RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 USP17L20D6RJB6 530 aa12.02□□□□□ -0.49
ACTN1-210ENST00000553779 USP17L24Q0WX57 530 aa12.02□□□□□ -0.49
ACTN1-210ENST00000553779 TRIM32Q13049 653 aa12.02□□□□□ -0.49
ACTN1-210ENST00000553779 TTF1Q15361 905 aaPredicted RBP12.02□□□□□ -0.49
ACTN1-210ENST00000553779 DNAJC2Q99543 621 aaKnown RBP12.02□□□□□ -0.49
ACTN1-210ENST00000553779 APBA2Q99767 749 aa12.02□□□□□ -0.49
ACTN1-210ENST00000553779 CRNKL1Q9BZJ0 848 aaKnown RBP12.02□□□□□ -0.49
ACTN1-210ENST00000553779 A0A1W2PPC1 479 aa12.01□□□□□ -0.49
ACTN1-210ENST00000553779 PEX10O60683 326 aa12.01□□□□□ -0.49
ACTN1-210ENST00000553779 HMMRO75330 724 aa12.01□□□□□ -0.49
ACTN1-210ENST00000553779 IFIT2P09913 472 aaKnown RBP12.01□□□□□ -0.49
ACTN1-210ENST00000553779 MS4A1P11836 297 aa12.01□□□□□ -0.49
ACTN1-210ENST00000553779 MFSD14CQ5VZR4 134 aa12.01□□□□□ -0.49
ACTN1-210ENST00000553779 CEP85Q6P2H3 762 aa12.01□□□□□ -0.49
ACTN1-210ENST00000553779 GPR142Q7Z601 462 aa12.01□□□□□ -0.49
ACTN1-210ENST00000553779 AMOTL1Q8IY63 956 aa12.01□□□□□ -0.49
ACTN1-210ENST00000553779 EAF2Q96CJ1 260 aaPredicted RBP12.01□□□□□ -0.49
ACTN1-210ENST00000553779 TXNRD2Q9NNW7 524 aa12.01□□□□□ -0.49
ACTN1-210ENST00000553779 IL1RAPL2Q9NP60 686 aa12.01□□□□□ -0.49
ACTN1-210ENST00000553779 STAP2Q9UGK3 403 aa12.01□□□□□ -0.49
ACTN1-210ENST00000553779 NOP58Q9Y2X3 529 aaKnown RBP12.01□□□□□ -0.49
ACTN1-210ENST00000553779 PARP14Q460N5 1801 aa12□□□□□ -0.49
ACTN1-210ENST00000553779 MYH4Q9Y623 1939 aa12□□□□□ -0.49
ACTN1-210ENST00000553779 RLBP1P12271 317 aa12□□□□□ -0.49
ACTN1-210ENST00000553779 XRCC5P13010 732 aaKnown RBP12□□□□□ -0.49
ACTN1-210ENST00000553779 SYN1P17600 705 aa12□□□□□ -0.49
ACTN1-210ENST00000553779 CNGA1P29973 690 aa12□□□□□ -0.49
ACTN1-210ENST00000553779 JAG1P78504 1218 aa12□□□□□ -0.49
ACTN1-210ENST00000553779 TMED8Q6PL24 325 aaPredicted RBP12□□□□□ -0.49
ACTN1-210ENST00000553779 SAMD1Q6SPF0 538 aaPredicted RBP12□□□□□ -0.49
ACTN1-210ENST00000553779 CLASRPQ8N2M8 674 aaKnown RBP12□□□□□ -0.49
ACTN1-210ENST00000553779 TANGO6Q9C0B7 1094 aa12□□□□□ -0.49
ACTN1-210ENST00000553779 EHD4Q9H223 541 aa12□□□□□ -0.49
ACTN1-210ENST00000553779 PORCNQ9H237 461 aa12□□□□□ -0.49
ACTN1-210ENST00000553779 EMILIN3Q9NT22 766 aa12□□□□□ -0.49
ACTN1-210ENST00000553779 MCM9Q9NXL9 1143 aa12□□□□□ -0.49
ACTN1-210ENST00000553779 GJD2Q9UKL4 321 aa12□□□□□ -0.49
ACTN1-210ENST00000553779 RABGAP1Q9Y3P9 1069 aa12□□□□□ -0.49
ACTN1-210ENST00000553779 LAMA3Q16787 3333 aa11.99□□□□□ -0.49
ACTN1-210ENST00000553779 GOLIM4O00461 696 aa11.99□□□□□ -0.49
ACTN1-210ENST00000553779 VCAM1P19320 739 aa11.99□□□□□ -0.49
ACTN1-210ENST00000553779 ATP2B2Q01814 1243 aa11.99□□□□□ -0.49
ACTN1-210ENST00000553779 SLC9C2Q5TAH2 1124 aa11.99□□□□□ -0.49
ACTN1-210ENST00000553779 METTL16Q86W50 562 aaKnown RBP11.99□□□□□ -0.49
ACTN1-210ENST00000553779 PANK1Q8TE04 598 aa11.99□□□□□ -0.49
ACTN1-210ENST00000553779 DDRGK1Q96HY6 314 aa11.99□□□□□ -0.49
ACTN1-210ENST00000553779 RPAP3Q9H6T3 665 aaPredicted RBP11.99□□□□□ -0.49
ACTN1-210ENST00000553779 ANTXR1Q9H6X2 564 aa11.99□□□□□ -0.49
ACTN1-210ENST00000553779 RBPJLQ9UBG7 517 aa11.99□□□□□ -0.49
ACTN1-210ENST00000553779 SMCHD1A6NHR9 2005 aa11.99□□□□□ -0.49
ACTN1-210ENST00000553779 ZNF236Q9UL36 1845 aa11.98□□□□□ -0.49
ACTN1-210ENST00000553779 A0A0G2JMZ2 1700 aa11.98□□□□□ -0.49
ACTN1-210ENST00000553779 PDE6AP16499 860 aa11.98□□□□□ -0.49
ACTN1-210ENST00000553779 CACNB2Q08289 660 aaPredicted RBP11.98□□□□□ -0.49
ACTN1-210ENST00000553779 MAP2K5Q13163 448 aa11.98□□□□□ -0.49
ACTN1-210ENST00000553779 CCL14Q16627 93 aa11.98□□□□□ -0.49
ACTN1-210ENST00000553779 TATDN1Q6P1N9 297 aa11.98□□□□□ -0.49
ACTN1-210ENST00000553779 UBE2OQ9C0C9 1292 aaKnown RBP11.98□□□□□ -0.49
ACTN1-210ENST00000553779 KIAA1683Q9H0B3 1180 aa11.98□□□□□ -0.49
ACTN1-210ENST00000553779 OGDHLQ9ULD0 1010 aa11.98□□□□□ -0.49
ACTN1-210ENST00000553779 ZNF532Q9HCE3 1301 aa11.97□□□□□ -0.49
ACTN1-210ENST00000553779 RAD21O60216 631 aa11.97□□□□□ -0.49
ACTN1-210ENST00000553779 MYCNP04198 464 aaPredicted RBP11.97□□□□□ -0.49
ACTN1-210ENST00000553779 CCND3P30281 292 aaPredicted RBP11.97□□□□□ -0.49
ACTN1-210ENST00000553779 PLS1Q14651 629 aa11.97□□□□□ -0.49
ACTN1-210ENST00000553779 Q3C1V9 767 aa11.97□□□□□ -0.49
ACTN1-210ENST00000553779 MAP3K21Q5TCX8 1036 aa11.97□□□□□ -0.49
ACTN1-210ENST00000553779 RHPN1Q8TCX5 695 aa11.97□□□□□ -0.49
ACTN1-210ENST00000553779 ACER1Q8TDN7 264 aa11.97□□□□□ -0.49
ACTN1-210ENST00000553779 KIF1BPQ96EK5 621 aa11.97□□□□□ -0.49
ACTN1-210ENST00000553779 EDC3Q96F86 508 aaKnown RBP11.97□□□□□ -0.49
ACTN1-210ENST00000553779 C12orf42Q96LP6 360 aa11.97□□□□□ -0.49
ACTN1-210ENST00000553779 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.97□□□□□ -0.495e-6■■■■■ 34.6
ACTN1-210ENST00000553779 SH2D4AQ9H788 454 aa11.97□□□□□ -0.49
ACTN1-210ENST00000553779 PRKAG2Q9UGJ0 569 aa11.97□□□□□ -0.49
ACTN1-210ENST00000553779 COL6A3P12111 3177 aa11.97□□□□□ -0.49
ACTN1-210ENST00000553779 RLFQ13129 1914 aa11.96□□□□□ -0.49
ACTN1-210ENST00000553779 ZBED9Q6R2W3 1325 aa11.96□□□□□ -0.49
ACTN1-210ENST00000553779 SLC15A5A6NIM6 579 aa11.96□□□□□ -0.49
ACTN1-210ENST00000553779 SHMT1P34896 483 aa11.96□□□□□ -0.49
ACTN1-210ENST00000553779 MAGEA10P43363 369 aaPredicted RBP11.96□□□□□ -0.49
ACTN1-210ENST00000553779 SEPT2Q15019 361 aa11.96□□□□□ -0.49
ACTN1-210ENST00000553779 MORN1Q5T089 497 aa11.96□□□□□ -0.49
ACTN1-210ENST00000553779 CATSPERGQ6ZRH7 1159 aa11.96□□□□□ -0.49
ACTN1-210ENST00000553779 DPP9Q86TI2 863 aa11.96□□□□□ -0.49
ACTN1-210ENST00000553779 LRCH3Q96II8 777 aa11.96□□□□□ -0.49
ACTN1-210ENST00000553779 CHMP4BQ9H444 224 aaKnown RBP11.96□□□□□ -0.49
ACTN1-210ENST00000553779 ARHGEF10LQ9HCE6 1279 aa11.96□□□□□ -0.49
ACTN1-210ENST00000553779 SLC5A4Q9NY91 659 aa11.96□□□□□ -0.49
ACTN1-210ENST00000553779 DDX19BQ9UMR2 479 aa11.96□□□□□ -0.49
ACTN1-210ENST00000553779 MCM3APO60318 1980 aa11.96□□□□□ -0.5
ACTN1-210ENST00000553779 LAMA2P24043 3122 aaKnown RBP11.95□□□□□ -0.5
ACTN1-210ENST00000553779 MYO9BQ13459 2157 aa11.95□□□□□ -0.5
ACTN1-210ENST00000553779 SPDYE16A6NNV3 312 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-210ENST00000553779 MSCO60682 206 aa11.95□□□□□ -0.5
ACTN1-210ENST00000553779 PLCD1P51178 756 aa11.95□□□□□ -0.5
ACTN1-210ENST00000553779 DIEXFQ68CQ4 756 aaKnown RBP11.95□□□□□ -0.5
ACTN1-210ENST00000553779 TMEM179Q6ZVK1 233 aa11.95□□□□□ -0.5
ACTN1-210ENST00000553779 MIER1Q8N108 512 aa11.95□□□□□ -0.5
ACTN1-210ENST00000553779 SLC17A8Q8NDX2 589 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms