RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 DYNLL1P63167 89 aaKnown RBP21.64■■□□□ 1.05
SYNE2-211ENST00000553801 PIH1D3Q9NQM4 214 aaKnown RBP21.64■■□□□ 1.05
SYNE2-211ENST00000553801 TNNQ9UQP3 1299 aa21.64■■□□□ 1.05
SYNE2-211ENST00000553801 BCAR3O75815 825 aa21.63■■□□□ 1.05
SYNE2-211ENST00000553801 LRRC26Q2I0M4 334 aa21.63■■□□□ 1.05
SYNE2-211ENST00000553801 TATDN1Q6P1N9 297 aa21.63■■□□□ 1.05
SYNE2-211ENST00000553801 Q7L0L9 218 aa21.63■■□□□ 1.05
SYNE2-211ENST00000553801 SERPINB13Q9UIV8 391 aa21.63■■□□□ 1.05
SYNE2-211ENST00000553801 MYO5AQ9Y4I1 1855 aaKnown RBP21.62■■□□□ 1.05
SYNE2-211ENST00000553801 SLC15A5A6NIM6 579 aa21.62■■□□□ 1.05
SYNE2-211ENST00000553801 IDH1O75874 414 aaKnown RBP21.62■■□□□ 1.05
SYNE2-211ENST00000553801 ZYXQ15942 572 aaKnown RBP21.62■■□□□ 1.05
SYNE2-211ENST00000553801 WDR78Q5VTH9 848 aa21.62■■□□□ 1.05
SYNE2-211ENST00000553801 TMED8Q6PL24 325 aaPredicted RBP21.62■■□□□ 1.05
SYNE2-211ENST00000553801 CATSPERGQ6ZRH7 1159 aa21.62■■□□□ 1.05
SYNE2-211ENST00000553801 TTC6Q86TZ1 520 aa21.62■■□□□ 1.05
SYNE2-211ENST00000553801 TMEM57Q8N5G2 664 aa21.62■■□□□ 1.05
SYNE2-211ENST00000553801 EHD4Q9H223 541 aa21.62■■□□□ 1.05
SYNE2-211ENST00000553801 CABP5Q9NP86 173 aa21.62■■□□□ 1.05
SYNE2-211ENST00000553801 MTMR10Q9NXD2 777 aa21.62■■□□□ 1.05
SYNE2-211ENST00000553801 IVNS1ABPQ9Y6Y0 642 aa21.62■■□□□ 1.05
SYNE2-211ENST00000553801 MYH1P12882 1939 aa21.62■■□□□ 1.05
SYNE2-211ENST00000553801 MSCO60682 206 aa21.61■■□□□ 1.05
SYNE2-211ENST00000553801 RAB3GAP1Q15042 981 aa21.61■■□□□ 1.05
SYNE2-211ENST00000553801 CERKLQ49MI3 558 aaPredicted RBP21.61■■□□□ 1.05
SYNE2-211ENST00000553801 ZKSCAN2Q63HK3 967 aa21.61■■□□□ 1.05
SYNE2-211ENST00000553801 POTEEQ6S8J3 1075 aa21.61■■□□□ 1.05
SYNE2-211ENST00000553801 KIAA1683Q9H0B3 1180 aa21.61■■□□□ 1.05
SYNE2-211ENST00000553801 NOP58Q9Y2X3 529 aaKnown RBP21.61■■□□□ 1.05
SYNE2-211ENST00000553801 COL6A3P12111 3177 aa21.6■■□□□ 1.05
SYNE2-211ENST00000553801 CNMDO75829 334 aa21.6■■□□□ 1.05
SYNE2-211ENST00000553801 PTPREP23469 700 aa21.6■■□□□ 1.05
SYNE2-211ENST00000553801 ATP2B2Q01814 1243 aa21.6■■□□□ 1.05
SYNE2-211ENST00000553801 ABCB5Q2M3G0 1257 aa21.6■■□□□ 1.05
SYNE2-211ENST00000553801 LBX2Q6XYB7 198 aa21.6■■□□□ 1.05
SYNE2-211ENST00000553801 MIGA1Q8NAN2 632 aa21.6■■□□□ 1.05
SYNE2-211ENST00000553801 LBHD1Q9BQE6 289 aaPredicted RBP21.6■■□□□ 1.05
SYNE2-211ENST00000553801 DBNLQ9UJU6 430 aaKnown RBP21.6■■□□□ 1.05
SYNE2-211ENST00000553801 MDM2Q00987 491 aaPredicted RBP21.59■■□□□ 1.05
SYNE2-211ENST00000553801 MAP3K12Q12852 859 aa21.59■■□□□ 1.05
SYNE2-211ENST00000553801 MAGEB6Q8N7X4 407 aa21.59■■□□□ 1.05
SYNE2-211ENST00000553801 SENP6Q9GZR1 1112 aaPredicted RBP21.59■■□□□ 1.05
SYNE2-211ENST00000553801 CCDC8Q9H0W5 538 aaPredicted RBP21.59■■□□□ 1.05
SYNE2-211ENST00000553801 DDX20Q9UHI6 824 aaKnown RBP21.59■■□□□ 1.05
SYNE2-211ENST00000553801 CCER2I3L3R5 266 aa21.58■■□□□ 1.05
SYNE2-211ENST00000553801 HOXC6P09630 235 aa21.58■■□□□ 1.05
SYNE2-211ENST00000553801 VCAM1P19320 739 aa21.58■■□□□ 1.05
SYNE2-211ENST00000553801 CNGA1P29973 690 aa21.58■■□□□ 1.05
SYNE2-211ENST00000553801 NDUFB9Q9Y6M9 179 aa21.58■■□□□ 1.05
SYNE2-211ENST00000553801 CUL9Q8IWT3 2517 aa21.58■■□□□ 1.04
SYNE2-211ENST00000553801 GRB14Q14449 540 aa21.57■■□□□ 1.04
SYNE2-211ENST00000553801 LPAR1Q92633 364 aa21.57■■□□□ 1.04
SYNE2-211ENST00000553801 FLRT1Q9NZU1 646 aa21.57■■□□□ 1.04
SYNE2-211ENST00000553801 PRKAG2Q9UGJ0 569 aa21.57■■□□□ 1.04
SYNE2-211ENST00000553801 ACER1Q8TDN7 264 aa21.56■■□□□ 1.04
SYNE2-211ENST00000553801 EAF2Q96CJ1 260 aaPredicted RBP21.56■■□□□ 1.04
SYNE2-211ENST00000553801 RPAP3Q9H6T3 665 aaPredicted RBP21.56■■□□□ 1.04
SYNE2-211ENST00000553801 TLR7Q9NYK1 1049 aaKnown RBP21.56■■□□□ 1.04
SYNE2-211ENST00000553801 BTBD7Q9P203 1132 aa21.56■■□□□ 1.04
SYNE2-211ENST00000553801 DNM1LO00429 736 aa21.55■■□□□ 1.04
SYNE2-211ENST00000553801 FAM109BQ6ICB4 259 aaPredicted RBP21.55■■□□□ 1.04
SYNE2-211ENST00000553801 C1orf115Q9H7X2 142 aa21.55■■□□□ 1.04
SYNE2-211ENST00000553801 SPDYE16A6NNV3 312 aaPredicted RBP21.54■■□□□ 1.04
SYNE2-211ENST00000553801 POLR3DP05423 398 aaPredicted RBP21.54■■□□□ 1.04
SYNE2-211ENST00000553801 DPP9Q86TI2 863 aa21.54■■□□□ 1.04
SYNE2-211ENST00000553801 FTSJ3Q8IY81 847 aaKnown RBP21.54■■□□□ 1.04
SYNE2-211ENST00000553801 NPLOC4Q8TAT6 608 aa21.54■■□□□ 1.04
SYNE2-211ENST00000553801 HOXC10Q9NYD6 342 aa21.54■■□□□ 1.04
SYNE2-211ENST00000553801 FRMPD3Q5JV73 1810 aa21.54■■□□□ 1.04
SYNE2-211ENST00000553801 A0A0C4DFX4 3053 aa21.54■■□□□ 1.04
SYNE2-211ENST00000553801 STRNO43815 780 aa21.53■■□□□ 1.04
SYNE2-211ENST00000553801 CYP2C19P33261 490 aa21.53■■□□□ 1.04
SYNE2-211ENST00000553801 SHMT1P34896 483 aa21.53■■□□□ 1.04
SYNE2-211ENST00000553801 ATN1P54259 1190 aaPredicted RBP21.53■■□□□ 1.04
SYNE2-211ENST00000553801 COG2Q14746 738 aa21.53■■□□□ 1.04
SYNE2-211ENST00000553801 ARRDC4Q8NCT1 418 aa21.53■■□□□ 1.04
SYNE2-211ENST00000553801 POTEB2H3BUK9 544 aa21.52■■□□□ 1.04
SYNE2-211ENST00000553801 PLCD1P51178 756 aa21.52■■□□□ 1.04
SYNE2-211ENST00000553801 OLFML2BQ68BL8 750 aa21.52■■□□□ 1.04
SYNE2-211ENST00000553801 ERC1Q8IUD2 1116 aa21.52■■□□□ 1.04
SYNE2-211ENST00000553801 ITPRIPQ8IWB1 547 aa21.52■■□□□ 1.04
SYNE2-211ENST00000553801 ANTXR1Q9H6X2 564 aa21.52■■□□□ 1.04
SYNE2-211ENST00000553801 SLC5A4Q9NY91 659 aa21.52■■□□□ 1.04
SYNE2-211ENST00000553801 MAGEB6P1A0A0J9YX57 407 aa21.51■■□□□ 1.03
SYNE2-211ENST00000553801 CYBAP13498 195 aa21.51■■□□□ 1.03
SYNE2-211ENST00000553801 RTP1P59025 263 aa21.51■■□□□ 1.03
SYNE2-211ENST00000553801 SEPT2Q15019 361 aa21.51■■□□□ 1.03
SYNE2-211ENST00000553801 TTF1Q15361 905 aaPredicted RBP21.51■■□□□ 1.03
SYNE2-211ENST00000553801 RIOK1Q9BRS2 568 aaKnown RBP21.51■■□□□ 1.03
SYNE2-211ENST00000553801 CRNKL1Q9BZJ0 848 aaKnown RBP21.51■■□□□ 1.03
SYNE2-211ENST00000553801 MPHOSPH10O00566 681 aaKnown RBP21.5■■□□□ 1.03
SYNE2-211ENST00000553801 GUCY1A2P33402 732 aa21.5■■□□□ 1.03
SYNE2-211ENST00000553801 GABPAQ06546 454 aa21.5■■□□□ 1.03
SYNE2-211ENST00000553801 AACSQ86V21 672 aa21.5■■□□□ 1.03
SYNE2-211ENST00000553801 MB21D1Q8N884 522 aa21.5■■□□□ 1.03
SYNE2-211ENST00000553801 SHCBP1Q8NEM2 672 aa21.5■■□□□ 1.03
SYNE2-211ENST00000553801 TRPV1Q8NER1 839 aa21.5■■□□□ 1.03
SYNE2-211ENST00000553801 MOV10L1Q9BXT6 1211 aaKnown RBP21.5■■□□□ 1.03
SYNE2-211ENST00000553801 KBTBD13C9JR72 458 aa21.49■■□□□ 1.03
SYNE2-211ENST00000553801 IGHA2P01877 340 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms