RNA–Protein interactions for RNA: ENST00000553609.5

NEDD1-205, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-205ENST00000553609 SSH3Q8TE77 659 aa17.39■□□□□ 0.37
NEDD1-205ENST00000553609 TLR7Q9NYK1 1049 aaKnown RBP17.39■□□□□ 0.37
NEDD1-205ENST00000553609 DBNLQ9UJU6 430 aaKnown RBP17.39■□□□□ 0.37
NEDD1-205ENST00000553609 BCAR3O75815 825 aa17.38■□□□□ 0.37
NEDD1-205ENST00000553609 HLA-DOAP06340 250 aa17.38■□□□□ 0.37
NEDD1-205ENST00000553609 HOXC6P09630 235 aa17.38■□□□□ 0.37
NEDD1-205ENST00000553609 MDM2Q00987 491 aaPredicted RBP17.38■□□□□ 0.37
NEDD1-205ENST00000553609 CCDC158Q5M9N0 1113 aa17.38■□□□□ 0.37
NEDD1-205ENST00000553609 LBX2Q6XYB7 198 aa17.38■□□□□ 0.37
NEDD1-205ENST00000553609 TRIM34Q9BYJ4 488 aa17.38■□□□□ 0.37
NEDD1-205ENST00000553609 NDUFB9Q9Y6M9 179 aa17.38■□□□□ 0.37
NEDD1-205ENST00000553609 USP17L15C9J2P7 530 aa17.37■□□□□ 0.37
NEDD1-205ENST00000553609 USP17L13C9JLJ4 530 aa17.37■□□□□ 0.37
NEDD1-205ENST00000553609 USP17L11C9JVI0 530 aa17.37■□□□□ 0.37
NEDD1-205ENST00000553609 USP17L18D6R9N7 530 aa17.37■□□□□ 0.37
NEDD1-205ENST00000553609 USP17L22D6RA61 530 aa17.37■□□□□ 0.37
NEDD1-205ENST00000553609 USP17L17D6RBQ6 530 aa17.37■□□□□ 0.37
NEDD1-205ENST00000553609 USP17L19D6RCP7 530 aa17.37■□□□□ 0.37
NEDD1-205ENST00000553609 USP17L20D6RJB6 530 aa17.37■□□□□ 0.37
NEDD1-205ENST00000553609 POTEB2H3BUK9 544 aa17.37■□□□□ 0.37
NEDD1-205ENST00000553609 VCAM1P19320 739 aa17.37■□□□□ 0.37
NEDD1-205ENST00000553609 CYP7A1P22680 504 aa17.37■□□□□ 0.37
NEDD1-205ENST00000553609 PTPREP23469 700 aa17.37■□□□□ 0.37
NEDD1-205ENST00000553609 USP17L24Q0WX57 530 aa17.37■□□□□ 0.37
NEDD1-205ENST00000553609 ZYXQ15942 572 aaKnown RBP17.37■□□□□ 0.37
NEDD1-205ENST00000553609 CATSPERGQ6ZRH7 1159 aa17.37■□□□□ 0.37
NEDD1-205ENST00000553609 CCAR1Q8IX12 1150 aaKnown RBP17.37■□□□□ 0.37
NEDD1-205ENST00000553609 ACER1Q8TDN7 264 aa17.37■□□□□ 0.37
NEDD1-205ENST00000553609 CLUAP1Q96AJ1 413 aa17.37■□□□□ 0.37
NEDD1-205ENST00000553609 EDC3Q96F86 508 aaKnown RBP17.37■□□□□ 0.37
NEDD1-205ENST00000553609 KIAA1683Q9H0B3 1180 aa17.37■□□□□ 0.37
NEDD1-205ENST00000553609 EHD4Q9H223 541 aa17.37■□□□□ 0.37
NEDD1-205ENST00000553609 BTBD7Q9P203 1132 aa17.37■□□□□ 0.37
NEDD1-205ENST00000553609 CDH23Q9H251 3354 aa17.37■□□□□ 0.37
NEDD1-205ENST00000553609 SLC15A5A6NIM6 579 aa17.36■□□□□ 0.37
NEDD1-205ENST00000553609 IPO8O15397 1037 aaKnown RBP17.36■□□□□ 0.37
NEDD1-205ENST00000553609 GRB14Q14449 540 aa17.36■□□□□ 0.37
NEDD1-205ENST00000553609 FAM109BQ6ICB4 259 aaPredicted RBP17.36■□□□□ 0.37
NEDD1-205ENST00000553609 TMEM57Q8N5G2 664 aa17.36■□□□□ 0.37
NEDD1-205ENST00000553609 MIGA1Q8NAN2 632 aa17.36■□□□□ 0.37
NEDD1-205ENST00000553609 TRPV1Q8NER1 839 aa17.36■□□□□ 0.37
NEDD1-205ENST00000553609 GUCD1Q96NT3 240 aa17.36■□□□□ 0.37
NEDD1-205ENST00000553609 DDX20Q9UHI6 824 aaKnown RBP17.36■□□□□ 0.37
NEDD1-205ENST00000553609 SERPINB13Q9UIV8 391 aa17.36■□□□□ 0.37
NEDD1-205ENST00000553609 SPDYE16A6NNV3 312 aaPredicted RBP17.35■□□□□ 0.37
NEDD1-205ENST00000553609 CCNA1P78396 465 aa17.35■□□□□ 0.37
NEDD1-205ENST00000553609 NPLOC4Q8TAT6 608 aa17.35■□□□□ 0.37
NEDD1-205ENST00000553609 FRAT1Q92837 279 aaPredicted RBP17.35■□□□□ 0.37
NEDD1-205ENST00000553609 FEZ1Q99689 392 aa17.35■□□□□ 0.37
NEDD1-205ENST00000553609 SENP6Q9GZR1 1112 aaPredicted RBP17.35■□□□□ 0.37
NEDD1-205ENST00000553609 NOP58Q9Y2X3 529 aaKnown RBP17.35■□□□□ 0.37
NEDD1-205ENST00000553609 MYH1P12882 1939 aa17.35■□□□□ 0.37
NEDD1-205ENST00000553609 GUCY1A2P33402 732 aa17.34■□□□□ 0.37
NEDD1-205ENST00000553609 SHMT1P34896 483 aa17.34■□□□□ 0.37
NEDD1-205ENST00000553609 ATP8B2P98198 1209 aa17.34■□□□□ 0.37
NEDD1-205ENST00000553609 LTBP2Q14767 1821 aa17.34■□□□□ 0.37
NEDD1-205ENST00000553609 MFSD14CQ5VZR4 134 aa17.34■□□□□ 0.37
NEDD1-205ENST00000553609 LPAR1Q92633 364 aa17.34■□□□□ 0.37
NEDD1-205ENST00000553609 EAF2Q96CJ1 260 aaPredicted RBP17.34■□□□□ 0.37
NEDD1-205ENST00000553609 PRUNE2Q8WUY3 3088 aa17.34■□□□□ 0.37
NEDD1-205ENST00000553609 ZNF236Q9UL36 1845 aa17.33■□□□□ 0.37
NEDD1-205ENST00000553609 SURF6O75683 361 aaKnown RBP17.33■□□□□ 0.36
NEDD1-205ENST00000553609 IDH1O75874 414 aaKnown RBP17.33■□□□□ 0.36
NEDD1-205ENST00000553609 GLRX3O76003 335 aaKnown RBP17.33■□□□□ 0.36
NEDD1-205ENST00000553609 CYBAP13498 195 aa17.33■□□□□ 0.36
NEDD1-205ENST00000553609 CYP2C19P33261 490 aa17.33■□□□□ 0.36
NEDD1-205ENST00000553609 USP14P54578 494 aa17.33■□□□□ 0.36
NEDD1-205ENST00000553609 RAB3GAP1Q15042 981 aa17.33■□□□□ 0.36
NEDD1-205ENST00000553609 COL25A1Q9BXS0 654 aaPredicted RBP17.33■□□□□ 0.36
NEDD1-205ENST00000553609 CCDC8Q9H0W5 538 aaPredicted RBP17.33■□□□□ 0.36
NEDD1-205ENST00000553609 ANTXR1Q9H6X2 564 aa17.33■□□□□ 0.36
NEDD1-205ENST00000553609 A0A0G2JMZ2 1700 aa17.33■□□□□ 0.36
NEDD1-205ENST00000553609 DNM1LO00429 736 aa17.32■□□□□ 0.36
NEDD1-205ENST00000553609 MSCO60682 206 aa17.32■□□□□ 0.36
NEDD1-205ENST00000553609 USP5P45974 858 aa17.32■□□□□ 0.36
NEDD1-205ENST00000553609 PLCD1P51178 756 aa17.32■□□□□ 0.36
NEDD1-205ENST00000553609 ATN1P54259 1190 aaPredicted RBP17.32■□□□□ 0.36
NEDD1-205ENST00000553609 EVX2Q03828 476 aa17.32■□□□□ 0.36
NEDD1-205ENST00000553609 GABPAQ06546 454 aa17.32■□□□□ 0.36
NEDD1-205ENST00000553609 OS9Q13438 667 aaPredicted RBP17.32■□□□□ 0.36
NEDD1-205ENST00000553609 ABCB5Q2M3G0 1257 aa17.32■□□□□ 0.36
NEDD1-205ENST00000553609 CERKLQ49MI3 558 aaPredicted RBP17.32■□□□□ 0.36
NEDD1-205ENST00000553609 WDR78Q5VTH9 848 aa17.32■□□□□ 0.36
NEDD1-205ENST00000553609 CERS3Q8IU89 383 aa17.32■□□□□ 0.36
NEDD1-205ENST00000553609 MAGEB6Q8N7X4 407 aa17.32■□□□□ 0.36
NEDD1-205ENST00000553609 RIOK1Q9BRS2 568 aaKnown RBP17.32■□□□□ 0.36
NEDD1-205ENST00000553609 RPAP3Q9H6T3 665 aaPredicted RBP17.32■□□□□ 0.36
NEDD1-205ENST00000553609 C1orf115Q9H7X2 142 aa17.32■□□□□ 0.36
NEDD1-205ENST00000553609 CWC22Q9HCG8 908 aaKnown RBP17.32■□□□□ 0.36
NEDD1-205ENST00000553609 RLFQ13129 1914 aa17.31■□□□□ 0.36
NEDD1-205ENST00000553609 A0A1W2PRG0 241 aa17.3■□□□□ 0.36
NEDD1-205ENST00000553609 RTP1P59025 263 aa17.3■□□□□ 0.36
NEDD1-205ENST00000553609 ATP2B2Q01814 1243 aa17.3■□□□□ 0.36
NEDD1-205ENST00000553609 TTC6Q86TZ1 520 aa17.3■□□□□ 0.36
NEDD1-205ENST00000553609 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.3■□□□□ 0.36
NEDD1-205ENST00000553609 MOV10L1Q9BXT6 1211 aaKnown RBP17.3■□□□□ 0.36
NEDD1-205ENST00000553609 IVNS1ABPQ9Y6Y0 642 aa17.3■□□□□ 0.36
NEDD1-205ENST00000553609 CNGA1P29973 690 aa17.29■□□□□ 0.36
NEDD1-205ENST00000553609 SEPT2Q15019 361 aa17.29■□□□□ 0.36
NEDD1-205ENST00000553609 OLFML2BQ68BL8 750 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms