RNA–Protein interactions for RNA: ENST00000553937.1

SDR39U1-207, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 217 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-207ENST00000553937 GABPAQ06546 454 aa10.95□□□□□ -0.66
SDR39U1-207ENST00000553937 U2AF1L4Q8WU68 220 aaKnown RBP10.95□□□□□ -0.66
SDR39U1-207ENST00000553937 C12orf42Q96LP6 360 aa10.95□□□□□ -0.66
SDR39U1-207ENST00000553937 HAUS7Q99871 368 aa10.95□□□□□ -0.66
SDR39U1-207ENST00000553937 TXNRD2Q9NNW7 524 aa10.95□□□□□ -0.66
SDR39U1-207ENST00000553937 DCP1AQ9NPI6 582 aaPredicted RBP10.95□□□□□ -0.66
SDR39U1-207ENST00000553937 PLXNA1Q9UIW2 1896 aa10.94□□□□□ -0.66
SDR39U1-207ENST00000553937 ZNF236Q9UL36 1845 aa10.94□□□□□ -0.66
SDR39U1-207ENST00000553937 PRKAB2O43741 272 aa10.94□□□□□ -0.66
SDR39U1-207ENST00000553937 MBD4O95243 580 aa10.94□□□□□ -0.66
SDR39U1-207ENST00000553937 IGHDP01880 384 aa10.94□□□□□ -0.66
SDR39U1-207ENST00000553937 CYP2D6P10635 497 aa10.94□□□□□ -0.66
SDR39U1-207ENST00000553937 POTEEQ6S8J3 1075 aa10.94□□□□□ -0.66
SDR39U1-207ENST00000553937 GPRC5AQ8NFJ5 357 aa10.94□□□□□ -0.66
SDR39U1-207ENST00000553937 ACER1Q8TDN7 264 aa10.94□□□□□ -0.66
SDR39U1-207ENST00000553937 GCC1Q96CN9 775 aa10.94□□□□□ -0.66
SDR39U1-207ENST00000553937 PAGR1Q9BTK6 254 aa10.94□□□□□ -0.66
SDR39U1-207ENST00000553937 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.94□□□□□ -0.66
SDR39U1-207ENST00000553937 CABP5Q9NP86 173 aa10.94□□□□□ -0.66
SDR39U1-207ENST00000553937 RBPJLQ9UBG7 517 aa10.94□□□□□ -0.66
SDR39U1-207ENST00000553937 GJD2Q9UKL4 321 aa10.94□□□□□ -0.66
SDR39U1-207ENST00000553937 MPHOSPH10O00566 681 aaKnown RBP10.93□□□□□ -0.66
SDR39U1-207ENST00000553937 SGPL1O95470 568 aa10.93□□□□□ -0.66
SDR39U1-207ENST00000553937 HMGCRP04035 888 aa10.93□□□□□ -0.66
SDR39U1-207ENST00000553937 VCAM1P19320 739 aa10.93□□□□□ -0.66
SDR39U1-207ENST00000553937 GUCY1A2P33402 732 aa10.93□□□□□ -0.66
SDR39U1-207ENST00000553937 USP14P54578 494 aa10.93□□□□□ -0.66
SDR39U1-207ENST00000553937 ERVK-9P63128 1117 aa10.93□□□□□ -0.66
SDR39U1-207ENST00000553937 ERVK-24P63145 666 aa10.93□□□□□ -0.66
SDR39U1-207ENST00000553937 SEPT2Q15019 361 aa10.93□□□□□ -0.66
SDR39U1-207ENST00000553937 Q3C1V9 767 aa10.93□□□□□ -0.66
SDR39U1-207ENST00000553937 B4GALNT3Q6L9W6 998 aa10.93□□□□□ -0.66
SDR39U1-207ENST00000553937 UBE2Q1Q7Z7E8 422 aa10.93□□□□□ -0.66
SDR39U1-207ENST00000553937 SLC44A5Q8NCS7 719 aa10.93□□□□□ -0.66
SDR39U1-207ENST00000553937 DEFB118Q96PH6 123 aa10.93□□□□□ -0.66
SDR39U1-207ENST00000553937 KIAA1683Q9H0B3 1180 aa10.93□□□□□ -0.66
SDR39U1-207ENST00000553937 PORCNQ9H237 461 aa10.93□□□□□ -0.66
SDR39U1-207ENST00000553937 DCTPP1Q9H773 170 aa10.93□□□□□ -0.66
SDR39U1-207ENST00000553937 PAK6Q9NQU5 681 aaPredicted RBP10.93□□□□□ -0.66
SDR39U1-207ENST00000553937 USP17L15C9J2P7 530 aa10.92□□□□□ -0.66
SDR39U1-207ENST00000553937 USP17L13C9JLJ4 530 aa10.92□□□□□ -0.66
SDR39U1-207ENST00000553937 USP17L11C9JVI0 530 aa10.92□□□□□ -0.66
SDR39U1-207ENST00000553937 USP17L18D6R9N7 530 aa10.92□□□□□ -0.66
SDR39U1-207ENST00000553937 USP17L22D6RA61 530 aa10.92□□□□□ -0.66
SDR39U1-207ENST00000553937 USP17L17D6RBQ6 530 aa10.92□□□□□ -0.66
SDR39U1-207ENST00000553937 USP17L19D6RCP7 530 aa10.92□□□□□ -0.66
SDR39U1-207ENST00000553937 USP17L20D6RJB6 530 aa10.92□□□□□ -0.66
SDR39U1-207ENST00000553937 FARP2O94887 1054 aaPredicted RBP10.92□□□□□ -0.66
SDR39U1-207ENST00000553937 CENPBP07199 599 aaPredicted RBP10.92□□□□□ -0.66
SDR39U1-207ENST00000553937 CYP2B6P20813 491 aa10.92□□□□□ -0.66
SDR39U1-207ENST00000553937 USP17L24Q0WX57 530 aa10.92□□□□□ -0.66
SDR39U1-207ENST00000553937 TRIM32Q13049 653 aa10.92□□□□□ -0.66
SDR39U1-207ENST00000553937 UBE3CQ15386 1083 aa10.92□□□□□ -0.66
SDR39U1-207ENST00000553937 TSHZ3Q63HK5 1081 aa10.92□□□□□ -0.66
SDR39U1-207ENST00000553937 OTUD7AQ8TE49 926 aaPredicted RBP10.92□□□□□ -0.66
SDR39U1-207ENST00000553937 GTF3C2Q8WUA4 911 aaPredicted RBP10.92□□□□□ -0.66
SDR39U1-207ENST00000553937 TRIB2Q92519 343 aa10.92□□□□□ -0.66
SDR39U1-207ENST00000553937 DYNLL2Q96FJ2 89 aa10.92□□□□□ -0.66
SDR39U1-207ENST00000553937 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.92□□□□□ -0.66
SDR39U1-207ENST00000553937 ECHDC1Q9NTX5 307 aa10.92□□□□□ -0.66
SDR39U1-207ENST00000553937 TRIOBPQ9H2D6 2365 aa10.91□□□□□ -0.66
SDR39U1-207ENST00000553937 CYP2D7A0A087X1C5 515 aa10.91□□□□□ -0.66
SDR39U1-207ENST00000553937 A0A1W2PRG0 241 aa10.91□□□□□ -0.66
SDR39U1-207ENST00000553937 H0YGN5 161 aa10.91□□□□□ -0.66
SDR39U1-207ENST00000553937 SMIM22K7EJ46 135 aa10.91□□□□□ -0.66
SDR39U1-207ENST00000553937 CNMDO75829 334 aa10.91□□□□□ -0.66
SDR39U1-207ENST00000553937 MAPK4P31152 587 aa10.91□□□□□ -0.66
SDR39U1-207ENST00000553937 HABP4Q5JVS0 413 aaKnown RBP10.91□□□□□ -0.66
SDR39U1-207ENST00000553937 ANKRD45Q5TZF3 282 aa10.91□□□□□ -0.66
SDR39U1-207ENST00000553937 ZSCAN25Q6NSZ9 544 aa10.91□□□□□ -0.66
SDR39U1-207ENST00000553937 CATSPERGQ6ZRH7 1159 aa10.91□□□□□ -0.66
SDR39U1-207ENST00000553937 GPR142Q7Z601 462 aa10.91□□□□□ -0.66
SDR39U1-207ENST00000553937 CLEC10AQ8IUN9 316 aa10.91□□□□□ -0.66
SDR39U1-207ENST00000553937 CCAR1Q8IX12 1150 aaKnown RBP10.91□□□□□ -0.66
SDR39U1-207ENST00000553937 SOCS4Q8WXH5 440 aa10.91□□□□□ -0.66
SDR39U1-207ENST00000553937 NUDT12Q9BQG2 462 aa10.91□□□□□ -0.66
SDR39U1-207ENST00000553937 HTATIP2Q9BUP3 242 aa10.91□□□□□ -0.66
SDR39U1-207ENST00000553937 PUS7LQ9H0K6 701 aaKnown RBP10.91□□□□□ -0.66
SDR39U1-207ENST00000553937 RPAP3Q9H6T3 665 aaPredicted RBP10.91□□□□□ -0.66
SDR39U1-207ENST00000553937 ATP8A2Q9NTI2 1148 aa10.91□□□□□ -0.66
SDR39U1-207ENST00000553937 SWAP70Q9UH65 585 aa10.91□□□□□ -0.66
SDR39U1-207ENST00000553937 RABGAP1Q9Y3P9 1069 aa10.91□□□□□ -0.66
SDR39U1-207ENST00000553937 RPTORQ8N122 1335 aa10.9□□□□□ -0.66
SDR39U1-207ENST00000553937 SPDYE16A6NNV3 312 aaPredicted RBP10.9□□□□□ -0.66
SDR39U1-207ENST00000553937 USP17L12C9JPN9 530 aa10.9□□□□□ -0.66
SDR39U1-207ENST00000553937 USP17L21D6R901 530 aa10.9□□□□□ -0.66
SDR39U1-207ENST00000553937 TFRCP02786 760 aaKnown RBP10.9□□□□□ -0.66
SDR39U1-207ENST00000553937 AKR1B1P15121 316 aa10.9□□□□□ -0.66
SDR39U1-207ENST00000553937 HDAC1Q13547 482 aaPredicted RBP10.9□□□□□ -0.66
SDR39U1-207ENST00000553937 C12orf60Q5U649 245 aa10.9□□□□□ -0.66
SDR39U1-207ENST00000553937 LBX2Q6XYB7 198 aa10.9□□□□□ -0.66
SDR39U1-207ENST00000553937 TMEM179Q6ZVK1 233 aa10.9□□□□□ -0.66
SDR39U1-207ENST00000553937 PLEKHH3Q7Z736 793 aa10.9□□□□□ -0.66
SDR39U1-207ENST00000553937 DPF3Q92784 378 aa10.9□□□□□ -0.66
SDR39U1-207ENST00000553937 CRISPLD2Q9H0B8 497 aa10.9□□□□□ -0.66
SDR39U1-207ENST00000553937 HMX1Q9NP08 348 aaPredicted RBP10.9□□□□□ -0.66
SDR39U1-207ENST00000553937 SLC4A4Q9Y6R1 1079 aa10.9□□□□□ -0.66
SDR39U1-207ENST00000553937 XRCC5P13010 732 aaKnown RBP10.89□□□□□ -0.67
SDR39U1-207ENST00000553937 CDK8P49336 464 aa10.89□□□□□ -0.67
SDR39U1-207ENST00000553937 CCL14Q16627 93 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms