RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 PRDM5Q9NQX1 630 aaPredicted RBP11.91□□□□□ -0.5
CHD8-205ENST00000553651 MYO9BQ13459 2157 aa11.91□□□□□ -0.5
CHD8-205ENST00000553651 DNAJB2P25686 324 aa11.9□□□□□ -0.5
CHD8-205ENST00000553651 HOXD11P31277 338 aaPredicted RBP11.9□□□□□ -0.5
CHD8-205ENST00000553651 ADCYAP1R1P41586 468 aa11.9□□□□□ -0.5
CHD8-205ENST00000553651 GSTO1P78417 241 aa11.9□□□□□ -0.5
CHD8-205ENST00000553651 TLE2Q04725 743 aa11.9□□□□□ -0.5
CHD8-205ENST00000553651 LRRC41Q15345 812 aa11.9□□□□□ -0.5
CHD8-205ENST00000553651 ANO1Q5XXA6 986 aa11.9□□□□□ -0.5
CHD8-205ENST00000553651 OLFML2BQ68BL8 750 aa11.9□□□□□ -0.5
CHD8-205ENST00000553651 CATSPERGQ6ZRH7 1159 aa11.9□□□□□ -0.5
CHD8-205ENST00000553651 FOXP4Q8IVH2 680 aaPredicted RBP11.9□□□□□ -0.5
CHD8-205ENST00000553651 ARRDC4Q8NCT1 418 aa11.9□□□□□ -0.5
CHD8-205ENST00000553651 RNPC3Q96LT9 517 aaKnown RBP11.9□□□□□ -0.5
CHD8-205ENST00000553651 FLT1P17948 1338 aa11.89□□□□□ -0.51
CHD8-205ENST00000553651 USP17L15C9J2P7 530 aa11.89□□□□□ -0.51
CHD8-205ENST00000553651 USP17L13C9JLJ4 530 aa11.89□□□□□ -0.51
CHD8-205ENST00000553651 USP17L11C9JVI0 530 aa11.89□□□□□ -0.51
CHD8-205ENST00000553651 USP17L18D6R9N7 530 aa11.89□□□□□ -0.51
CHD8-205ENST00000553651 USP17L22D6RA61 530 aa11.89□□□□□ -0.51
CHD8-205ENST00000553651 USP17L17D6RBQ6 530 aa11.89□□□□□ -0.51
CHD8-205ENST00000553651 USP17L19D6RCP7 530 aa11.89□□□□□ -0.51
CHD8-205ENST00000553651 USP17L20D6RJB6 530 aa11.89□□□□□ -0.51
CHD8-205ENST00000553651 KIAA0355O15063 1070 aa11.89□□□□□ -0.51
CHD8-205ENST00000553651 SEPT4O43236 478 aa11.89□□□□□ -0.51
CHD8-205ENST00000553651 GLRX3O76003 335 aaKnown RBP11.89□□□□□ -0.51
CHD8-205ENST00000553651 ARID4AP29374 1257 aaPredicted RBP11.89□□□□□ -0.51
CHD8-205ENST00000553651 PPP4CP60510 307 aa11.89□□□□□ -0.51
CHD8-205ENST00000553651 CCNA1P78396 465 aa11.89□□□□□ -0.51
CHD8-205ENST00000553651 USP17L24Q0WX57 530 aa11.89□□□□□ -0.51
CHD8-205ENST00000553651 TFCP2Q12800 502 aa11.89□□□□□ -0.51
CHD8-205ENST00000553651 MVPQ14764 893 aaKnown RBP11.89□□□□□ -0.51
CHD8-205ENST00000553651 ADGRA1Q86SQ6 560 aa11.89□□□□□ -0.51
CHD8-205ENST00000553651 SPATA5Q8NB90 893 aa11.89□□□□□ -0.51
CHD8-205ENST00000553651 ATXN2LQ8WWM7 1075 aaKnown RBP11.89□□□□□ -0.51
CHD8-205ENST00000553651 PALD1Q9ULE6 856 aa11.89□□□□□ -0.51
CHD8-205ENST00000553651 SMCHD1A6NHR9 2005 aa11.89□□□□□ -0.51
CHD8-205ENST00000553651 PIEZO1Q92508 2521 aa11.88□□□□□ -0.51
CHD8-205ENST00000553651 SPDYE16A6NNV3 312 aaPredicted RBP11.88□□□□□ -0.51
CHD8-205ENST00000553651 KBTBD13C9JR72 458 aa11.88□□□□□ -0.51
CHD8-205ENST00000553651 COBLO75128 1261 aa11.88□□□□□ -0.51
CHD8-205ENST00000553651 UBTFL1P0CB47 393 aaPredicted RBP11.88□□□□□ -0.51
CHD8-205ENST00000553651 VCAM1P19320 739 aa11.88□□□□□ -0.51
CHD8-205ENST00000553651 MCAMP43121 646 aa11.88□□□□□ -0.51
CHD8-205ENST00000553651 MAPKAPK5Q8IW41 473 aa11.88□□□□□ -0.51
CHD8-205ENST00000553651 TGFBRAP1Q8WUH2 860 aa11.88□□□□□ -0.51
CHD8-205ENST00000553651 FERMT2Q96AC1 680 aa11.88□□□□□ -0.51
CHD8-205ENST00000553651 ASB2Q96Q27 587 aa11.88□□□□□ -0.51
CHD8-205ENST00000553651 ZNF576Q9H609 170 aa11.88□□□□□ -0.51
CHD8-205ENST00000553651 PHF24Q9UPV7 400 aa11.88□□□□□ -0.51
CHD8-205ENST00000553651 A0A0G2JMZ2 1700 aa11.87□□□□□ -0.51
CHD8-205ENST00000553651 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.87□□□□□ -0.51
CHD8-205ENST00000553651 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.87□□□□□ -0.51
CHD8-205ENST00000553651 GH2P01242 217 aa11.87□□□□□ -0.51
CHD8-205ENST00000553651 ADORA2AP29274 412 aa11.87□□□□□ -0.51
CHD8-205ENST00000553651 MAP3K12Q12852 859 aa11.87□□□□□ -0.51
CHD8-205ENST00000553651 ZYXQ15942 572 aaKnown RBP11.87□□□□□ -0.51
CHD8-205ENST00000553651 FAM47AQ5JRC9 791 aa11.87□□□□□ -0.51
CHD8-205ENST00000553651 PRAMEF19Q5SWL8 479 aa11.87□□□□□ -0.51
CHD8-205ENST00000553651 WDR78Q5VTH9 848 aa11.87□□□□□ -0.51
CHD8-205ENST00000553651 TATDN1Q6P1N9 297 aa11.87□□□□□ -0.51
CHD8-205ENST00000553651 ACER1Q8TDN7 264 aa11.87□□□□□ -0.51
CHD8-205ENST00000553651 ADAMTS19Q8TE59 1207 aa11.87□□□□□ -0.51
CHD8-205ENST00000553651 FAM122AQ96E09 287 aa11.87□□□□□ -0.51
CHD8-205ENST00000553651 KIAA1683Q9H0B3 1180 aa11.87□□□□□ -0.51
CHD8-205ENST00000553651 CWC22Q9HCG8 908 aaKnown RBP11.87□□□□□ -0.51
CHD8-205ENST00000553651 AATFQ9NY61 560 aaKnown RBP eCLIP11.87□□□□□ -0.51
CHD8-205ENST00000553651 RAI14Q9P0K7 980 aa11.87□□□□□ -0.51
CHD8-205ENST00000553651 TACC3Q9Y6A5 838 aa11.87□□□□□ -0.51
CHD8-205ENST00000553651 CLTBP09497 229 aa11.86□□□□□ -0.51
CHD8-205ENST00000553651 ADGRE1Q14246 886 aa11.86□□□□□ -0.51
CHD8-205ENST00000553651 AKNAD1Q5T1N1 836 aa11.86□□□□□ -0.51
CHD8-205ENST00000553651 RASIP1Q5U651 963 aa11.86□□□□□ -0.51
CHD8-205ENST00000553651 MOV10L1Q9BXT6 1211 aaKnown RBP11.86□□□□□ -0.51
CHD8-205ENST00000553651 MRS2Q9HD23 443 aa11.86□□□□□ -0.51
CHD8-205ENST00000553651 THEGQ9P2T0 379 aa11.86□□□□□ -0.51
CHD8-205ENST00000553651 AKAP2Q9Y2D5 859 aa11.86□□□□□ -0.51
CHD8-205ENST00000553651 IVNS1ABPQ9Y6Y0 642 aa11.86□□□□□ -0.51
CHD8-205ENST00000553651 MYO5AQ9Y4I1 1855 aaKnown RBP11.86□□□□□ -0.51
CHD8-205ENST00000553651 XIRP2A4UGR9 3374 aa11.85□□□□□ -0.51
CHD8-205ENST00000553651 TRANK1O15050 2925 aa11.85□□□□□ -0.51
CHD8-205ENST00000553651 GUCY1A2P33402 732 aa11.85□□□□□ -0.51
CHD8-205ENST00000553651 FPGSQ05932 587 aa11.85□□□□□ -0.51
CHD8-205ENST00000553651 C16orf59Q7L2K0 433 aa11.85□□□□□ -0.51
CHD8-205ENST00000553651 CRACR2BQ8N4Y2 399 aaPredicted RBP11.85□□□□□ -0.51
CHD8-205ENST00000553651 TIFAQ96CG3 184 aa11.85□□□□□ -0.51
CHD8-205ENST00000553651 UHRF1Q96T88 793 aaPredicted RBP11.85□□□□□ -0.51
CHD8-205ENST00000553651 SAP30BPQ9UHR5 308 aaKnown RBP11.85□□□□□ -0.51
CHD8-205ENST00000553651 PLXNA1Q9UIW2 1896 aa11.85□□□□□ -0.51
CHD8-205ENST00000553651 SYNGAP1Q96PV0 1343 aa11.85□□□□□ -0.51
CHD8-205ENST00000553651 STRNO43815 780 aa11.84□□□□□ -0.51
CHD8-205ENST00000553651 PLCG2P16885 1265 aa11.84□□□□□ -0.51
CHD8-205ENST00000553651 PBX2P40425 430 aa11.84□□□□□ -0.51
CHD8-205ENST00000553651 MRPS5P82675 430 aaKnown RBP11.84□□□□□ -0.51
CHD8-205ENST00000553651 FAAP100Q0VG06 881 aa11.84□□□□□ -0.51
CHD8-205ENST00000553651 MTX1Q13505 466 aa11.84□□□□□ -0.51
CHD8-205ENST00000553651 NAA16Q6N069 864 aaPredicted RBP11.84□□□□□ -0.51
CHD8-205ENST00000553651 DPP9Q86TI2 863 aa11.84□□□□□ -0.51
CHD8-205ENST00000553651 SHCBP1Q8NEM2 672 aa11.84□□□□□ -0.51
CHD8-205ENST00000553651 MEIS3Q99687 375 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms