP1-209ENST00000554180 STX8Q9UNK0 236 aa8.94□□□□□ -0.98
TDP1-209ENST00000554180 SMC3Q9UQE7 1217 aa8.94□□□□□ -0.98
TDP1-209ENST00000554180 ASTN2O75129 1339 aaPredicted RBP8.94□□□□□ -0.98
TDP1-209ENST00000554180 GREB1LQ9C091 1923 aaPredicted RBP8.93□□□□□ -0.98
TDP1-209ENST00000554180 KIF5BP33176 963 aa8.93□□□□□ -0.98
TDP1-209ENST00000554180 RTN1Q16799 776 aa8.93□□□□□ -0.98
TDP1-209ENST00000554180 ABCB5Q2M3G0 1257 aa8.93□□□□□ -0.98
TDP1-209ENST00000554180 SUPT20HL1Q3ZLR7 823 aa8.93□□□□□ -0.98
TDP1-209ENST00000554180 SULF1Q8IWU6 871 aa8.93□□□□□ -0.98
TDP1-209ENST00000554180 FANCBQ8NB91 859 aa8.93□□□□□ -0.98
TDP1-209ENST00000554180 SPRYD3Q8NCJ5 442 aa8.93□□□□□ -0.98
TDP1-209ENST00000554180 PNMA1Q8ND90 353 aa8.93□□□□□ -0.98
TDP1-209ENST00000554180 RGS22Q8NE09 1264 aa8.93□□□□□ -0.98
TDP1-209ENST00000554180 NSUN7Q8NE18 718 aaKnown RBP8.93□□□□□ -0.98
TDP1-209ENST00000554180 TAF1DQ9H5J8 278 aaPredicted RBP8.93□□□□□ -0.98
TDP1-209ENST00000554180 NYAP2Q9P242 653 aa8.93□□□□□ -0.98
TDP1-209ENST00000554180 STK36Q9NRP7 1315 aa8.92□□□□□ -0.98
TDP1-209ENST00000554180 PTPDC1A2A3K4 754 aa8.92□□□□□ -0.98
TDP1-209ENST00000554180 FAM196BA6NMK8 535 aa8.92□□□□□ -0.98
TDP1-209ENST00000554180 MPHOSPH10O00566 681 aaKnown RBP8.92□□□□□ -0.98
TDP1-209ENST00000554180 ASNSP08243 561 aa8.92□□□□□ -0.98
TDP1-209ENST00000554180 IFNAR1P17181 557 aa8.92□□□□□ -0.98
TDP1-209ENST00000554180 GJB2P29033 226 aa8.92□□□□□ -0.98
TDP1-209ENST00000554180 CAP2P40123 477 aa8.92□□□□□ -0.98
TDP1-209ENST00000554180 GNAQP50148 359 aa8.92□□□□□ -0.98
TDP1-209ENST00000554180 CCT2P78371 535 aaKnown RBP8.92□□□□□ -0.98
TDP1-209ENST00000554180 NUCB2P80303 420 aa8.92□□□□□ -0.98
TDP1-209ENST00000554180 ICA1Q05084 483 aa8.92□□□□□ -0.98
TDP1-209ENST00000554180 CDAN1Q8IWY9 1227 aa8.92□□□□□ -0.98
TDP1-209ENST00000554180 PIAS4Q8N2W9 510 aaPredicted RBP8.92□□□□□ -0.98
TDP1-209ENST00000554180 CTCFLQ8NI51 663 aaPredicted RBP8.92□□□□□ -0.98
TDP1-209ENST00000554180 MKL1Q969V6 931 aa8.92□□□□□ -0.98
TDP1-209ENST00000554180 TMEM47Q9BQJ4 181 aa8.92□□□□□ -0.98
TDP1-209ENST00000554180 ZNF341Q9BYN7 854 aa8.92□□□□□ -0.98
TDP1-209ENST00000554180 NCOA5Q9HCD5 579 aaKnown RBP8.92□□□□□ -0.98
TDP1-209ENST00000554180 FOXD4L1Q9NU39 408 aa8.92□□□□□ -0.98
TDP1-209ENST00000554180 ZBTB21Q9ULJ3 1066 aa8.92□□□□□ -0.98
TDP1-209ENST00000554180 PHF20L1A8MW92 1017 aa8.91□□□□□ -0.98
TDP1-209ENST00000554180 POTECB2RU33 542 aa8.91□□□□□ -0.98
TDP1-209ENST00000554180 CTNND1O60716 968 aaKnown RBP8.91□□□□□ -0.98
TDP1-209ENST00000554180 GDF11O95390 407 aa8.91□□□□□ -0.98
TDP1-209ENST00000554180 CTDNEP1O95476 244 aa8.91□□□□□ -0.98
TDP1-209ENST00000554180 GH2P01242 217 aa8.91□□□□□ -0.98
TDP1-209ENST00000554180 SNHG28P0DPA3 235 aa8.91□□□□□ -0.98
TDP1-209ENST00000554180 CDC27P30260 824 aa8.91□□□□□ -0.98
TDP1-209ENST00000554180 GUCY1A2P33402 732 aa8.91□□□□□ -0.98
TDP1-209ENST00000554180 GRM4Q14833 912 aa8.91□□□□□ -0.98
TDP1-209ENST00000554180 NTRK3Q16288 839 aa8.91□□□□□ -0.98
TDP1-209ENST00000554180 NBPF12Q5TAG4 269 aaPredicted RBP8.91□□□□□ -0.98
TDP1-209ENST00000554180 MIGA2Q7L4E1 593 aa8.91□□□□□ -0.98
TDP1-209ENST00000554180 KRT26Q7Z3Y9 468 aa8.91□□□□□ -0.98
TDP1-209ENST00000554180 TRIM22Q8IYM9 498 aa8.91□□□□□ -0.98
TDP1-209ENST00000554180 NUP133Q8WUM0 1156 aa8.91□□□□□ -0.98
TDP1-209ENST00000554180 LZTS2Q9BRK4 669 aa8.91□□□□□ -0.98
TDP1-209ENST00000554180 MYL10Q9BUA6 226 aa8.91□□□□□ -0.98
TDP1-209ENST00000554180 SH2D4AQ9H788 454 aa8.91□□□□□ -0.98
TDP1-209ENST00000554180 FAM217BQ9NTX9 383 aaPredicted RBP8.91□□□□□ -0.98
TDP1-209ENST00000554180 RBM27Q9P2N5 1060 aaKnown RBP8.91□□□□□ -0.98
TDP1-209ENST00000554180 ZNF112Q9UJU3 913 aa8.91□□□□□ -0.98
TDP1-209ENST00000554180 MYH8P13535 1937 aa8.91□□□□□ -0.98
TDP1-209ENST00000554180 SSC5DA1L4H1 1573 aa8.9□□□□□ -0.98
TDP1-209ENST00000554180 WDR33Q9C0J8 1336 aaKnown RBP8.9□□□□□ -0.98
TDP1-209ENST00000554180 JAK2O60674 1132 aa8.9□□□□□ -0.98
TDP1-209ENST00000554180 SLURP2P0DP57 97 aa8.9□□□□□ -0.98
TDP1-209ENST00000554180 VEGFAP15692 232 aaPredicted RBP8.9□□□□□ -0.98
TDP1-209ENST00000554180 RXRAP19793 462 aa8.9□□□□□ -0.98
TDP1-209ENST00000554180 SMARCA1P28370 1054 aa8.9□□□□□ -0.98
TDP1-209ENST00000554180 ADD1P35611 737 aaKnown RBP8.9□□□□□ -0.98
TDP1-209ENST00000554180 RRP1BQ14684 758 aaKnown RBP8.9□□□□□ -0.98
TDP1-209ENST00000554180 SEPT2Q15019 361 aa8.9□□□□□ -0.98
TDP1-209ENST00000554180 ASPRV1Q53RT3 343 aa8.9□□□□□ -0.98
TDP1-209ENST00000554180 GPATCH4Q5T3I0 446 aaKnown RBP8.9□□□□□ -0.98
TDP1-209ENST00000554180 TMTC3Q6ZXV5 915 aa8.9□□□□□ -0.98
TDP1-209ENST00000554180 CDC37L1Q7L3B6 337 aa8.9□□□□□ -0.98
TDP1-209ENST00000554180 FAM184AQ8NB25 1140 aa8.9□□□□□ -0.98
TDP1-209ENST00000554180 GMCL1P1Q8NEA9 526 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms