RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 TMEM265A0A087WTH1 108 aa9.45□□□□□ -0.9
ABCD4-220ENST00000553998 GLRX3O76003 335 aaKnown RBP9.45□□□□□ -0.9
ABCD4-220ENST00000553998 RTP1P59025 263 aa9.45□□□□□ -0.9
ABCD4-220ENST00000553998 CCNA1P78396 465 aa9.45□□□□□ -0.9
ABCD4-220ENST00000553998 GRB14Q14449 540 aa9.45□□□□□ -0.9
ABCD4-220ENST00000553998 C9orf50Q5SZB4 431 aa9.45□□□□□ -0.9
ABCD4-220ENST00000553998 USP17L2Q6R6M4 530 aa9.45□□□□□ -0.9
ABCD4-220ENST00000553998 TBC1D9Q6ZT07 1266 aa9.45□□□□□ -0.9
ABCD4-220ENST00000553998 TEX11Q8IYF3 940 aa9.45□□□□□ -0.9
ABCD4-220ENST00000553998 SH3RF3Q8TEJ3 882 aaPredicted RBP9.45□□□□□ -0.9
ABCD4-220ENST00000553998 PRKAG2Q9UGJ0 569 aa9.45□□□□□ -0.9
ABCD4-220ENST00000553998 USP17L15C9J2P7 530 aa9.44□□□□□ -0.9
ABCD4-220ENST00000553998 USP17L13C9JLJ4 530 aa9.44□□□□□ -0.9
ABCD4-220ENST00000553998 USP17L11C9JVI0 530 aa9.44□□□□□ -0.9
ABCD4-220ENST00000553998 USP17L18D6R9N7 530 aa9.44□□□□□ -0.9
ABCD4-220ENST00000553998 USP17L22D6RA61 530 aa9.44□□□□□ -0.9
ABCD4-220ENST00000553998 USP17L17D6RBQ6 530 aa9.44□□□□□ -0.9
ABCD4-220ENST00000553998 USP17L19D6RCP7 530 aa9.44□□□□□ -0.9
ABCD4-220ENST00000553998 USP17L20D6RJB6 530 aa9.44□□□□□ -0.9
ABCD4-220ENST00000553998 BAG3O95817 575 aa9.44□□□□□ -0.9
ABCD4-220ENST00000553998 CYBAP13498 195 aa9.44□□□□□ -0.9
ABCD4-220ENST00000553998 ATN1P54259 1190 aaPredicted RBP9.44□□□□□ -0.9
ABCD4-220ENST00000553998 ATP8B2P98198 1209 aa9.44□□□□□ -0.9
ABCD4-220ENST00000553998 USP17L24Q0WX57 530 aa9.44□□□□□ -0.9
ABCD4-220ENST00000553998 TFCP2Q12800 502 aa9.44□□□□□ -0.9
ABCD4-220ENST00000553998 SLC39A5Q6ZMH5 540 aa9.44□□□□□ -0.9
ABCD4-220ENST00000553998 CATSPERGQ6ZRH7 1159 aa9.44□□□□□ -0.9
ABCD4-220ENST00000553998 CCAR1Q8IX12 1150 aaKnown RBP9.44□□□□□ -0.9
ABCD4-220ENST00000553998 RPAP2Q8IXW5 612 aaPredicted RBP9.44□□□□□ -0.9
ABCD4-220ENST00000553998 ARRDC4Q8NCT1 418 aa9.44□□□□□ -0.9
ABCD4-220ENST00000553998 TRPV1Q8NER1 839 aa9.44□□□□□ -0.9
ABCD4-220ENST00000553998 ZBTB21Q9ULJ3 1066 aa9.44□□□□□ -0.9
ABCD4-220ENST00000553998 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.44□□□□□ -0.9
ABCD4-220ENST00000553998 SRGAP3O43295 1099 aa9.43□□□□□ -0.9
ABCD4-220ENST00000553998 PLCG2P16885 1265 aa9.43□□□□□ -0.9
ABCD4-220ENST00000553998 ATP2B2Q01814 1243 aa9.43□□□□□ -0.9
ABCD4-220ENST00000553998 POLA2Q14181 598 aa9.43□□□□□ -0.9
ABCD4-220ENST00000553998 SHROOM1Q2M3G4 852 aaPredicted RBP9.43□□□□□ -0.9
ABCD4-220ENST00000553998 OLFML2BQ68BL8 750 aa9.43□□□□□ -0.9
ABCD4-220ENST00000553998 TATDN1Q6P1N9 297 aa9.43□□□□□ -0.9
ABCD4-220ENST00000553998 CEP85Q6P2H3 762 aa9.43□□□□□ -0.9
ABCD4-220ENST00000553998 PI16Q6UXB8 463 aa9.43□□□□□ -0.9
ABCD4-220ENST00000553998 NPLOC4Q8TAT6 608 aa9.43□□□□□ -0.9
ABCD4-220ENST00000553998 MYLIPQ8WY64 445 aa9.43□□□□□ -0.9
ABCD4-220ENST00000553998 CRBNQ96SW2 442 aa9.43□□□□□ -0.9
ABCD4-220ENST00000553998 PAGR1Q9BTK6 254 aa9.43□□□□□ -0.9
ABCD4-220ENST00000553998 RAI14Q9P0K7 980 aa9.43□□□□□ -0.9
ABCD4-220ENST00000553998 FLT1P17948 1338 aa9.42□□□□□ -0.9
ABCD4-220ENST00000553998 TRIM43BA6NCK2 446 aa9.42□□□□□ -0.9
ABCD4-220ENST00000553998 STRNO43815 780 aa9.42□□□□□ -0.9
ABCD4-220ENST00000553998 HMMRO75330 724 aa9.42□□□□□ -0.9
ABCD4-220ENST00000553998 GDF11O95390 407 aa9.42□□□□□ -0.9
ABCD4-220ENST00000553998 UQCRFS1P1P0C7P4 283 aa9.42□□□□□ -0.9
ABCD4-220ENST00000553998 CYP2C19P33261 490 aa9.42□□□□□ -0.9
ABCD4-220ENST00000553998 MCAMP43121 646 aa9.42□□□□□ -0.9
ABCD4-220ENST00000553998 USP14P54578 494 aa9.42□□□□□ -0.9
ABCD4-220ENST00000553998 SSH3Q8TE77 659 aa9.42□□□□□ -0.9
ABCD4-220ENST00000553998 TGFBRAP1Q8WUH2 860 aa9.42□□□□□ -0.9
ABCD4-220ENST00000553998 BADQ92934 168 aa9.42□□□□□ -0.9
ABCD4-220ENST00000553998 TRIM43Q96BQ3 446 aaPredicted RBP9.42□□□□□ -0.9
ABCD4-220ENST00000553998 NEUROD6Q96NK8 337 aa9.42□□□□□ -0.9
ABCD4-220ENST00000553998 KIAA1683Q9H0B3 1180 aa9.42□□□□□ -0.9
ABCD4-220ENST00000553998 C1orf115Q9H7X2 142 aa9.42□□□□□ -0.9
ABCD4-220ENST00000553998 PDLIM7Q9NR12 457 aa9.42□□□□□ -0.9
ABCD4-220ENST00000553998 AATFQ9NY61 560 aaKnown RBP eCLIP9.42□□□□□ -0.9
ABCD4-220ENST00000553998 BTBD7Q9P203 1132 aa9.42□□□□□ -0.9
ABCD4-220ENST00000553998 LRP2BPQ9P2M1 347 aa9.42□□□□□ -0.9
ABCD4-220ENST00000553998 PALD1Q9ULE6 856 aa9.42□□□□□ -0.9
ABCD4-220ENST00000553998 ATP11BQ9Y2G3 1177 aa9.42□□□□□ -0.9
ABCD4-220ENST00000553998 PNMA6EA0A0J9YXQ4 647 aa9.41□□□□□ -0.9
ABCD4-220ENST00000553998 SEPT4O43236 478 aa9.41□□□□□ -0.9
ABCD4-220ENST00000553998 FOSL2P15408 326 aa9.41□□□□□ -0.9
ABCD4-220ENST00000553998 CNGA1P29973 690 aa9.41□□□□□ -0.9
ABCD4-220ENST00000553998 TJAP1Q5JTD0 557 aa9.41□□□□□ -0.9
ABCD4-220ENST00000553998 GJC2Q5T442 439 aaPredicted RBP9.41□□□□□ -0.9
ABCD4-220ENST00000553998 NAA16Q6N069 864 aaPredicted RBP9.41□□□□□ -0.9
ABCD4-220ENST00000553998 SH3RF1Q7Z6J0 888 aa9.41□□□□□ -0.9
ABCD4-220ENST00000553998 ADGRA1Q86SQ6 560 aa9.41□□□□□ -0.9
ABCD4-220ENST00000553998 MAPKAPK5Q8IW41 473 aa9.41□□□□□ -0.9
ABCD4-220ENST00000553998 CRACR2BQ8N4Y2 399 aaPredicted RBP9.41□□□□□ -0.9
ABCD4-220ENST00000553998 ZNF512BQ96KM6 892 aaPredicted RBP9.41□□□□□ -0.9
ABCD4-220ENST00000553998 NOL10Q9BSC4 688 aaKnown RBP9.41□□□□□ -0.9
ABCD4-220ENST00000553998 EHD4Q9H223 541 aa9.41□□□□□ -0.9
ABCD4-220ENST00000553998 SPDYE16A6NNV3 312 aaPredicted RBP9.4□□□□□ -0.9
ABCD4-220ENST00000553998 KBTBD13C9JR72 458 aa9.4□□□□□ -0.9
ABCD4-220ENST00000553998 TNFRSF10AO00220 468 aa9.4□□□□□ -0.9
ABCD4-220ENST00000553998 GH2P01242 217 aa9.4□□□□□ -0.9
ABCD4-220ENST00000553998 HLA-DOAP06340 250 aa9.4□□□□□ -0.9
ABCD4-220ENST00000553998 VCAM1P19320 739 aa9.4□□□□□ -0.9
ABCD4-220ENST00000553998 COL9A1P20849 921 aa9.4□□□□□ -0.9
ABCD4-220ENST00000553998 ITGB8P26012 769 aa9.4□□□□□ -0.9
ABCD4-220ENST00000553998 LRRC41Q15345 812 aa9.4□□□□□ -0.9
ABCD4-220ENST00000553998 TRIM60Q495X7 471 aa9.4□□□□□ -0.9
ABCD4-220ENST00000553998 HSP90AB4PQ58FF6 505 aa9.4□□□□□ -0.9
ABCD4-220ENST00000553998 GORABQ5T7V8 394 aa9.4□□□□□ -0.9
ABCD4-220ENST00000553998 SHCBP1Q8NEM2 672 aa9.4□□□□□ -0.9
ABCD4-220ENST00000553998 CWC22Q9HCG8 908 aaKnown RBP9.4□□□□□ -0.9
ABCD4-220ENST00000553998 GPR108Q9NPR9 543 aa9.4□□□□□ -0.9
ABCD4-220ENST00000553998 NOP58Q9Y2X3 529 aaKnown RBP9.4□□□□□ -0.9
ABCD4-220ENST00000553998 TACC3Q9Y6A5 838 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms