RNA–Protein interactions for RNA: ENST00000553993.1

TRAV32-201, Transcript of T cell receptor alpha variable 32 (pseudogene), humanhuman

BASIC

Gene TRAV32, Length 340 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV32-201ENST00000553993 SNX11Q9Y5W9 270 aa4.5□□□□□ -1.69
TRAV32-201ENST00000553993 OAS3Q9Y6K5 1087 aaKnown RBP4.5□□□□□ -1.69
TRAV32-201ENST00000553993 PRR33A8MZF0 331 aa4.49□□□□□ -1.69
TRAV32-201ENST00000553993 CHURC1-FNTBB4DL54 471 aa4.49□□□□□ -1.69
TRAV32-201ENST00000553993 ZNF865P0CJ78 1059 aaPredicted RBP4.49□□□□□ -1.69
TRAV32-201ENST00000553993 KIR3DL1P43629 444 aa4.49□□□□□ -1.69
TRAV32-201ENST00000553993 ZNF165P49910 485 aa4.49□□□□□ -1.69
TRAV32-201ENST00000553993 BNIP3Q12983 259 aa4.49□□□□□ -1.69
TRAV32-201ENST00000553993 PLCL1Q15111 1095 aa4.49□□□□□ -1.69
TRAV32-201ENST00000553993 NKPD1Q17RQ9 610 aa4.49□□□□□ -1.69
TRAV32-201ENST00000553993 CDKAL1Q5VV42 579 aa4.49□□□□□ -1.69
TRAV32-201ENST00000553993 ZNF574Q6ZN55 896 aaPredicted RBP4.49□□□□□ -1.69
TRAV32-201ENST00000553993 C22orf34Q6ZV56 151 aa4.49□□□□□ -1.69
TRAV32-201ENST00000553993 ZNF654Q8IZM8 581 aa4.49□□□□□ -1.69
TRAV32-201ENST00000553993 DNAJB8Q8NHS0 232 aa4.49□□□□□ -1.69
TRAV32-201ENST00000553993 ASB11Q8WXH4 323 aa4.49□□□□□ -1.69
TRAV32-201ENST00000553993 EAF1Q96JC9 268 aaPredicted RBP4.49□□□□□ -1.69
TRAV32-201ENST00000553993 CCDC74BQ96LY2 380 aa4.49□□□□□ -1.69
TRAV32-201ENST00000553993 PAK6Q9NQU5 681 aaPredicted RBP4.49□□□□□ -1.69
TRAV32-201ENST00000553993 DDX41Q9UJV9 622 aaKnown RBP4.49□□□□□ -1.69
TRAV32-201ENST00000553993 CEP131Q9UPN4 1083 aa4.49□□□□□ -1.69
TRAV32-201ENST00000553993 RAG1P15918 1043 aa4.48□□□□□ -1.69
TRAV32-201ENST00000553993 GBP1P32455 592 aa4.48□□□□□ -1.69
TRAV32-201ENST00000553993 IRAK1P51617 712 aa4.48□□□□□ -1.69
TRAV32-201ENST00000553993 HDLBPQ00341 1268 aaKnown RBP4.48□□□□□ -1.69
TRAV32-201ENST00000553993 ARSHQ5FYA8 562 aa4.48□□□□□ -1.69
TRAV32-201ENST00000553993 ANGEL2Q5VTE6 544 aaKnown RBP4.48□□□□□ -1.69
TRAV32-201ENST00000553993 C9orf131Q5VYM1 1079 aa4.48□□□□□ -1.69
TRAV32-201ENST00000553993 SPRED2Q7Z698 418 aa4.48□□□□□ -1.69
TRAV32-201ENST00000553993 NT5DC4Q86YG4 428 aa4.48□□□□□ -1.69
TRAV32-201ENST00000553993 SLITRK4Q8IW52 837 aa4.48□□□□□ -1.69
TRAV32-201ENST00000553993 ABI1Q8IZP0 508 aa4.48□□□□□ -1.69
TRAV32-201ENST00000553993 REXO1Q8N1G1 1221 aaKnown RBP4.48□□□□□ -1.69
TRAV32-201ENST00000553993 GOLGA2P5Q9HBQ8 144 aa4.48□□□□□ -1.69
TRAV32-201ENST00000553993 GMIPQ9P107 970 aa4.48□□□□□ -1.69
TRAV32-201ENST00000553993 CAPN6Q9Y6Q1 641 aa4.48□□□□□ -1.69
TRAV32-201ENST00000553993 PITPNM2Q9BZ72 1349 aa4.47□□□□□ -1.69
TRAV32-201ENST00000553993 CNTNAP4Q9C0A0 1308 aa4.47□□□□□ -1.69
TRAV32-201ENST00000553993 SLC22A31A6NKX4 558 aa4.47□□□□□ -1.69
TRAV32-201ENST00000553993 H3BS24 57 aa4.47□□□□□ -1.69
TRAV32-201ENST00000553993 DNAJA2O60884 412 aa4.47□□□□□ -1.69
TRAV32-201ENST00000553993 ATE1O95260 518 aa4.47□□□□□ -1.69
TRAV32-201ENST00000553993 CD8BP10966 210 aa4.47□□□□□ -1.69
TRAV32-201ENST00000553993 CD96P40200 585 aa4.47□□□□□ -1.69
TRAV32-201ENST00000553993 RACK1P63244 317 aaKnown RBP4.47□□□□□ -1.69
TRAV32-201ENST00000553993 CLCQ05315 142 aa4.47□□□□□ -1.69
TRAV32-201ENST00000553993 IKZF1Q13422 519 aa4.47□□□□□ -1.69
TRAV32-201ENST00000553993 LRRFIP1Q32MZ4 808 aaKnown RBP4.47□□□□□ -1.69
TRAV32-201ENST00000553993 OVOS1Q6IE37 1185 aa4.47□□□□□ -1.69
TRAV32-201ENST00000553993 NFXL1Q6ZNB6 911 aa4.47□□□□□ -1.69
TRAV32-201ENST00000553993 METTL16Q86W50 562 aaKnown RBP4.47□□□□□ -1.69
TRAV32-201ENST00000553993 BAHD1Q8TBE0 780 aaPredicted RBP4.47□□□□□ -1.69
TRAV32-201ENST00000553993 PPP1R13LQ8WUF5 828 aa4.47□□□□□ -1.69
TRAV32-201ENST00000553993 HSPA12BQ96MM6 686 aa4.47□□□□□ -1.69
TRAV32-201ENST00000553993 FERD3LQ96RJ6 166 aa4.47□□□□□ -1.69
TRAV32-201ENST00000553993 KIF2CQ99661 725 aa4.47□□□□□ -1.69
TRAV32-201ENST00000553993 EHMT1Q9H9B1 1298 aa4.47□□□□□ -1.69
TRAV32-201ENST00000553993 IMPDH2P12268 514 aa4.46□□□□□ -1.7
TRAV32-201ENST00000553993 RBM25P49756 843 aaKnown RBP4.46□□□□□ -1.7
TRAV32-201ENST00000553993 TNK2Q07912 1038 aa4.46□□□□□ -1.7
TRAV32-201ENST00000553993 PAK2Q13177 524 aa4.46□□□□□ -1.7
TRAV32-201ENST00000553993 NLRC3Q7RTR2 1065 aa4.46□□□□□ -1.7
TRAV32-201ENST00000553993 PIWIL2Q8TC59 973 aaKnown RBP4.46□□□□□ -1.7
TRAV32-201ENST00000553993 RNF141Q8WVD5 230 aa4.46□□□□□ -1.7
TRAV32-201ENST00000553993 KREMEN1Q96MU8 473 aa4.46□□□□□ -1.7
TRAV32-201ENST00000553993 ASPNQ9BXN1 380 aa4.46□□□□□ -1.7
TRAV32-201ENST00000553993 KCNH3Q9ULD8 1083 aa4.46□□□□□ -1.7
TRAV32-201ENST00000553993 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.46□□□□□ -1.7
TRAV32-201ENST00000553993 RGS13O14921 159 aa4.45□□□□□ -1.7
TRAV32-201ENST00000553993 FUT4P22083 530 aa4.45□□□□□ -1.7
TRAV32-201ENST00000553993 RNF4P78317 190 aa4.45□□□□□ -1.7
TRAV32-201ENST00000553993 FBXW10Q5XX13 1052 aa4.45□□□□□ -1.7
TRAV32-201ENST00000553993 THAP5Q7Z6K1 395 aa4.45□□□□□ -1.7
TRAV32-201ENST00000553993 WFDC3Q8IUB2 231 aa4.45□□□□□ -1.7
TRAV32-201ENST00000553993 PI4K2BQ8TCG2 481 aa4.45□□□□□ -1.7
TRAV32-201ENST00000553993 TMEM40Q8WWA1 233 aa4.45□□□□□ -1.7
TRAV32-201ENST00000553993 ZNF428Q96B54 188 aa4.45□□□□□ -1.7
TRAV32-201ENST00000553993 SPATA32Q96LK8 384 aa4.45□□□□□ -1.7
TRAV32-201ENST00000553993 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.45□□□□□ -1.7
TRAV32-201ENST00000553993 TRIT1Q9H3H1 467 aaKnown RBP4.45□□□□□ -1.7
TRAV32-201ENST00000553993 CCSER2Q9H7U1 834 aa4.45□□□□□ -1.7
TRAV32-201ENST00000553993 CNNM2Q9H8M5 875 aa4.45□□□□□ -1.7
TRAV32-201ENST00000553993 ATP13A1Q9HD20 1204 aa4.45□□□□□ -1.7
TRAV32-201ENST00000553993 SEMA3GQ9NS98 782 aa4.45□□□□□ -1.7
TRAV32-201ENST00000553993 ZSWIM5Q9P217 1185 aa4.45□□□□□ -1.7
TRAV32-201ENST00000553993 ST14Q9Y5Y6 855 aa4.45□□□□□ -1.7
TRAV32-201ENST00000553993 COL17A1Q9UMD9 1497 aaPredicted RBP4.44□□□□□ -1.7
TRAV32-201ENST00000553993 PAX4O43316 350 aa4.44□□□□□ -1.7
TRAV32-201ENST00000553993 TCF3P15923 654 aa4.44□□□□□ -1.7
TRAV32-201ENST00000553993 POLR2BP30876 1174 aaKnown RBP4.44□□□□□ -1.7
TRAV32-201ENST00000553993 TXKP42681 527 aa4.44□□□□□ -1.7
TRAV32-201ENST00000553993 ZP2Q05996 745 aa4.44□□□□□ -1.7
TRAV32-201ENST00000553993 RAD51AP2Q09MP3 1159 aa4.44□□□□□ -1.7
TRAV32-201ENST00000553993 COL9A2Q14055 689 aaPredicted RBP4.44□□□□□ -1.7
TRAV32-201ENST00000553993 ZNF792Q3KQV3 632 aa4.44□□□□□ -1.7
TRAV32-201ENST00000553993 CDCP2Q5VXM1 449 aa4.44□□□□□ -1.7
TRAV32-201ENST00000553993 KRTAP19-1Q8IUB9 90 aa4.44□□□□□ -1.7
TRAV32-201ENST00000553993 DTWD2Q8NBA8 298 aa4.44□□□□□ -1.7
TRAV32-201ENST00000553993 UBE2FQ969M7 185 aa4.44□□□□□ -1.7
TRAV32-201ENST00000553993 GPRASP2Q96D09 838 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms