RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 YTHDC2Q9H6S0 1430 aaKnown RBP8.67□□□□□ -1.02
ATXN3-223ENST00000553686 PPP4R2Q9NY27 417 aa8.67□□□□□ -1.02
ATXN3-223ENST00000553686 TFCP2L1Q9NZI6 479 aa8.67□□□□□ -1.02
ATXN3-223ENST00000553686 CPDO75976 1380 aa8.66□□□□□ -1.02
ATXN3-223ENST00000553686 TMEM238LA0A1B0GVL6 79 aa8.66□□□□□ -1.02
ATXN3-223ENST00000553686 MAPK8P45983 427 aa8.66□□□□□ -1.02
ATXN3-223ENST00000553686 GRM2Q14416 872 aa8.66□□□□□ -1.02
ATXN3-223ENST00000553686 ENOX2Q16206 610 aaKnown RBP8.66□□□□□ -1.02
ATXN3-223ENST00000553686 RGL3Q3MIN7 710 aa8.66□□□□□ -1.02
ATXN3-223ENST00000553686 PI16Q6UXB8 463 aa8.66□□□□□ -1.02
ATXN3-223ENST00000553686 C16orf71Q8IYS4 520 aaPredicted RBP8.66□□□□□ -1.02
ATXN3-223ENST00000553686 RUSC1Q9BVN2 902 aa8.66□□□□□ -1.02
ATXN3-223ENST00000553686 TRAK1Q9UPV9 953 aa8.66□□□□□ -1.02
ATXN3-223ENST00000553686 CD2APQ9Y5K6 639 aa8.66□□□□□ -1.02
ATXN3-223ENST00000553686 CRB1P82279 1406 aa8.65□□□□□ -1.02
ATXN3-223ENST00000553686 EIF4EBP3O60516 100 aaPredicted RBP8.65□□□□□ -1.02
ATXN3-223ENST00000553686 ITPKAP23677 461 aa8.65□□□□□ -1.02
ATXN3-223ENST00000553686 ITGB7P26010 798 aa8.65□□□□□ -1.02
ATXN3-223ENST00000553686 FSTL1Q12841 308 aa8.65□□□□□ -1.02
ATXN3-223ENST00000553686 ZNF827Q17R98 1081 aa8.65□□□□□ -1.02
ATXN3-223ENST00000553686 USP26Q9BXU7 913 aa8.65□□□□□ -1.02
ATXN3-223ENST00000553686 CEP41Q9BYV8 373 aa8.65□□□□□ -1.02
ATXN3-223ENST00000553686 C14orf93Q9H972 538 aaKnown RBP8.65□□□□□ -1.02
ATXN3-223ENST00000553686 ATP7BP35670 1465 aa8.64□□□□□ -1.03
ATXN3-223ENST00000553686 GCP02774 474 aa8.64□□□□□ -1.03
ATXN3-223ENST00000553686 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.64□□□□□ -1.03
ATXN3-223ENST00000553686 PRPF40BQ6NWY9 871 aaKnown RBP8.64□□□□□ -1.03
ATXN3-223ENST00000553686 GLIS3Q8NEA6 775 aa8.64□□□□□ -1.03
ATXN3-223ENST00000553686 HIRIP3Q9BW71 556 aaPredicted RBP8.64□□□□□ -1.03
ATXN3-223ENST00000553686 RNF208Q9H0X6 261 aa8.64□□□□□ -1.03
ATXN3-223ENST00000553686 ZNF576Q9H609 170 aa8.64□□□□□ -1.03
ATXN3-223ENST00000553686 ABCB6Q9NP58 842 aa8.64□□□□□ -1.03
ATXN3-223ENST00000553686 MEGF11A6BM72 1044 aa8.63□□□□□ -1.03
ATXN3-223ENST00000553686 HSPA1AP0DMV8 641 aaKnown RBP8.63□□□□□ -1.03
ATXN3-223ENST00000553686 HSPA1BP0DMV9 641 aaKnown RBP8.63□□□□□ -1.03
ATXN3-223ENST00000553686 ITGAEP38570 1179 aa8.63□□□□□ -1.03
ATXN3-223ENST00000553686 PTPN12Q05209 780 aaKnown RBP8.63□□□□□ -1.03
ATXN3-223ENST00000553686 PRSS36Q5K4E3 855 aa8.63□□□□□ -1.03
ATXN3-223ENST00000553686 DDX54Q8TDD1 881 aaKnown RBP8.63□□□□□ -1.03
ATXN3-223ENST00000553686 BCO2Q9BYV7 579 aa8.63□□□□□ -1.03
ATXN3-223ENST00000553686 GOLGB1Q14789 3259 aaKnown RBP8.63□□□□□ -1.03
ATXN3-223ENST00000553686 FMN2Q9NZ56 1722 aa8.63□□□□□ -1.03
ATXN3-223ENST00000553686 PRR36Q9H6K5 1346 aa8.62□□□□□ -1.03
ATXN3-223ENST00000553686 LOC100289279A0A1B0GTE1 492 aa8.62□□□□□ -1.03
ATXN3-223ENST00000553686 SART1O43290 800 aaKnown RBP8.62□□□□□ -1.03
ATXN3-223ENST00000553686 DLGAP3O95886 979 aa8.62□□□□□ -1.03
ATXN3-223ENST00000553686 HTRA3P83110 453 aa8.62□□□□□ -1.03
ATXN3-223ENST00000553686 FMR1Q06787 632 aaKnown RBP eCLIP8.62□□□□□ -1.03
ATXN3-223ENST00000553686 EXOSC6Q5RKV6 272 aaKnown RBP8.62□□□□□ -1.03
ATXN3-223ENST00000553686 PRR23CQ6ZRP0 262 aa8.62□□□□□ -1.03
ATXN3-223ENST00000553686 SND1Q7KZF4 910 aaKnown RBP eCLIP8.62□□□□□ -1.03
ATXN3-223ENST00000553686 BRD4O60885 1362 aaPredicted RBP8.61□□□□□ -1.03
ATXN3-223ENST00000553686 PNPLA7Q6ZV29 1317 aa8.61□□□□□ -1.03
ATXN3-223ENST00000553686 ZBTB7CA1YPR0 619 aa8.61□□□□□ -1.03
ATXN3-223ENST00000553686 B3GALT4O96024 378 aa8.61□□□□□ -1.03
ATXN3-223ENST00000553686 CYP11A1P05108 521 aa8.61□□□□□ -1.03
ATXN3-223ENST00000553686 HMGB2P26583 209 aaKnown RBP8.61□□□□□ -1.03
ATXN3-223ENST00000553686 FCGRTP55899 365 aa8.61□□□□□ -1.03
ATXN3-223ENST00000553686 ANKRD34AQ69YU3 496 aa8.61□□□□□ -1.03
ATXN3-223ENST00000553686 NXPE4Q6UWF7 544 aa8.61□□□□□ -1.03
ATXN3-223ENST00000553686 DTHD1Q6ZMT9 781 aa8.61□□□□□ -1.03
ATXN3-223ENST00000553686 C12orf50Q8NA57 414 aaPredicted RBP8.61□□□□□ -1.03
ATXN3-223ENST00000553686 ACSBG1Q96GR2 724 aa8.61□□□□□ -1.03
ATXN3-223ENST00000553686 FAM46AQ96IP4 442 aaKnown RBP8.61□□□□□ -1.03
ATXN3-223ENST00000553686 SETDB2Q96T68 719 aa8.61□□□□□ -1.03
ATXN3-223ENST00000553686 MAOBP27338 520 aa8.6□□□□□ -1.03
ATXN3-223ENST00000553686 ZNF157P51786 506 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-223ENST00000553686 POU4F3Q15319 338 aa8.6□□□□□ -1.03
ATXN3-223ENST00000553686 RPS26P11Q5JNZ5 115 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-223ENST00000553686 ALG1LQ6GMV1 187 aa8.6□□□□□ -1.03
ATXN3-223ENST00000553686 FDX2Q6P4F2 183 aa8.6□□□□□ -1.03
ATXN3-223ENST00000553686 ARMC10Q8N2F6 343 aa8.6□□□□□ -1.03
ATXN3-223ENST00000553686 UTP4Q969X6 686 aaKnown RBP8.6□□□□□ -1.03
ATXN3-223ENST00000553686 TMPRSS13Q9BYE2 586 aa8.6□□□□□ -1.03
ATXN3-223ENST00000553686 ZFYVE1Q9HBF4 777 aa8.6□□□□□ -1.03
ATXN3-223ENST00000553686 CLTCL1P53675 1640 aa8.6□□□□□ -1.03
ATXN3-223ENST00000553686 RGPD3A6NKT7 1758 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-223ENST00000553686 RGPD4Q7Z3J3 1758 aa8.6□□□□□ -1.03
ATXN3-223ENST00000553686 ABCA3Q99758 1704 aa8.6□□□□□ -1.03
ATXN3-223ENST00000553686 WDR17Q8IZU2 1322 aa8.59□□□□□ -1.03
ATXN3-223ENST00000553686 DHX15O43143 795 aaKnown RBP8.59□□□□□ -1.03
ATXN3-223ENST00000553686 FBF1Q8TES7 1133 aa8.59□□□□□ -1.03
ATXN3-223ENST00000553686 NRSN2Q9GZP1 204 aa8.59□□□□□ -1.03
ATXN3-223ENST00000553686 CYP4F12Q9HCS2 524 aa8.59□□□□□ -1.03
ATXN3-223ENST00000553686 STOML1Q9UBI4 398 aa8.59□□□□□ -1.03
ATXN3-223ENST00000553686 AKAP2Q9Y2D5 859 aa8.59□□□□□ -1.03
ATXN3-223ENST00000553686 RAXQ9Y2V3 346 aa8.59□□□□□ -1.03
ATXN3-223ENST00000553686 COL5A2P05997 1499 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-223ENST00000553686 USP19O94966 1318 aa8.58□□□□□ -1.04
ATXN3-223ENST00000553686 P4HBP07237 508 aaKnown RBP8.58□□□□□ -1.04
ATXN3-223ENST00000553686 XRCC5P13010 732 aaKnown RBP8.58□□□□□ -1.04
ATXN3-223ENST00000553686 ATP2B2Q01814 1243 aa8.58□□□□□ -1.04
ATXN3-223ENST00000553686 FAAP100Q0VG06 881 aa8.58□□□□□ -1.04
ATXN3-223ENST00000553686 UVSSAQ2YD98 709 aa8.58□□□□□ -1.04
ATXN3-223ENST00000553686 SMG8Q8ND04 991 aaKnown RBP8.58□□□□□ -1.04
ATXN3-223ENST00000553686 NMRK2Q9NPI5 230 aa8.58□□□□□ -1.04
ATXN3-223ENST00000553686 USP6P35125 1406 aa8.57□□□□□ -1.04
ATXN3-223ENST00000553686 PREPP48147 710 aa8.57□□□□□ -1.04
ATXN3-223ENST00000553686 FLAD1Q8NFF5 587 aa8.57□□□□□ -1.04
ATXN3-223ENST00000553686 MYRFLQ96LU7 910 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 164.1 ms