RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 CSF1RP07333 972 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 HSP90AA1P07900 732 aaKnown RBP2.97□□□□□ -1.93
PRPF39-205ENST00000554081 ASNSP08243 561 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 PDE6AP16499 860 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 PLCD1P51178 756 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 TFAP4Q01664 338 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 KCTD2Q14681 263 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 CCDC85BQ15834 202 aaPredicted RBP2.97□□□□□ -1.93
PRPF39-205ENST00000554081 FOXD4L6Q3SYB3 417 aaPredicted RBP2.97□□□□□ -1.93
PRPF39-205ENST00000554081 APOBEC3HQ6NTF7 200 aaKnown RBP2.97□□□□□ -1.93
PRPF39-205ENST00000554081 CEP85Q6P2H3 762 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 FOXD4L3Q6VB84 417 aaPredicted RBP2.97□□□□□ -1.93
PRPF39-205ENST00000554081 LRP10Q7Z4F1 713 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 IFNL1Q8IU54 200 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 LCORLQ8N3X6 602 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 KCTD17Q8N5Z5 321 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 ERO1AQ96HE7 468 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 UBAC1Q9BSL1 405 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 PPP1R12CQ9BZL4 782 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 UBA5Q9GZZ9 404 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 CERS4Q9HA82 394 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 AS3MTQ9HBK9 375 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 ECHDC1Q9NTX5 307 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 HPS5Q9UPZ3 1129 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 DNAH12Q6ZR08 3092 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 MYPNQ86TC9 1320 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 CDHR2Q9BYE9 1310 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 BAZ2BQ9UIF8 2168 aaKnown RBP2.97□□□□□ -1.93
PRPF39-205ENST00000554081 CNTNAP1P78357 1384 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 TMEM232C9JQI7 657 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 ALDH1A1P00352 501 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 PGK1P00558 417 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 MYBP10242 640 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 FCGRTP55899 365 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 STK3Q13188 491 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 PABPC4Q13310 644 aaKnown RBP eCLIP2.97□□□□□ -1.93
PRPF39-205ENST00000554081 LRRFIP1Q32MZ4 808 aaKnown RBP2.97□□□□□ -1.93
PRPF39-205ENST00000554081 OTOP1Q7RTM1 612 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 ATG9AQ7Z3C6 839 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 ZNF280CQ8ND82 737 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 IL27Q8NEV9 243 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 FAM151AQ8WW52 585 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 SCLT1Q96NL6 688 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 PPP1R16BQ96T49 567 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 PARK7Q99497 189 aaKnown RBP2.97□□□□□ -1.93
PRPF39-205ENST00000554081 P2RX7Q99572 595 aaKnown RBP2.97□□□□□ -1.93
PRPF39-205ENST00000554081 ARHGEF10LQ9HCE6 1279 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 RAVER2Q9HCJ3 691 aaKnown RBP2.97□□□□□ -1.93
PRPF39-205ENST00000554081 STAP2Q9UGK3 403 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 SERPINA10Q9UK55 444 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 ZBTB21Q9ULJ3 1066 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 CNPY2Q9Y2B0 182 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 NR2E3Q9Y5X4 410 aa2.97□□□□□ -1.93
PRPF39-205ENST00000554081 SZT2Q5T011 3432 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 THSD7AQ9UPZ6 1657 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 RASSF10A6NK89 507 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 GPAA1O43292 621 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 CA12O43570 354 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 GLRX3O76003 335 aaKnown RBP2.96□□□□□ -1.94
PRPF39-205ENST00000554081 CFBP00751 764 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 PBX2P40425 430 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 PDE4BQ07343 736 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 FAM83BQ5T0W9 1011 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 TREML2Q5T2D2 321 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 GJC2Q5T442 439 aaPredicted RBP2.96□□□□□ -1.94
PRPF39-205ENST00000554081 FASTKD5Q7L8L6 764 aaKnown RBP2.96□□□□□ -1.94
PRPF39-205ENST00000554081 FBXO33Q7Z6M2 555 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 CMTR1Q8N1G2 835 aaKnown RBP2.96□□□□□ -1.94
PRPF39-205ENST00000554081 TMEM87AQ8NBN3 555 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 LENG1Q96BZ8 264 aaPredicted RBP2.96□□□□□ -1.94
PRPF39-205ENST00000554081 RPAP3Q9H6T3 665 aaPredicted RBP2.96□□□□□ -1.94
PRPF39-205ENST00000554081 PNMA3Q9UL41 463 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 GABRQQ9UN88 632 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 NRAPQ86VF7 1730 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 NMT2O60551 498 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 UPP2O95045 317 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 ZKSCAN1P17029 563 aaPredicted RBP2.96□□□□□ -1.94
PRPF39-205ENST00000554081 LIG1P18858 919 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 MX1P20591 662 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 MFAP1P55081 439 aaKnown RBP2.96□□□□□ -1.94
PRPF39-205ENST00000554081 RRP1P56182 461 aaKnown RBP2.96□□□□□ -1.94
PRPF39-205ENST00000554081 CCNA1P78396 465 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 AKAP17AQ02040 695 aaKnown RBP2.96□□□□□ -1.94
PRPF39-205ENST00000554081 GNL2Q13823 731 aaKnown RBP2.96□□□□□ -1.94
PRPF39-205ENST00000554081 TTF1Q15361 905 aaPredicted RBP2.96□□□□□ -1.94
PRPF39-205ENST00000554081 FOXD4L5Q5VV16 416 aaPredicted RBP2.96□□□□□ -1.94
PRPF39-205ENST00000554081 ZSCAN25Q6NSZ9 544 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 SYNE3Q6ZMZ3 975 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 RPAP2Q8IXW5 612 aaPredicted RBP2.96□□□□□ -1.94
PRPF39-205ENST00000554081 RNF169Q8NCN4 708 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 FOXD4L4Q8WXT5 416 aaPredicted RBP2.96□□□□□ -1.94
PRPF39-205ENST00000554081 TRIM47Q96LD4 638 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 FAM227BQ96M60 508 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 NUDT12Q9BQG2 462 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 ZBED2Q9BTP6 218 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 MYL10Q9BUA6 226 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 TRAIPQ9BWF2 469 aa2.96□□□□□ -1.94
PRPF39-205ENST00000554081 FTOQ9C0B1 505 aaKnown RBP eCLIP2.96□□□□□ -1.94
PRPF39-205ENST00000554081 PUS7LQ9H0K6 701 aaKnown RBP2.96□□□□□ -1.94
PRPF39-205ENST00000554081 SPC25Q9HBM1 224 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms