RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 EYSQ5T1H1 3165 aa7.35□□□□□ -1.23
SMARCE1P3-201ENST00000553649 SIPA1L3O60292 1781 aaPredicted RBP7.35□□□□□ -1.23
SMARCE1P3-201ENST00000553649 GPR37L1O60883 481 aa7.34□□□□□ -1.23
SMARCE1P3-201ENST00000553649 STAU1O95793 577 aaKnown RBP7.34□□□□□ -1.23
SMARCE1P3-201ENST00000553649 ARAFP10398 606 aa7.34□□□□□ -1.23
SMARCE1P3-201ENST00000553649 MYL6BP14649 208 aa7.34□□□□□ -1.23
SMARCE1P3-201ENST00000553649 RPS12P25398 132 aaKnown RBP7.34□□□□□ -1.23
SMARCE1P3-201ENST00000553649 PTPN12Q05209 780 aaKnown RBP7.34□□□□□ -1.23
SMARCE1P3-201ENST00000553649 PRAMEF18Q5VWM3 479 aa7.34□□□□□ -1.23
SMARCE1P3-201ENST00000553649 TRIM11Q96F44 468 aa7.34□□□□□ -1.23
SMARCE1P3-201ENST00000553649 TMX4Q9H1E5 349 aaPredicted RBP7.34□□□□□ -1.23
SMARCE1P3-201ENST00000553649 DNAAF2Q9NVR5 837 aaKnown RBP7.34□□□□□ -1.23
SMARCE1P3-201ENST00000553649 SCAF8Q9UPN6 1271 aaKnown RBP7.34□□□□□ -1.23
SMARCE1P3-201ENST00000553649 NUDCQ9Y266 331 aa7.34□□□□□ -1.23
SMARCE1P3-201ENST00000553649 RTL9Q8NET4 1388 aa7.33□□□□□ -1.24
SMARCE1P3-201ENST00000553649 KDM3BQ7LBC6 1761 aa7.33□□□□□ -1.24
SMARCE1P3-201ENST00000553649 IRS2Q9Y4H2 1338 aa7.33□□□□□ -1.24
SMARCE1P3-201ENST00000553649 GJA8P48165 433 aa7.33□□□□□ -1.24
SMARCE1P3-201ENST00000553649 TAF7Q15545 349 aaPredicted RBP7.33□□□□□ -1.24
SMARCE1P3-201ENST00000553649 RSPO4Q2I0M5 234 aaPredicted RBP7.33□□□□□ -1.24
SMARCE1P3-201ENST00000553649 FAM109BQ6ICB4 259 aaPredicted RBP7.33□□□□□ -1.24
SMARCE1P3-201ENST00000553649 DPP8Q6V1X1 898 aaPredicted RBP7.33□□□□□ -1.24
SMARCE1P3-201ENST00000553649 TTLL7Q6ZT98 887 aa7.33□□□□□ -1.24
SMARCE1P3-201ENST00000553649 CHSY3Q70JA7 882 aa7.33□□□□□ -1.24
SMARCE1P3-201ENST00000553649 RBM17Q96I25 401 aaKnown RBP7.33□□□□□ -1.24
SMARCE1P3-201ENST00000553649 KCNQ5Q9NR82 932 aa7.33□□□□□ -1.24
SMARCE1P3-201ENST00000553649 ABCC4O15439 1325 aa7.32□□□□□ -1.24
SMARCE1P3-201ENST00000553649 MAP3K15Q6ZN16 1313 aa7.32□□□□□ -1.24
SMARCE1P3-201ENST00000553649 UBN2Q6ZU65 1347 aa7.32□□□□□ -1.24
SMARCE1P3-201ENST00000553649 MANSC4A6NHS7 340 aaPredicted RBP7.32□□□□□ -1.24
SMARCE1P3-201ENST00000553649 ERVV-1B6SEH8 477 aa7.32□□□□□ -1.24
SMARCE1P3-201ENST00000553649 INHBEP58166 350 aa7.32□□□□□ -1.24
SMARCE1P3-201ENST00000553649 EFHC2Q5JST6 749 aa7.32□□□□□ -1.24
SMARCE1P3-201ENST00000553649 LDLRAD1Q5T700 205 aa7.32□□□□□ -1.24
SMARCE1P3-201ENST00000553649 SUSD4Q5VX71 490 aa7.32□□□□□ -1.24
SMARCE1P3-201ENST00000553649 TDHQ8IZJ6 230 aa7.32□□□□□ -1.24
SMARCE1P3-201ENST00000553649 PGBD3Q8N328 593 aa7.32□□□□□ -1.24
SMARCE1P3-201ENST00000553649 MAFAQ8NHW3 353 aaPredicted RBP7.32□□□□□ -1.24
SMARCE1P3-201ENST00000553649 ZNF428Q96B54 188 aa7.32□□□□□ -1.24
SMARCE1P3-201ENST00000553649 CCDC85AQ96PX6 553 aaPredicted RBP7.32□□□□□ -1.24
SMARCE1P3-201ENST00000553649 THUMPD2Q9BTF0 503 aaKnown RBP7.32□□□□□ -1.24
SMARCE1P3-201ENST00000553649 CRISPLD1Q9H336 500 aa7.32□□□□□ -1.24
SMARCE1P3-201ENST00000553649 NOP53Q9NZM5 478 aaKnown RBP7.32□□□□□ -1.24
SMARCE1P3-201ENST00000553649 PIEZO1Q92508 2521 aa7.31□□□□□ -1.24
SMARCE1P3-201ENST00000553649 FARP2O94887 1054 aaPredicted RBP7.31□□□□□ -1.24
SMARCE1P3-201ENST00000553649 NTSR2O95665 410 aa7.31□□□□□ -1.24
SMARCE1P3-201ENST00000553649 GJB1P08034 283 aa7.31□□□□□ -1.24
SMARCE1P3-201ENST00000553649 ZNF280AP59817 542 aaPredicted RBP7.31□□□□□ -1.24
SMARCE1P3-201ENST00000553649 NR1H3Q13133 447 aa7.31□□□□□ -1.24
SMARCE1P3-201ENST00000553649 TCIRG1Q13488 830 aa7.31□□□□□ -1.24
SMARCE1P3-201ENST00000553649 GNASQ5JWF2 1037 aa7.31□□□□□ -1.24
SMARCE1P3-201ENST00000553649 NKAPLQ5M9Q1 402 aa7.31□□□□□ -1.24
SMARCE1P3-201ENST00000553649 SLC10A5Q5PT55 438 aa7.31□□□□□ -1.24
SMARCE1P3-201ENST00000553649 TMEM214Q6NUQ4 689 aaKnown RBP7.31□□□□□ -1.24
SMARCE1P3-201ENST00000553649 FCHSD1Q86WN1 690 aa7.31□□□□□ -1.24
SMARCE1P3-201ENST00000553649 SP8Q8IXZ3 490 aa7.31□□□□□ -1.24
SMARCE1P3-201ENST00000553649 FAM161BQ96MY7 647 aa7.31□□□□□ -1.24
SMARCE1P3-201ENST00000553649 KRTAP9-9Q9BYP9 154 aa7.31□□□□□ -1.24
SMARCE1P3-201ENST00000553649 KRTAP9-4Q9BYQ2 154 aa7.31□□□□□ -1.24
SMARCE1P3-201ENST00000553649 ZCCHC2Q9C0B9 1178 aaKnown RBP7.31□□□□□ -1.24
SMARCE1P3-201ENST00000553649 PRUNE2Q8WUY3 3088 aa7.31□□□□□ -1.24
SMARCE1P3-201ENST00000553649 LRRC37AA6NMS7 1700 aa7.3□□□□□ -1.24
SMARCE1P3-201ENST00000553649 SSC5DA1L4H1 1573 aa7.3□□□□□ -1.24
SMARCE1P3-201ENST00000553649 PIK3R2O00459 728 aa7.3□□□□□ -1.24
SMARCE1P3-201ENST00000553649 BBOX1O75936 387 aa7.3□□□□□ -1.24
SMARCE1P3-201ENST00000553649 NEFMP07197 916 aa7.3□□□□□ -1.24
SMARCE1P3-201ENST00000553649 EIF2S2P20042 333 aaKnown RBP7.3□□□□□ -1.24
SMARCE1P3-201ENST00000553649 PPP2R1AP30153 589 aa7.3□□□□□ -1.24
SMARCE1P3-201ENST00000553649 GATA4P43694 442 aa7.3□□□□□ -1.24
SMARCE1P3-201ENST00000553649 PCMTD1Q96MG8 357 aaPredicted RBP7.3□□□□□ -1.24
SMARCE1P3-201ENST00000553649 CDX2Q99626 313 aaPredicted RBP7.3□□□□□ -1.24
SMARCE1P3-201ENST00000553649 PTPN18Q99952 460 aa7.3□□□□□ -1.24
SMARCE1P3-201ENST00000553649 DBNDD1Q9H9R9 158 aa7.3□□□□□ -1.24
SMARCE1P3-201ENST00000553649 LAMA2P24043 3122 aaKnown RBP7.3□□□□□ -1.24
SMARCE1P3-201ENST00000553649 LAMB1P07942 1786 aa7.29□□□□□ -1.24
SMARCE1P3-201ENST00000553649 HTATSF1O43719 755 aaKnown RBP7.29□□□□□ -1.24
SMARCE1P3-201ENST00000553649 ANXA1P04083 346 aa7.29□□□□□ -1.24
SMARCE1P3-201ENST00000553649 VIL1P09327 827 aaKnown RBP7.29□□□□□ -1.24
SMARCE1P3-201ENST00000553649 ZBTB48P10074 688 aaPredicted RBP7.29□□□□□ -1.24
SMARCE1P3-201ENST00000553649 HCLS1P14317 486 aaPredicted RBP7.29□□□□□ -1.24
SMARCE1P3-201ENST00000553649 EIF4A1P60842 406 aaKnown RBP7.29□□□□□ -1.24
SMARCE1P3-201ENST00000553649 TSGA10IPQ3SY00 556 aa7.29□□□□□ -1.24
SMARCE1P3-201ENST00000553649 PPP1R42Q7Z4L9 355 aa7.29□□□□□ -1.24
SMARCE1P3-201ENST00000553649 ZNF34Q8IZ26 560 aa7.29□□□□□ -1.24
SMARCE1P3-201ENST00000553649 PNISRQ8TF01 805 aaKnown RBP7.29□□□□□ -1.24
SMARCE1P3-201ENST00000553649 WNK4Q96J92 1243 aa7.29□□□□□ -1.24
SMARCE1P3-201ENST00000553649 UTP14AQ9BVJ6 771 aaKnown RBP7.29□□□□□ -1.24
SMARCE1P3-201ENST00000553649 ARHGAP39Q9C0H5 1083 aa7.29□□□□□ -1.24
SMARCE1P3-201ENST00000553649 ZMYND8Q9ULU4 1186 aaPredicted RBP7.29□□□□□ -1.24
SMARCE1P3-201ENST00000553649 CCL5P13501 91 aa7.28□□□□□ -1.24
SMARCE1P3-201ENST00000553649 ATP4AP20648 1035 aa7.28□□□□□ -1.24
SMARCE1P3-201ENST00000553649 MAGEA10P43363 369 aaPredicted RBP7.28□□□□□ -1.24
SMARCE1P3-201ENST00000553649 MCCD1P59942 119 aaPredicted RBP7.28□□□□□ -1.24
SMARCE1P3-201ENST00000553649 AIMP1Q12904 312 aaKnown RBP7.28□□□□□ -1.24
SMARCE1P3-201ENST00000553649 PRKG1Q13976 671 aa7.28□□□□□ -1.24
SMARCE1P3-201ENST00000553649 ARHGEF6Q15052 776 aa7.28□□□□□ -1.24
SMARCE1P3-201ENST00000553649 TMC4Q7Z404 712 aa7.28□□□□□ -1.24
SMARCE1P3-201ENST00000553649 U2AF1L4Q8WU68 220 aaKnown RBP7.28□□□□□ -1.24
SMARCE1P3-201ENST00000553649 GMLQ99445 158 aa7.28□□□□□ -1.24
SMARCE1P3-201ENST00000553649 PLVAPQ9BX97 442 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms